RNA–Protein interactions for RNA: ENST00000588393.5

SLC44A2-206, Transcript of solute carrier family 44 member 2, humanhuman

TSL 5

Gene SLC44A2, Length 1,154 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-206ENST00000588393 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.08
SLC44A2-206ENST00000588393 ABCC9O60706 1549 aa25.14■■□□□ 1.62
SLC44A2-206ENST00000588393 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
SLC44A2-206ENST00000588393 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
SLC44A2-206ENST00000588393 DNAJC5BQ9UF47 199 aa23.82■■□□□ 1.4
SLC44A2-206ENST00000588393 NACADO15069 1562 aa23.78■■□□□ 1.4
SLC44A2-206ENST00000588393 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
SLC44A2-206ENST00000588393 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
SLC44A2-206ENST00000588393 PABPN1Q86U42 306 aaKnown RBP eCLIP23.51■■□□□ 1.35
SLC44A2-206ENST00000588393 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
SLC44A2-206ENST00000588393 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
SLC44A2-206ENST00000588393 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
SLC44A2-206ENST00000588393 UNC13AQ9UPW8 1703 aa23.13■■□□□ 1.29
SLC44A2-206ENST00000588393 SHROOM4Q9ULL8 1493 aa22.96■■□□□ 1.27
SLC44A2-206ENST00000588393 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
SLC44A2-206ENST00000588393 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
SLC44A2-206ENST00000588393 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
SLC44A2-206ENST00000588393 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
SLC44A2-206ENST00000588393 NCAPD3P42695 1498 aa22.08■■□□□ 1.12
SLC44A2-206ENST00000588393 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
SLC44A2-206ENST00000588393 DNAJC5Q9H3Z4 198 aa21.85■■□□□ 1.09
SLC44A2-206ENST00000588393 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
SLC44A2-206ENST00000588393 SMARCA4P51532 1647 aa21.79■■□□□ 1.08
SLC44A2-206ENST00000588393 HMGXB3Q12766 1538 aa21.77■■□□□ 1.08
SLC44A2-206ENST00000588393 BAZ1AQ9NRL2 1556 aaPredicted RBP21.72■■□□□ 1.07
SLC44A2-206ENST00000588393 CUX2O14529 1486 aa21.7■■□□□ 1.06
SLC44A2-206ENST00000588393 PEG3Q9GZU2 1588 aa21.67■■□□□ 1.06
SLC44A2-206ENST00000588393 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
SLC44A2-206ENST00000588393 BAZ1BQ9UIG0 1483 aaKnown RBP21.64■■□□□ 1.06
SLC44A2-206ENST00000588393 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
SLC44A2-206ENST00000588393 NESP48681 1621 aa21.61■■□□□ 1.05
SLC44A2-206ENST00000588393 LAMC3Q9Y6N6 1575 aa21.4■■□□□ 1.02
SLC44A2-206ENST00000588393 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
SLC44A2-206ENST00000588393 PDS5BQ9NTI5 1447 aa21.38■■□□□ 1.01
SLC44A2-206ENST00000588393 AEBP2Q6ZN18 517 aaPredicted RBP21.37■■□□□ 1.01
SLC44A2-206ENST00000588393 THOC2Q8NI27 1593 aaKnown RBP21.3■■□□□ 1
SLC44A2-206ENST00000588393 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
SLC44A2-206ENST00000588393 WIZO95785 1651 aa21.22■□□□□ 0.99
SLC44A2-206ENST00000588393 MRC2Q9UBG0 1479 aa21.14■□□□□ 0.98
SLC44A2-206ENST00000588393 CFTRP13569 1480 aa21.13■□□□□ 0.97
SLC44A2-206ENST00000588393 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
SLC44A2-206ENST00000588393 WDR62O43379 1518 aa21.09■□□□□ 0.97
SLC44A2-206ENST00000588393 FANCD2Q9BXW9 1451 aa21.06■□□□□ 0.96
SLC44A2-206ENST00000588393 TOP2AP11388 1531 aaKnown RBP21.03■□□□□ 0.96
SLC44A2-206ENST00000588393 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
SLC44A2-206ENST00000588393 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
SLC44A2-206ENST00000588393 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.94
SLC44A2-206ENST00000588393 OSCARQ8IYS5 282 aa20.8■□□□□ 0.92
SLC44A2-206ENST00000588393 TRIM41Q8WV44 630 aa20.72■□□□□ 0.91
SLC44A2-206ENST00000588393 IFT140Q96RY7 1462 aa20.68■□□□□ 0.9
SLC44A2-206ENST00000588393 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
SLC44A2-206ENST00000588393 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
SLC44A2-206ENST00000588393 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
SLC44A2-206ENST00000588393 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
SLC44A2-206ENST00000588393 CHIC1Q5VXU3 224 aa20.59■□□□□ 0.89
SLC44A2-206ENST00000588393 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
SLC44A2-206ENST00000588393 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
SLC44A2-206ENST00000588393 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■■■□□ 18.7
SLC44A2-206ENST00000588393 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
SLC44A2-206ENST00000588393 TARBP1Q13395 1621 aaKnown RBP20.43■□□□□ 0.86
SLC44A2-206ENST00000588393 SOGA1O94964 1423 aa20.4■□□□□ 0.86
SLC44A2-206ENST00000588393 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
SLC44A2-206ENST00000588393 EIF4G3O43432 1585 aaKnown RBP20.38■□□□□ 0.85
SLC44A2-206ENST00000588393 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
SLC44A2-206ENST00000588393 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
SLC44A2-206ENST00000588393 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
SLC44A2-206ENST00000588393 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
SLC44A2-206ENST00000588393 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
SLC44A2-206ENST00000588393 CUX1P39880 1505 aa20.3■□□□□ 0.84
SLC44A2-206ENST00000588393 FBLN2P98095 1184 aa20.29■□□□□ 0.84
SLC44A2-206ENST00000588393 FGD5Q6ZNL6 1462 aa20.29■□□□□ 0.84
SLC44A2-206ENST00000588393 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
SLC44A2-206ENST00000588393 SNAPC4Q5SXM2 1469 aa20.2■□□□□ 0.82
SLC44A2-206ENST00000588393 CHMP7Q8WUX9 453 aaPredicted RBP20.2■□□□□ 0.82
SLC44A2-206ENST00000588393 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
SLC44A2-206ENST00000588393 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
SLC44A2-206ENST00000588393 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
SLC44A2-206ENST00000588393 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
SLC44A2-206ENST00000588393 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
SLC44A2-206ENST00000588393 CHD1O14646 1710 aa20.12■□□□□ 0.81
SLC44A2-206ENST00000588393 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
SLC44A2-206ENST00000588393 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
SLC44A2-206ENST00000588393 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
SLC44A2-206ENST00000588393 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
SLC44A2-206ENST00000588393 SYNJ1O43426 1573 aa20.01■□□□□ 0.79
SLC44A2-206ENST00000588393 ABCA5Q8WWZ7 1642 aa19.97■□□□□ 0.79
SLC44A2-206ENST00000588393 TRHP20396 242 aaPredicted RBP19.96■□□□□ 0.79
SLC44A2-206ENST00000588393 NUP160Q12769 1436 aa19.92■□□□□ 0.78
SLC44A2-206ENST00000588393 GRIN2AQ12879 1464 aa19.91■□□□□ 0.78
SLC44A2-206ENST00000588393 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
SLC44A2-206ENST00000588393 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.77
SLC44A2-206ENST00000588393 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
SLC44A2-206ENST00000588393 PBRM1Q86U86 1689 aa19.84■□□□□ 0.77
SLC44A2-206ENST00000588393 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
SLC44A2-206ENST00000588393 ADAMTS12P58397 1594 aa19.81■□□□□ 0.76
SLC44A2-206ENST00000588393 CEP170Q5SW79 1584 aa19.78■□□□□ 0.76
SLC44A2-206ENST00000588393 ERCC6L2Q5T890 1561 aa19.78■□□□□ 0.76
SLC44A2-206ENST00000588393 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
SLC44A2-206ENST00000588393 IGF1RP08069 1367 aa19.73■□□□□ 0.75
SLC44A2-206ENST00000588393 SHROOM2Q13796 1616 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms