RNA–Protein interactions for RNA: ENST00000588463.1

VASP-206, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 2

Gene VASP, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-206ENST00000588463 NISCHQ9Y2I1 1504 aa29■■■□□ 2.23
VASP-206ENST00000588463 ABCC9O60706 1549 aa25.92■■□□□ 1.74
VASP-206ENST00000588463 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
VASP-206ENST00000588463 RB1CC1Q8TDY2 1594 aa24.63■■□□□ 1.53
VASP-206ENST00000588463 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
VASP-206ENST00000588463 NACADO15069 1562 aa24.46■■□□□ 1.51
VASP-206ENST00000588463 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
VASP-206ENST00000588463 PABPN1Q86U42 306 aaKnown RBP eCLIP24.19■■□□□ 1.46
VASP-206ENST00000588463 UNC13AQ9UPW8 1703 aa24.17■■□□□ 1.46
VASP-206ENST00000588463 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
VASP-206ENST00000588463 ZCCHC6Q5VYS8 1495 aaKnown RBP24.06■■□□□ 1.44
VASP-206ENST00000588463 BICRAQ9NZM4 1560 aa23.95■■□□□ 1.42
VASP-206ENST00000588463 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
VASP-206ENST00000588463 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
VASP-206ENST00000588463 SHROOM4Q9ULL8 1493 aa23.46■■□□□ 1.35
VASP-206ENST00000588463 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
VASP-206ENST00000588463 EIF4G1Q04637 1599 aaKnown RBP23.33■■□□□ 1.33
VASP-206ENST00000588463 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
VASP-206ENST00000588463 SMARCA4P51532 1647 aa22.61■■□□□ 1.21
VASP-206ENST00000588463 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
VASP-206ENST00000588463 ATAD2BQ9ULI0 1458 aa22.59■■□□□ 1.21
VASP-206ENST00000588463 SMARCA2P51531 1590 aa22.49■■□□□ 1.19
VASP-206ENST00000588463 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
VASP-206ENST00000588463 HMGXB3Q12766 1538 aa22.42■■□□□ 1.18
VASP-206ENST00000588463 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
VASP-206ENST00000588463 BAZ1BQ9UIG0 1483 aaKnown RBP22.38■■□□□ 1.17
VASP-206ENST00000588463 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
VASP-206ENST00000588463 NESP48681 1621 aa22.31■■□□□ 1.16
VASP-206ENST00000588463 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
VASP-206ENST00000588463 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
VASP-206ENST00000588463 WIZO95785 1651 aa22.18■■□□□ 1.14
VASP-206ENST00000588463 CUX2O14529 1486 aa22.15■■□□□ 1.14
VASP-206ENST00000588463 LAMC3Q9Y6N6 1575 aa22.07■■□□□ 1.12
VASP-206ENST00000588463 KIF21AQ7Z4S6 1674 aa22.02■■□□□ 1.12
VASP-206ENST00000588463 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
VASP-206ENST00000588463 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
VASP-206ENST00000588463 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
VASP-206ENST00000588463 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
VASP-206ENST00000588463 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
VASP-206ENST00000588463 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
VASP-206ENST00000588463 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
VASP-206ENST00000588463 MRC2Q9UBG0 1479 aa21.76■■□□□ 1.07
VASP-206ENST00000588463 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
VASP-206ENST00000588463 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
VASP-206ENST00000588463 CFTRP13569 1480 aa21.71■■□□□ 1.07
VASP-206ENST00000588463 WDR62O43379 1518 aa21.69■■□□□ 1.06
VASP-206ENST00000588463 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
VASP-206ENST00000588463 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
VASP-206ENST00000588463 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
VASP-206ENST00000588463 CHIC1Q5VXU3 224 aa21.51■■□□□ 1.03
VASP-206ENST00000588463 TOPBP1Q92547 1522 aa21.33■■□□□ 1
VASP-206ENST00000588463 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
VASP-206ENST00000588463 TRIM41Q8WV44 630 aa21.25■□□□□ 0.99
VASP-206ENST00000588463 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
VASP-206ENST00000588463 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
VASP-206ENST00000588463 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
VASP-206ENST00000588463 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
VASP-206ENST00000588463 EIF4G3O43432 1585 aaKnown RBP21.14■□□□□ 0.98
VASP-206ENST00000588463 TARBP1Q13395 1621 aaKnown RBP21.12■□□□□ 0.97
VASP-206ENST00000588463 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.972e-11■■■■■ 49.1
VASP-206ENST00000588463 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
VASP-206ENST00000588463 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
VASP-206ENST00000588463 CUX1P39880 1505 aa21.04■□□□□ 0.96
VASP-206ENST00000588463 SOGA1O94964 1423 aa21.04■□□□□ 0.96
VASP-206ENST00000588463 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
VASP-206ENST00000588463 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
VASP-206ENST00000588463 FBLN2P98095 1184 aa21■□□□□ 0.95
VASP-206ENST00000588463 CHD1O14646 1710 aa21■□□□□ 0.95
VASP-206ENST00000588463 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
VASP-206ENST00000588463 RIMBP3BA6NNM3 1639 aa20.96■□□□□ 0.95
VASP-206ENST00000588463 RIMBP3Q9UFD9 1639 aa20.96■□□□□ 0.95
VASP-206ENST00000588463 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
VASP-206ENST00000588463 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
VASP-206ENST00000588463 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
VASP-206ENST00000588463 GRIN2BQ13224 1484 aa20.8■□□□□ 0.92
VASP-206ENST00000588463 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
VASP-206ENST00000588463 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
VASP-206ENST00000588463 PBRM1Q86U86 1689 aa20.79■□□□□ 0.92
VASP-206ENST00000588463 GAPVD1Q14C86 1478 aa20.76■□□□□ 0.91
VASP-206ENST00000588463 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
VASP-206ENST00000588463 ABCA10Q8WWZ4 1543 aa20.74■□□□□ 0.91
VASP-206ENST00000588463 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
VASP-206ENST00000588463 ABCA5Q8WWZ7 1642 aa20.72■□□□□ 0.91
VASP-206ENST00000588463 WRNQ14191 1432 aaPredicted RBP eCLIP20.71■□□□□ 0.91
VASP-206ENST00000588463 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
VASP-206ENST00000588463 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
VASP-206ENST00000588463 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
VASP-206ENST00000588463 TOP2BQ02880 1626 aa20.7■□□□□ 0.9
VASP-206ENST00000588463 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
VASP-206ENST00000588463 ADAMTS12P58397 1594 aa20.56■□□□□ 0.88
VASP-206ENST00000588463 GRIN2AQ12879 1464 aa20.55■□□□□ 0.88
VASP-206ENST00000588463 TRHP20396 242 aaPredicted RBP20.53■□□□□ 0.88
VASP-206ENST00000588463 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
VASP-206ENST00000588463 ERCC6L2Q5T890 1561 aa20.48■□□□□ 0.87
VASP-206ENST00000588463 FHAD1B1AJZ9 1412 aa20.48■□□□□ 0.87
VASP-206ENST00000588463 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
VASP-206ENST00000588463 NUP160Q12769 1436 aa20.44■□□□□ 0.86
VASP-206ENST00000588463 SHROOM2Q13796 1616 aa20.34■□□□□ 0.85
VASP-206ENST00000588463 EEA1Q15075 1411 aa20.33■□□□□ 0.84
VASP-206ENST00000588463 IGF1RP08069 1367 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms