RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 NISCHQ9Y2I1 1504 aa28.22■■■□□ 2.11
RFX1-204ENST00000588885 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
RFX1-204ENST00000588885 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.61
RFX1-204ENST00000588885 CHIC1Q5VXU3 224 aa25.09■■□□□ 1.61
RFX1-204ENST00000588885 ABCC9O60706 1549 aa25.05■■□□□ 1.6
RFX1-204ENST00000588885 DCAF8L2P0C7V8 631 aa23.99■■□□□ 1.43
RFX1-204ENST00000588885 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
RFX1-204ENST00000588885 NACADO15069 1562 aa23.69■■□□□ 1.38
RFX1-204ENST00000588885 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
RFX1-204ENST00000588885 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
RFX1-204ENST00000588885 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
RFX1-204ENST00000588885 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
RFX1-204ENST00000588885 DNAJC5BQ9UF47 199 aa23.29■■□□□ 1.32
RFX1-204ENST00000588885 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
RFX1-204ENST00000588885 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
RFX1-204ENST00000588885 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
RFX1-204ENST00000588885 SCRIBQ14160 1630 aa23■■□□□ 1.27
RFX1-204ENST00000588885 SHROOM4Q9ULL8 1493 aa22.8■■□□□ 1.24
RFX1-204ENST00000588885 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
RFX1-204ENST00000588885 CC2D2AQ9P2K1 1620 aa22.64■■□□□ 1.22
RFX1-204ENST00000588885 EIF4G1Q04637 1599 aaKnown RBP22.58■■□□□ 1.2
RFX1-204ENST00000588885 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
RFX1-204ENST00000588885 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
RFX1-204ENST00000588885 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
RFX1-204ENST00000588885 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
RFX1-204ENST00000588885 BAZ1AQ9NRL2 1556 aaPredicted RBP21.85■■□□□ 1.09
RFX1-204ENST00000588885 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
RFX1-204ENST00000588885 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
RFX1-204ENST00000588885 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
RFX1-204ENST00000588885 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
RFX1-204ENST00000588885 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
RFX1-204ENST00000588885 POTEDQ86YR6 584 aa21.7■■□□□ 1.06
RFX1-204ENST00000588885 PEG3Q9GZU2 1588 aa21.63■■□□□ 1.05
RFX1-204ENST00000588885 FOXD1Q16676 465 aa21.63■■□□□ 1.05
RFX1-204ENST00000588885 NESP48681 1621 aa21.55■■□□□ 1.04
RFX1-204ENST00000588885 CUX2O14529 1486 aa21.54■■□□□ 1.04
RFX1-204ENST00000588885 WIZO95785 1651 aa21.5■■□□□ 1.03
RFX1-204ENST00000588885 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
RFX1-204ENST00000588885 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
RFX1-204ENST00000588885 DNAJC5Q9H3Z4 198 aa21.39■■□□□ 1.01
RFX1-204ENST00000588885 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
RFX1-204ENST00000588885 CADPSQ9ULU8 1353 aa21.33■■□□□ 1
RFX1-204ENST00000588885 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
RFX1-204ENST00000588885 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
RFX1-204ENST00000588885 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
RFX1-204ENST00000588885 CFTRP13569 1480 aa21.09■□□□□ 0.97
RFX1-204ENST00000588885 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
RFX1-204ENST00000588885 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
RFX1-204ENST00000588885 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
RFX1-204ENST00000588885 CEP164Q9UPV0 1460 aa21.04■□□□□ 0.96
RFX1-204ENST00000588885 WDR62O43379 1518 aa20.99■□□□□ 0.95
RFX1-204ENST00000588885 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
RFX1-204ENST00000588885 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
RFX1-204ENST00000588885 URB2Q14146 1524 aaKnown RBP20.87■□□□□ 0.93
RFX1-204ENST00000588885 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
RFX1-204ENST00000588885 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
RFX1-204ENST00000588885 IFT140Q96RY7 1462 aa20.61■□□□□ 0.89
RFX1-204ENST00000588885 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
RFX1-204ENST00000588885 ZNF608Q9ULD9 1512 aaPredicted RBP20.6■□□□□ 0.89
RFX1-204ENST00000588885 DNMBPQ6XZF7 1577 aa20.58■□□□□ 0.88
RFX1-204ENST00000588885 MSH5O43196 834 aa20.57■□□□□ 0.88
RFX1-204ENST00000588885 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
RFX1-204ENST00000588885 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
RFX1-204ENST00000588885 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
RFX1-204ENST00000588885 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
RFX1-204ENST00000588885 RAD54L2Q9Y4B4 1467 aa20.49■□□□□ 0.87
RFX1-204ENST00000588885 SOGA1O94964 1423 aa20.47■□□□□ 0.87
RFX1-204ENST00000588885 TDRD9Q8NDG6 1382 aaKnown RBP20.44■□□□□ 0.86
RFX1-204ENST00000588885 CUX1P39880 1505 aa20.43■□□□□ 0.86
RFX1-204ENST00000588885 FGD5Q6ZNL6 1462 aa20.42■□□□□ 0.86
RFX1-204ENST00000588885 FBLN2P98095 1184 aa20.41■□□□□ 0.86
RFX1-204ENST00000588885 TARBP1Q13395 1621 aaKnown RBP20.41■□□□□ 0.86
RFX1-204ENST00000588885 CHD1O14646 1710 aa20.41■□□□□ 0.86
RFX1-204ENST00000588885 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
RFX1-204ENST00000588885 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
RFX1-204ENST00000588885 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
RFX1-204ENST00000588885 ARHGEF11O15085 1522 aa20.25■□□□□ 0.83
RFX1-204ENST00000588885 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
RFX1-204ENST00000588885 WRNQ14191 1432 aaPredicted RBP eCLIP20.24■□□□□ 0.83
RFX1-204ENST00000588885 SNAPC4Q5SXM2 1469 aa20.23■□□□□ 0.83
RFX1-204ENST00000588885 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
RFX1-204ENST00000588885 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
RFX1-204ENST00000588885 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
RFX1-204ENST00000588885 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
RFX1-204ENST00000588885 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
RFX1-204ENST00000588885 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
RFX1-204ENST00000588885 TOP2BQ02880 1626 aa20.13■□□□□ 0.81
RFX1-204ENST00000588885 MAGI1Q96QZ7 1491 aaPredicted RBP20.12■□□□□ 0.81
RFX1-204ENST00000588885 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
RFX1-204ENST00000588885 SYNJ2O15056 1496 aa20.08■□□□□ 0.81
RFX1-204ENST00000588885 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
RFX1-204ENST00000588885 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
RFX1-204ENST00000588885 ARAP1Q96P48 1450 aa20.03■□□□□ 0.8
RFX1-204ENST00000588885 CLASP1Q7Z460 1538 aa20.01■□□□□ 0.79
RFX1-204ENST00000588885 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
RFX1-204ENST00000588885 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
RFX1-204ENST00000588885 FHAD1B1AJZ9 1412 aa19.93■□□□□ 0.78
RFX1-204ENST00000588885 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
RFX1-204ENST00000588885 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
RFX1-204ENST00000588885 ERICH3Q5RHP9 1530 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms