RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 NISCHQ9Y2I1 1504 aa45.59■■■■■ 4.89
ERCC1-207ENST00000588738 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
ERCC1-207ENST00000588738 ABCC9O60706 1549 aa39.67■■■■□ 3.94
ERCC1-207ENST00000588738 RB1CC1Q8TDY2 1594 aa38.19■■■■□ 3.7
ERCC1-207ENST00000588738 DCAF8L2P0C7V8 631 aa38.16■■■■□ 3.7
ERCC1-207ENST00000588738 NACADO15069 1562 aa38.14■■■■□ 3.7
ERCC1-207ENST00000588738 ZCCHC6Q5VYS8 1495 aaKnown RBP37.96■■■■□ 3.67
ERCC1-207ENST00000588738 MYO15BQ96JP2 1530 aa37.89■■■■□ 3.66
ERCC1-207ENST00000588738 DCAF1Q9Y4B6 1507 aa37.72■■■■□ 3.63
ERCC1-207ENST00000588738 UNC13AQ9UPW8 1703 aa37.33■■■■□ 3.57
ERCC1-207ENST00000588738 PABPN1Q86U42 306 aaKnown RBP eCLIP37.07■■■■□ 3.52
ERCC1-207ENST00000588738 BICRAQ9NZM4 1560 aa36.99■■■■□ 3.51
ERCC1-207ENST00000588738 SCRIBQ14160 1630 aa36.99■■■■□ 3.51
ERCC1-207ENST00000588738 SHROOM4Q9ULL8 1493 aa36.62■■■■□ 3.45
ERCC1-207ENST00000588738 DNAJC5BQ9UF47 199 aa36.4■■■■□ 3.42
ERCC1-207ENST00000588738 EIF4G1Q04637 1599 aaKnown RBP36.03■■■■□ 3.36
ERCC1-207ENST00000588738 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
ERCC1-207ENST00000588738 CECR2Q9BXF3 1484 aa35.65■■■■□ 3.3
ERCC1-207ENST00000588738 SMARCA4P51532 1647 aa35.39■■■■□ 3.26
ERCC1-207ENST00000588738 BAZ1AQ9NRL2 1556 aaPredicted RBP35.35■■■■□ 3.25
ERCC1-207ENST00000588738 ATAD2BQ9ULI0 1458 aa35.18■■■■□ 3.22
ERCC1-207ENST00000588738 NCAPD3P42695 1498 aa35.17■■■■□ 3.22
ERCC1-207ENST00000588738 SMARCA2P51531 1590 aa35.17■■■■□ 3.22
ERCC1-207ENST00000588738 MROH2BQ7Z745 1585 aa35.13■■■■□ 3.21
ERCC1-207ENST00000588738 PEG3Q9GZU2 1588 aa35.03■■■■□ 3.2
ERCC1-207ENST00000588738 HMGXB3Q12766 1538 aa35■■■■□ 3.19
ERCC1-207ENST00000588738 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
ERCC1-207ENST00000588738 WIZO95785 1651 aa34.77■■■■□ 3.16
ERCC1-207ENST00000588738 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
ERCC1-207ENST00000588738 TOP2AP11388 1531 aaKnown RBP34.39■■■■□ 3.1
ERCC1-207ENST00000588738 NESP48681 1621 aa34.31■■■■□ 3.08
ERCC1-207ENST00000588738 LAMC3Q9Y6N6 1575 aa34.27■■■■□ 3.08
ERCC1-207ENST00000588738 ERCC6Q03468 1493 aa34.22■■■■□ 3.07
ERCC1-207ENST00000588738 CADPSQ9ULU8 1353 aa34.15■■■■□ 3.06
ERCC1-207ENST00000588738 PDS5BQ9NTI5 1447 aa34.04■■■■□ 3.04
ERCC1-207ENST00000588738 CCDC88BA6NC98 1476 aa33.99■■■■□ 3.03
ERCC1-207ENST00000588738 KIF21AQ7Z4S6 1674 aa33.94■■■■□ 3.02
ERCC1-207ENST00000588738 CFTRP13569 1480 aa33.94■■■■□ 3.02
ERCC1-207ENST00000588738 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
ERCC1-207ENST00000588738 CUX2O14529 1486 aa33.84■■■■□ 3.01
ERCC1-207ENST00000588738 THOC2Q8NI27 1593 aaKnown RBP33.8■■■■□ 3
ERCC1-207ENST00000588738 FANCD2Q9BXW9 1451 aa33.76■■■□□ 2.99
ERCC1-207ENST00000588738 PRDM2Q13029 1718 aa33.73■■■□□ 2.99
ERCC1-207ENST00000588738 CEP164Q9UPV0 1460 aa33.73■■■□□ 2.99
ERCC1-207ENST00000588738 MRC2Q9UBG0 1479 aa33.66■■■□□ 2.98
ERCC1-207ENST00000588738 WDR62O43379 1518 aa33.54■■■□□ 2.96
ERCC1-207ENST00000588738 URB2Q14146 1524 aaKnown RBP33.41■■■□□ 2.94
ERCC1-207ENST00000588738 ABCC8Q09428 1581 aa33.26■■■□□ 2.91
ERCC1-207ENST00000588738 TOPBP1Q92547 1522 aa33.22■■■□□ 2.91
ERCC1-207ENST00000588738 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
ERCC1-207ENST00000588738 IFT140Q96RY7 1462 aa33.01■■■□□ 2.88
ERCC1-207ENST00000588738 CUX1P39880 1505 aa32.95■■■□□ 2.87
ERCC1-207ENST00000588738 POLA1P09884 1462 aaPredicted RBP32.93■■■□□ 2.86
ERCC1-207ENST00000588738 TARBP1Q13395 1621 aaKnown RBP32.86■■■□□ 2.85
ERCC1-207ENST00000588738 FGD5Q6ZNL6 1462 aa32.85■■■□□ 2.85
ERCC1-207ENST00000588738 ZNF608Q9ULD9 1512 aaPredicted RBP32.84■■■□□ 2.85
ERCC1-207ENST00000588738 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
ERCC1-207ENST00000588738 SOGA1O94964 1423 aa32.82■■■□□ 2.84
ERCC1-207ENST00000588738 RAD54L2Q9Y4B4 1467 aa32.78■■■□□ 2.84
ERCC1-207ENST00000588738 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
ERCC1-207ENST00000588738 EIF4G3O43432 1585 aaKnown RBP32.73■■■□□ 2.83
ERCC1-207ENST00000588738 TOP2BQ02880 1626 aa32.69■■■□□ 2.82
ERCC1-207ENST00000588738 BIVM-ERCC5R4GMW8 1640 aa32.69■■■□□ 2.82
ERCC1-207ENST00000588738 AQRO60306 1485 aaKnown RBP eCLIP32.67■■■□□ 2.82
ERCC1-207ENST00000588738 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
ERCC1-207ENST00000588738 TDRD9Q8NDG6 1382 aaKnown RBP32.62■■■□□ 2.81
ERCC1-207ENST00000588738 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
ERCC1-207ENST00000588738 ABCA10Q8WWZ4 1543 aa32.53■■■□□ 2.8
ERCC1-207ENST00000588738 OSCARQ8IYS5 282 aa32.48■■■□□ 2.79
ERCC1-207ENST00000588738 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
ERCC1-207ENST00000588738 GRIN2BQ13224 1484 aa32.43■■■□□ 2.78
ERCC1-207ENST00000588738 ABCA5Q8WWZ7 1642 aa32.4■■■□□ 2.78
ERCC1-207ENST00000588738 PBRM1Q86U86 1689 aa32.38■■■□□ 2.77
ERCC1-207ENST00000588738 SNAPC4Q5SXM2 1469 aa32.36■■■□□ 2.77
ERCC1-207ENST00000588738 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
ERCC1-207ENST00000588738 CHD1O14646 1710 aa32.34■■■□□ 2.77
ERCC1-207ENST00000588738 FBLN2P98095 1184 aa32.33■■■□□ 2.77
ERCC1-207ENST00000588738 CHMP7Q8WUX9 453 aaPredicted RBP32.24■■■□□ 2.75
ERCC1-207ENST00000588738 SYNJ2O15056 1496 aa32.22■■■□□ 2.75
ERCC1-207ENST00000588738 ERICH3Q5RHP9 1530 aa32.16■■■□□ 2.74
ERCC1-207ENST00000588738 KIF27Q86VH2 1401 aa32.09■■■□□ 2.73
ERCC1-207ENST00000588738 ADAMTS12P58397 1594 aa32.08■■■□□ 2.73
ERCC1-207ENST00000588738 FHAD1B1AJZ9 1412 aa32.06■■■□□ 2.72
ERCC1-207ENST00000588738 TRIM41Q8WV44 630 aa32.02■■■□□ 2.72
ERCC1-207ENST00000588738 GRIN2AQ12879 1464 aa32■■■□□ 2.71
ERCC1-207ENST00000588738 CLASP1Q7Z460 1538 aa31.95■■■□□ 2.71
ERCC1-207ENST00000588738 IGF1RP08069 1367 aa31.94■■■□□ 2.7
ERCC1-207ENST00000588738 RIMBP3CA6NJZ7 1639 aa31.93■■■□□ 2.7
ERCC1-207ENST00000588738 RIMBP3BA6NNM3 1639 aa31.93■■■□□ 2.7
ERCC1-207ENST00000588738 RIMBP3Q9UFD9 1639 aa31.93■■■□□ 2.7
ERCC1-207ENST00000588738 ARHGEF11O15085 1522 aa31.9■■■□□ 2.7
ERCC1-207ENST00000588738 CUL7Q14999 1698 aa31.88■■■□□ 2.69
ERCC1-207ENST00000588738 NUP160Q12769 1436 aa31.84■■■□□ 2.69
ERCC1-207ENST00000588738 CEP170Q5SW79 1584 aa31.83■■■□□ 2.69
ERCC1-207ENST00000588738 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
ERCC1-207ENST00000588738 RUSC2Q8N2Y8 1516 aa31.76■■■□□ 2.68
ERCC1-207ENST00000588738 CYB5RLQ6IPT4 315 aa31.65■■■□□ 2.66
ERCC1-207ENST00000588738 ARAP1Q96P48 1450 aa31.64■■■□□ 2.66
ERCC1-207ENST00000588738 SHROOM2Q13796 1616 aa31.62■■■□□ 2.65
ERCC1-207ENST00000588738 CHIC1Q5VXU3 224 aa31.59■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms