RNA–Protein interactions for RNA: ENST00000588941.1

RDH13-211, Transcript of retinol dehydrogenase 13, humanhuman

TSL 3

Gene RDH13, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-211ENST00000588941 NISCHQ9Y2I1 1504 aa18.64■□□□□ 0.57
RDH13-211ENST00000588941 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
RDH13-211ENST00000588941 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
RDH13-211ENST00000588941 CCDC180Q9P1Z9 1646 aa16.59■□□□□ 0.25
RDH13-211ENST00000588941 ABCC9O60706 1549 aa16.57■□□□□ 0.24
RDH13-211ENST00000588941 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
RDH13-211ENST00000588941 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
RDH13-211ENST00000588941 NACADO15069 1562 aa15.7■□□□□ 0.1
RDH13-211ENST00000588941 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
RDH13-211ENST00000588941 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
RDH13-211ENST00000588941 DNAJC5BQ9UF47 199 aa15.45■□□□□ 0.06
RDH13-211ENST00000588941 ZCCHC6Q5VYS8 1495 aaKnown RBP15.43■□□□□ 0.06
RDH13-211ENST00000588941 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
RDH13-211ENST00000588941 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
RDH13-211ENST00000588941 BICRAQ9NZM4 1560 aa15.29■□□□□ 0.04
RDH13-211ENST00000588941 SCRIBQ14160 1630 aa15.2■□□□□ 0.02
RDH13-211ENST00000588941 SENP3Q9H4L4 574 aaPredicted RBP15.14■□□□□ 0.01
RDH13-211ENST00000588941 SHROOM4Q9ULL8 1493 aa15.06■□□□□ 0
RDH13-211ENST00000588941 PHF23Q9BUL5 403 aaPredicted RBP15.02■□□□□ -0
RDH13-211ENST00000588941 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
RDH13-211ENST00000588941 EIF4G1Q04637 1599 aaKnown RBP14.93□□□□□ -0.02
RDH13-211ENST00000588941 CECR2Q9BXF3 1484 aa14.89□□□□□ -0.03
RDH13-211ENST00000588941 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
RDH13-211ENST00000588941 ATAD2BQ9ULI0 1458 aa14.5□□□□□ -0.09
RDH13-211ENST00000588941 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
RDH13-211ENST00000588941 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
RDH13-211ENST00000588941 SMARCA2P51531 1590 aa14.44□□□□□ -0.1
RDH13-211ENST00000588941 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
RDH13-211ENST00000588941 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
RDH13-211ENST00000588941 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
RDH13-211ENST00000588941 PEG3Q9GZU2 1588 aa14.31□□□□□ -0.12
RDH13-211ENST00000588941 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
RDH13-211ENST00000588941 FOXD1Q16676 465 aa14.28□□□□□ -0.12
RDH13-211ENST00000588941 NESP48681 1621 aa14.26□□□□□ -0.13
RDH13-211ENST00000588941 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
RDH13-211ENST00000588941 WIZO95785 1651 aa14.21□□□□□ -0.13
RDH13-211ENST00000588941 CUX2O14529 1486 aa14.17□□□□□ -0.14
RDH13-211ENST00000588941 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
RDH13-211ENST00000588941 RSF1Q96T23 1441 aaPredicted RBP14.14□□□□□ -0.15
RDH13-211ENST00000588941 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
RDH13-211ENST00000588941 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
RDH13-211ENST00000588941 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
RDH13-211ENST00000588941 THOC2Q8NI27 1593 aaKnown RBP14.01□□□□□ -0.17
RDH13-211ENST00000588941 TOP2AP11388 1531 aaKnown RBP14□□□□□ -0.17
RDH13-211ENST00000588941 CFTRP13569 1480 aa13.94□□□□□ -0.18
RDH13-211ENST00000588941 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
RDH13-211ENST00000588941 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
RDH13-211ENST00000588941 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
RDH13-211ENST00000588941 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
RDH13-211ENST00000588941 WDR62O43379 1518 aa13.87□□□□□ -0.19
RDH13-211ENST00000588941 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
RDH13-211ENST00000588941 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
RDH13-211ENST00000588941 SUPT5HO00267 1087 aaKnown RBP13.76□□□□□ -0.21
RDH13-211ENST00000588941 ABCC8Q09428 1581 aa13.67□□□□□ -0.22
RDH13-211ENST00000588941 OSCARQ8IYS5 282 aa13.67□□□□□ -0.22
RDH13-211ENST00000588941 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
RDH13-211ENST00000588941 IFT140Q96RY7 1462 aa13.64□□□□□ -0.23
RDH13-211ENST00000588941 ZNF608Q9ULD9 1512 aaPredicted RBP13.62□□□□□ -0.23
RDH13-211ENST00000588941 DNMBPQ6XZF7 1577 aa13.62□□□□□ -0.23
RDH13-211ENST00000588941 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
RDH13-211ENST00000588941 SOGA1O94964 1423 aa13.55□□□□□ -0.24
RDH13-211ENST00000588941 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.24
RDH13-211ENST00000588941 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
RDH13-211ENST00000588941 FBLN2P98095 1184 aa13.53□□□□□ -0.24
RDH13-211ENST00000588941 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
RDH13-211ENST00000588941 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
RDH13-211ENST00000588941 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
RDH13-211ENST00000588941 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
RDH13-211ENST00000588941 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
RDH13-211ENST00000588941 CUX1P39880 1505 aa13.48□□□□□ -0.25
RDH13-211ENST00000588941 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
RDH13-211ENST00000588941 CHD1O14646 1710 aa13.39□□□□□ -0.27
RDH13-211ENST00000588941 SNAPC4Q5SXM2 1469 aa13.37□□□□□ -0.27
RDH13-211ENST00000588941 GRIN2BQ13224 1484 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 CYB5RLQ6IPT4 315 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
RDH13-211ENST00000588941 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
RDH13-211ENST00000588941 WRNQ14191 1432 aaPredicted RBP eCLIP13.34□□□□□ -0.27
RDH13-211ENST00000588941 ARHGEF11O15085 1522 aa13.34□□□□□ -0.27
RDH13-211ENST00000588941 POTEDQ86YR6 584 aa13.33□□□□□ -0.28
RDH13-211ENST00000588941 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
RDH13-211ENST00000588941 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
RDH13-211ENST00000588941 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
RDH13-211ENST00000588941 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
RDH13-211ENST00000588941 TOP2BQ02880 1626 aa13.29□□□□□ -0.28
RDH13-211ENST00000588941 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
RDH13-211ENST00000588941 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
RDH13-211ENST00000588941 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
RDH13-211ENST00000588941 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
RDH13-211ENST00000588941 PIAS4Q8N2W9 510 aaPredicted RBP13.26□□□□□ -0.29
RDH13-211ENST00000588941 ABCA5Q8WWZ7 1642 aa13.26□□□□□ -0.29
RDH13-211ENST00000588941 ADRA2BP18089 450 aa13.25□□□□□ -0.29
RDH13-211ENST00000588941 MSH5O43196 834 aa13.23□□□□□ -0.29
RDH13-211ENST00000588941 CLASP1Q7Z460 1538 aa13.21□□□□□ -0.29
RDH13-211ENST00000588941 ARAP1Q96P48 1450 aa13.21□□□□□ -0.3
RDH13-211ENST00000588941 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
RDH13-211ENST00000588941 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms