RNA–Protein interactions for RNA: ENST00000588736.1

SRP68-208, Transcript of signal recognition particle 68, humanhuman

TSL 2

Gene SRP68, Length 2,532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-208ENST00000588736 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
SRP68-208ENST00000588736 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
SRP68-208ENST00000588736 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
SRP68-208ENST00000588736 DCAF1Q9Y4B6 1507 aa18.07■□□□□ 0.48
SRP68-208ENST00000588736 MYO15BQ96JP2 1530 aa17.85■□□□□ 0.45
SRP68-208ENST00000588736 NACADO15069 1562 aa17.63■□□□□ 0.41
SRP68-208ENST00000588736 ABCC9O60706 1549 aa17.6■□□□□ 0.41
SRP68-208ENST00000588736 DCAF8L2P0C7V8 631 aa17.5■□□□□ 0.39
SRP68-208ENST00000588736 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
SRP68-208ENST00000588736 RB1CC1Q8TDY2 1594 aa17.43■□□□□ 0.38
SRP68-208ENST00000588736 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
SRP68-208ENST00000588736 UNC13AQ9UPW8 1703 aa17.13■□□□□ 0.33
SRP68-208ENST00000588736 BICRAQ9NZM4 1560 aa16.88■□□□□ 0.29
SRP68-208ENST00000588736 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
SRP68-208ENST00000588736 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
SRP68-208ENST00000588736 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
SRP68-208ENST00000588736 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
SRP68-208ENST00000588736 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.26
SRP68-208ENST00000588736 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
SRP68-208ENST00000588736 WIZO95785 1651 aa16.59■□□□□ 0.25
SRP68-208ENST00000588736 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
SRP68-208ENST00000588736 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
SRP68-208ENST00000588736 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
SRP68-208ENST00000588736 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
SRP68-208ENST00000588736 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
SRP68-208ENST00000588736 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
SRP68-208ENST00000588736 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
SRP68-208ENST00000588736 CHIC1Q5VXU3 224 aa16.27■□□□□ 0.2
SRP68-208ENST00000588736 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
SRP68-208ENST00000588736 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
SRP68-208ENST00000588736 NCAPD3P42695 1498 aa16.21■□□□□ 0.18
SRP68-208ENST00000588736 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
SRP68-208ENST00000588736 PRDM2Q13029 1718 aa15.99■□□□□ 0.15
SRP68-208ENST00000588736 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
SRP68-208ENST00000588736 ABCC8Q09428 1581 aa15.88■□□□□ 0.13
SRP68-208ENST00000588736 CFTRP13569 1480 aa15.86■□□□□ 0.13
SRP68-208ENST00000588736 HRCP23327 699 aa15.86■□□□□ 0.13
SRP68-208ENST00000588736 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
SRP68-208ENST00000588736 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
SRP68-208ENST00000588736 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SRP68-208ENST00000588736 SYNJ1O43426 1573 aa15.78■□□□□ 0.12
SRP68-208ENST00000588736 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
SRP68-208ENST00000588736 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
SRP68-208ENST00000588736 EEA1Q15075 1411 aa15.73■□□□□ 0.11
SRP68-208ENST00000588736 PPARGC1BQ86YN6 1023 aaKnown RBP15.72■□□□□ 0.11
SRP68-208ENST00000588736 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
SRP68-208ENST00000588736 CUX1P39880 1505 aa15.64■□□□□ 0.09
SRP68-208ENST00000588736 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
SRP68-208ENST00000588736 FANCD2Q9BXW9 1451 aa15.57■□□□□ 0.08
SRP68-208ENST00000588736 SOGA1O94964 1423 aa15.56■□□□□ 0.08
SRP68-208ENST00000588736 KIF21BO75037 1637 aa15.55■□□□□ 0.08
SRP68-208ENST00000588736 DNMBPQ6XZF7 1577 aa15.54■□□□□ 0.08
SRP68-208ENST00000588736 NESP48681 1621 aa15.5■□□□□ 0.07
SRP68-208ENST00000588736 RUSC2Q8N2Y8 1516 aa15.49■□□□□ 0.07
SRP68-208ENST00000588736 CEP164Q9UPV0 1460 aa15.49■□□□□ 0.07
SRP68-208ENST00000588736 FAM9AQ8IZU1 332 aaPredicted RBP15.48■□□□□ 0.07
SRP68-208ENST00000588736 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
SRP68-208ENST00000588736 KIF21AQ7Z4S6 1674 aa15.46■□□□□ 0.07
SRP68-208ENST00000588736 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
SRP68-208ENST00000588736 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
SRP68-208ENST00000588736 TOPBP1Q92547 1522 aa15.44■□□□□ 0.06
SRP68-208ENST00000588736 FGD5Q6ZNL6 1462 aa15.43■□□□□ 0.06
SRP68-208ENST00000588736 ERICH3Q5RHP9 1530 aa15.43■□□□□ 0.06
SRP68-208ENST00000588736 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
SRP68-208ENST00000588736 WDR97A6NE52 1622 aa15.41■□□□□ 0.06
SRP68-208ENST00000588736 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
SRP68-208ENST00000588736 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
SRP68-208ENST00000588736 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
SRP68-208ENST00000588736 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
SRP68-208ENST00000588736 ABCA10Q8WWZ4 1543 aa15.36■□□□□ 0.05
SRP68-208ENST00000588736 POLA1P09884 1462 aaPredicted RBP15.35■□□□□ 0.05
SRP68-208ENST00000588736 CUX2O14529 1486 aa15.31■□□□□ 0.04
SRP68-208ENST00000588736 MRC2Q9UBG0 1479 aa15.31■□□□□ 0.04
SRP68-208ENST00000588736 CEP162Q5TB80 1403 aa15.29■□□□□ 0.04
SRP68-208ENST00000588736 RAPGEF2Q9Y4G8 1499 aa15.29■□□□□ 0.04
SRP68-208ENST00000588736 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
SRP68-208ENST00000588736 CUL7Q14999 1698 aa15.27■□□□□ 0.04
SRP68-208ENST00000588736 WDR62O43379 1518 aa15.27■□□□□ 0.04
SRP68-208ENST00000588736 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
SRP68-208ENST00000588736 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
SRP68-208ENST00000588736 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
SRP68-208ENST00000588736 IGF1RP08069 1367 aa15.22■□□□□ 0.03
SRP68-208ENST00000588736 THOC2Q8NI27 1593 aaKnown RBP15.21■□□□□ 0.03
SRP68-208ENST00000588736 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
SRP68-208ENST00000588736 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
SRP68-208ENST00000588736 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
SRP68-208ENST00000588736 CLIP1P30622 1438 aa15.15■□□□□ 0.02
SRP68-208ENST00000588736 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
SRP68-208ENST00000588736 CARMIL1Q5VZK9 1371 aa15.14■□□□□ 0.01
SRP68-208ENST00000588736 GAPVD1Q14C86 1478 aa15.12■□□□□ 0.01
SRP68-208ENST00000588736 CTTNBP2Q8WZ74 1663 aa15.12■□□□□ 0.01
SRP68-208ENST00000588736 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
SRP68-208ENST00000588736 VPS8Q8N3P4 1428 aa15.08■□□□□ 0
SRP68-208ENST00000588736 ADAMTS12P58397 1594 aa15.06■□□□□ 0
SRP68-208ENST00000588736 ARAP1Q96P48 1450 aa15.04■□□□□ -0
SRP68-208ENST00000588736 GRIN2BQ13224 1484 aa15.02■□□□□ -0
SRP68-208ENST00000588736 EFCAB5A4FU69 1503 aa15.02■□□□□ -0
SRP68-208ENST00000588736 TDRD9Q8NDG6 1382 aaKnown RBP15.02□□□□□ -0.01
SRP68-208ENST00000588736 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
SRP68-208ENST00000588736 ARHGAP35Q9NRY4 1499 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms