RNA–Protein interactions for RNA: ENST00000589048.1

PALM3-203, Transcript of paralemmin 3, humanhuman

APPRIS ALT2 TSL 3

Gene PALM3, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-203ENST00000589048 NISCHQ9Y2I1 1504 aa49.49■■■■■ 5.51
PALM3-203ENST00000589048 CCDC180Q9P1Z9 1646 aa43.95■■■■■ 4.63
PALM3-203ENST00000589048 ABCC9O60706 1549 aa42.97■■■■■ 4.47
PALM3-203ENST00000589048 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
PALM3-203ENST00000589048 NACADO15069 1562 aa41.29■■■■■ 4.2
PALM3-203ENST00000589048 ZCCHC6Q5VYS8 1495 aaKnown RBP41.27■■■■■ 4.2
PALM3-203ENST00000589048 DCAF8L2P0C7V8 631 aa41.19■■■■■ 4.18
PALM3-203ENST00000589048 MYO15BQ96JP2 1530 aa41.08■■■■■ 4.17
PALM3-203ENST00000589048 DCAF1Q9Y4B6 1507 aa40.95■■■■■ 4.15
PALM3-203ENST00000589048 UNC13AQ9UPW8 1703 aa40.42■■■■■ 4.06
PALM3-203ENST00000589048 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
PALM3-203ENST00000589048 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
PALM3-203ENST00000589048 SCRIBQ14160 1630 aa40.13■■■■■ 4.01
PALM3-203ENST00000589048 SHROOM4Q9ULL8 1493 aa39.67■■■■□ 3.94
PALM3-203ENST00000589048 DNAJC5BQ9UF47 199 aa39.43■■■■□ 3.9
PALM3-203ENST00000589048 EIF4G1Q04637 1599 aaKnown RBP39.05■■■■□ 3.84
PALM3-203ENST00000589048 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
PALM3-203ENST00000589048 CECR2Q9BXF3 1484 aa38.59■■■■□ 3.77
PALM3-203ENST00000589048 SMARCA4P51532 1647 aa38.39■■■■□ 3.74
PALM3-203ENST00000589048 BAZ1AQ9NRL2 1556 aaPredicted RBP38.32■■■■□ 3.73
PALM3-203ENST00000589048 ATAD2BQ9ULI0 1458 aa38.18■■■■□ 3.7
PALM3-203ENST00000589048 MROH2BQ7Z745 1585 aa38.17■■■■□ 3.7
PALM3-203ENST00000589048 NCAPD3P42695 1498 aa38.13■■■■□ 3.69
PALM3-203ENST00000589048 SMARCA2P51531 1590 aa38.09■■■■□ 3.69
PALM3-203ENST00000589048 PEG3Q9GZU2 1588 aa38.02■■■■□ 3.68
PALM3-203ENST00000589048 HMGXB3Q12766 1538 aa37.96■■■■□ 3.67
PALM3-203ENST00000589048 BAZ1BQ9UIG0 1483 aaKnown RBP37.83■■■■□ 3.65
PALM3-203ENST00000589048 RSF1Q96T23 1441 aaPredicted RBP37.74■■■■□ 3.63
PALM3-203ENST00000589048 WIZO95785 1651 aa37.73■■■■□ 3.63
PALM3-203ENST00000589048 TOP2AP11388 1531 aaKnown RBP37.34■■■■□ 3.57
PALM3-203ENST00000589048 NESP48681 1621 aa37.23■■■■□ 3.55
PALM3-203ENST00000589048 LAMC3Q9Y6N6 1575 aa37.08■■■■□ 3.53
PALM3-203ENST00000589048 CADPSQ9ULU8 1353 aa37.01■■■■□ 3.51
PALM3-203ENST00000589048 ERCC6Q03468 1493 aa36.97■■■■□ 3.51
PALM3-203ENST00000589048 CCDC88BA6NC98 1476 aa36.89■■■■□ 3.5
PALM3-203ENST00000589048 CFTRP13569 1480 aa36.82■■■■□ 3.49
PALM3-203ENST00000589048 PDS5BQ9NTI5 1447 aa36.81■■■■□ 3.48
PALM3-203ENST00000589048 KIF21AQ7Z4S6 1674 aa36.76■■■■□ 3.47
PALM3-203ENST00000589048 SUPT5HO00267 1087 aaKnown RBP36.73■■■■□ 3.47
PALM3-203ENST00000589048 THOC2Q8NI27 1593 aaKnown RBP36.66■■■■□ 3.46
PALM3-203ENST00000589048 CUX2O14529 1486 aa36.6■■■■□ 3.45
PALM3-203ENST00000589048 FANCD2Q9BXW9 1451 aa36.59■■■■□ 3.45
PALM3-203ENST00000589048 CEP164Q9UPV0 1460 aa36.53■■■■□ 3.44
PALM3-203ENST00000589048 PRDM2Q13029 1718 aa36.51■■■■□ 3.43
PALM3-203ENST00000589048 MRC2Q9UBG0 1479 aa36.48■■■■□ 3.43
PALM3-203ENST00000589048 WDR62O43379 1518 aa36.38■■■■□ 3.41
PALM3-203ENST00000589048 URB2Q14146 1524 aaKnown RBP36.26■■■■□ 3.4
PALM3-203ENST00000589048 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
PALM3-203ENST00000589048 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
PALM3-203ENST00000589048 ABCC8Q09428 1581 aa35.95■■■■□ 3.35
PALM3-203ENST00000589048 CUX1P39880 1505 aa35.81■■■■□ 3.32
PALM3-203ENST00000589048 IFT140Q96RY7 1462 aa35.75■■■■□ 3.31
PALM3-203ENST00000589048 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
PALM3-203ENST00000589048 DNAJC5Q9H3Z4 198 aa35.71■■■■□ 3.31
PALM3-203ENST00000589048 FGD5Q6ZNL6 1462 aa35.65■■■■□ 3.3
PALM3-203ENST00000589048 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
PALM3-203ENST00000589048 ZNF608Q9ULD9 1512 aaPredicted RBP35.64■■■■□ 3.3
PALM3-203ENST00000589048 RAD54L2Q9Y4B4 1467 aa35.58■■■■□ 3.29
PALM3-203ENST00000589048 SOGA1O94964 1423 aa35.54■■■■□ 3.28
PALM3-203ENST00000589048 WRNQ14191 1432 aaPredicted RBP eCLIP35.54■■■■□ 3.28
PALM3-203ENST00000589048 SYNJ1O43426 1573 aa35.51■■■■□ 3.27
PALM3-203ENST00000589048 EIF4G3O43432 1585 aaKnown RBP35.49■■■■□ 3.27
PALM3-203ENST00000589048 BIVM-ERCC5R4GMW8 1640 aa35.48■■■■□ 3.27
PALM3-203ENST00000589048 TOP2BQ02880 1626 aa35.47■■■■□ 3.27
PALM3-203ENST00000589048 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.26
PALM3-203ENST00000589048 WDR97A6NE52 1622 aa35.38■■■■□ 3.25
PALM3-203ENST00000589048 TDRD9Q8NDG6 1382 aaKnown RBP35.36■■■■□ 3.25
PALM3-203ENST00000589048 ABCA10Q8WWZ4 1543 aa35.3■■■■□ 3.24
PALM3-203ENST00000589048 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
PALM3-203ENST00000589048 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
PALM3-203ENST00000589048 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
PALM3-203ENST00000589048 SNAPC4Q5SXM2 1469 aa35.1■■■■□ 3.21
PALM3-203ENST00000589048 PBRM1Q86U86 1689 aa35.07■■■■□ 3.2
PALM3-203ENST00000589048 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
PALM3-203ENST00000589048 MAGI1Q96QZ7 1491 aaPredicted RBP35.03■■■■□ 3.2
PALM3-203ENST00000589048 CHD1O14646 1710 aa35.01■■■■□ 3.19
PALM3-203ENST00000589048 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
PALM3-203ENST00000589048 FBLN2P98095 1184 aa34.89■■■■□ 3.18
PALM3-203ENST00000589048 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
PALM3-203ENST00000589048 ADAMTS12P58397 1594 aa34.84■■■■□ 3.17
PALM3-203ENST00000589048 CHMP7Q8WUX9 453 aaPredicted RBP34.81■■■■□ 3.16
PALM3-203ENST00000589048 KIF27Q86VH2 1401 aa34.77■■■■□ 3.16
PALM3-203ENST00000589048 FHAD1B1AJZ9 1412 aa34.73■■■■□ 3.15
PALM3-203ENST00000589048 GRIN2AQ12879 1464 aa34.7■■■■□ 3.15
PALM3-203ENST00000589048 CLASP1Q7Z460 1538 aa34.68■■■■□ 3.14
PALM3-203ENST00000589048 IGF1RP08069 1367 aa34.66■■■■□ 3.14
PALM3-203ENST00000589048 TRIM41Q8WV44 630 aa34.66■■■■□ 3.14
PALM3-203ENST00000589048 NUP160Q12769 1436 aa34.57■■■■□ 3.13
PALM3-203ENST00000589048 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
PALM3-203ENST00000589048 RUSC2Q8N2Y8 1516 aa34.55■■■■□ 3.12
PALM3-203ENST00000589048 CEP170Q5SW79 1584 aa34.55■■■■□ 3.12
PALM3-203ENST00000589048 RIMBP3CA6NJZ7 1639 aa34.54■■■■□ 3.12
PALM3-203ENST00000589048 RIMBP3BA6NNM3 1639 aa34.54■■■■□ 3.12
PALM3-203ENST00000589048 RIMBP3Q9UFD9 1639 aa34.54■■■■□ 3.12
PALM3-203ENST00000589048 CUL7Q14999 1698 aa34.54■■■■□ 3.12
PALM3-203ENST00000589048 CARMIL1Q5VZK9 1371 aa34.43■■■■□ 3.1
PALM3-203ENST00000589048 CHIC1Q5VXU3 224 aa34.36■■■■□ 3.09
PALM3-203ENST00000589048 ARAP1Q96P48 1450 aa34.31■■■■□ 3.08
PALM3-203ENST00000589048 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
PALM3-203ENST00000589048 RAPGEF2Q9Y4G8 1499 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms