RNA–Protein interactions for RNA: ENST00000589166.1

SLC39A3-204, Transcript of solute carrier family 39 member 3, humanhuman

TSL 2

Gene SLC39A3, Length 491 nt, Biotype protein coding, Subcellular localisation Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A3-204ENST00000589166 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
SLC39A3-204ENST00000589166 ABCC9O60706 1549 aa22.01■■□□□ 1.11
SLC39A3-204ENST00000589166 CCDC180Q9P1Z9 1646 aa21.98■■□□□ 1.11
SLC39A3-204ENST00000589166 RB1CC1Q8TDY2 1594 aa20.96■□□□□ 0.95
SLC39A3-204ENST00000589166 NACADO15069 1562 aa20.8■□□□□ 0.92
SLC39A3-204ENST00000589166 DNAJC5BQ9UF47 199 aa20.8■□□□□ 0.92
SLC39A3-204ENST00000589166 DCAF8L2P0C7V8 631 aa20.59■□□□□ 0.89
SLC39A3-204ENST00000589166 UNC13AQ9UPW8 1703 aa20.53■□□□□ 0.88
SLC39A3-204ENST00000589166 MYO15BQ96JP2 1530 aa20.52■□□□□ 0.87
SLC39A3-204ENST00000589166 PABPN1Q86U42 306 aaKnown RBP eCLIP20.47■□□□□ 0.87
SLC39A3-204ENST00000589166 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
SLC39A3-204ENST00000589166 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
SLC39A3-204ENST00000589166 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
SLC39A3-204ENST00000589166 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
SLC39A3-204ENST00000589166 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
SLC39A3-204ENST00000589166 CC2D2AQ9P2K1 1620 aa19.93■□□□□ 0.78
SLC39A3-204ENST00000589166 CECR2Q9BXF3 1484 aa19.86■□□□□ 0.77
SLC39A3-204ENST00000589166 EIF4G1Q04637 1599 aaKnown RBP19.85■□□□□ 0.77
SLC39A3-204ENST00000589166 DNAJC5Q9H3Z4 198 aa19.22■□□□□ 0.67
SLC39A3-204ENST00000589166 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
SLC39A3-204ENST00000589166 ATAD2BQ9ULI0 1458 aa19.1■□□□□ 0.65
SLC39A3-204ENST00000589166 CUX2O14529 1486 aa19.09■□□□□ 0.65
SLC39A3-204ENST00000589166 SMARCA2P51531 1590 aa19.06■□□□□ 0.64
SLC39A3-204ENST00000589166 SMARCA4P51532 1647 aa19.05■□□□□ 0.64
SLC39A3-204ENST00000589166 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
SLC39A3-204ENST00000589166 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
SLC39A3-204ENST00000589166 BAZ1AQ9NRL2 1556 aaPredicted RBP18.95■□□□□ 0.62
SLC39A3-204ENST00000589166 PEG3Q9GZU2 1588 aa18.91■□□□□ 0.62
SLC39A3-204ENST00000589166 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
SLC39A3-204ENST00000589166 NESP48681 1621 aa18.89■□□□□ 0.61
SLC39A3-204ENST00000589166 MROH2BQ7Z745 1585 aa18.81■□□□□ 0.6
SLC39A3-204ENST00000589166 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
SLC39A3-204ENST00000589166 THOC2Q8NI27 1593 aaKnown RBP18.75■□□□□ 0.59
SLC39A3-204ENST00000589166 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
SLC39A3-204ENST00000589166 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
SLC39A3-204ENST00000589166 PDS5BQ9NTI5 1447 aa18.67■□□□□ 0.58
SLC39A3-204ENST00000589166 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
SLC39A3-204ENST00000589166 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
SLC39A3-204ENST00000589166 WIZO95785 1651 aa18.57■□□□□ 0.56
SLC39A3-204ENST00000589166 MRC2Q9UBG0 1479 aa18.49■□□□□ 0.55
SLC39A3-204ENST00000589166 WDR62O43379 1518 aa18.47■□□□□ 0.55
SLC39A3-204ENST00000589166 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.54
SLC39A3-204ENST00000589166 CFTRP13569 1480 aa18.37■□□□□ 0.53
SLC39A3-204ENST00000589166 FANCD2Q9BXW9 1451 aa18.37■□□□□ 0.53
SLC39A3-204ENST00000589166 TOP2AP11388 1531 aaKnown RBP18.36■□□□□ 0.53
SLC39A3-204ENST00000589166 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
SLC39A3-204ENST00000589166 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
SLC39A3-204ENST00000589166 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
SLC39A3-204ENST00000589166 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
SLC39A3-204ENST00000589166 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
SLC39A3-204ENST00000589166 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
SLC39A3-204ENST00000589166 TOPBP1Q92547 1522 aa18.02■□□□□ 0.47
SLC39A3-204ENST00000589166 ABCC8Q09428 1581 aa18.01■□□□□ 0.47
SLC39A3-204ENST00000589166 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
SLC39A3-204ENST00000589166 RIMBP3CA6NJZ7 1639 aa17.95■□□□□ 0.46
SLC39A3-204ENST00000589166 RIMBP3BA6NNM3 1639 aa17.95■□□□□ 0.46
SLC39A3-204ENST00000589166 RIMBP3Q9UFD9 1639 aa17.95■□□□□ 0.46
SLC39A3-204ENST00000589166 DNMBPQ6XZF7 1577 aa17.94■□□□□ 0.46
SLC39A3-204ENST00000589166 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
SLC39A3-204ENST00000589166 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
SLC39A3-204ENST00000589166 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
SLC39A3-204ENST00000589166 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.455e-8■■□□□ 11.9
SLC39A3-204ENST00000589166 CHD1O14646 1710 aa17.82■□□□□ 0.44
SLC39A3-204ENST00000589166 POLA1P09884 1462 aaPredicted RBP17.82■□□□□ 0.44
SLC39A3-204ENST00000589166 SOGA1O94964 1423 aa17.74■□□□□ 0.43
SLC39A3-204ENST00000589166 CYB5RLQ6IPT4 315 aa17.74■□□□□ 0.43
SLC39A3-204ENST00000589166 RAD54L2Q9Y4B4 1467 aa17.73■□□□□ 0.43
SLC39A3-204ENST00000589166 WDR97A6NE52 1622 aa17.72■□□□□ 0.43
SLC39A3-204ENST00000589166 FBLN2P98095 1184 aa17.72■□□□□ 0.43
SLC39A3-204ENST00000589166 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
SLC39A3-204ENST00000589166 ARAP1Q96P48 1450 aa17.68■□□□□ 0.42
SLC39A3-204ENST00000589166 FGD5Q6ZNL6 1462 aa17.67■□□□□ 0.42
SLC39A3-204ENST00000589166 CUX1P39880 1505 aa17.65■□□□□ 0.42
SLC39A3-204ENST00000589166 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.42
SLC39A3-204ENST00000589166 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
SLC39A3-204ENST00000589166 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
SLC39A3-204ENST00000589166 CLASP1Q7Z460 1538 aa17.61■□□□□ 0.41
SLC39A3-204ENST00000589166 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
SLC39A3-204ENST00000589166 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
SLC39A3-204ENST00000589166 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
SLC39A3-204ENST00000589166 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
SLC39A3-204ENST00000589166 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
SLC39A3-204ENST00000589166 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
SLC39A3-204ENST00000589166 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
SLC39A3-204ENST00000589166 GAPVD1Q14C86 1478 aa17.52■□□□□ 0.4
SLC39A3-204ENST00000589166 ABCA10Q8WWZ4 1543 aa17.5■□□□□ 0.39
SLC39A3-204ENST00000589166 ABCA5Q8WWZ7 1642 aa17.48■□□□□ 0.39
SLC39A3-204ENST00000589166 TOP2BQ02880 1626 aa17.46■□□□□ 0.39
SLC39A3-204ENST00000589166 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.38
SLC39A3-204ENST00000589166 GRIN2AQ12879 1464 aa17.37■□□□□ 0.37
SLC39A3-204ENST00000589166 ADAMTS12P58397 1594 aa17.33■□□□□ 0.37
SLC39A3-204ENST00000589166 NUP160Q12769 1436 aa17.33■□□□□ 0.36
SLC39A3-204ENST00000589166 FAM9AQ8IZU1 332 aaPredicted RBP17.33■□□□□ 0.36
SLC39A3-204ENST00000589166 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
SLC39A3-204ENST00000589166 ERCC6L2Q5T890 1561 aa17.3■□□□□ 0.36
SLC39A3-204ENST00000589166 FHAD1B1AJZ9 1412 aa17.3■□□□□ 0.36
SLC39A3-204ENST00000589166 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
SLC39A3-204ENST00000589166 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
SLC39A3-204ENST00000589166 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
SLC39A3-204ENST00000589166 KIF27Q86VH2 1401 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms