RNA–Protein interactions for RNA: ENST00000588340.1

EFTUD2-210, Transcript of elongation factor Tu GTP binding domain containing 2, humanhuman

TSL 4

Gene EFTUD2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFTUD2-210ENST00000588340 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
EFTUD2-210ENST00000588340 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
EFTUD2-210ENST00000588340 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
EFTUD2-210ENST00000588340 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
EFTUD2-210ENST00000588340 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
EFTUD2-210ENST00000588340 ABCC9O60706 1549 aa15.01□□□□□ -0.01
EFTUD2-210ENST00000588340 SENP3Q9H4L4 574 aaPredicted RBP14.56□□□□□ -0.08
EFTUD2-210ENST00000588340 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
EFTUD2-210ENST00000588340 NACADO15069 1562 aa14.3□□□□□ -0.12
EFTUD2-210ENST00000588340 DCAF8L2P0C7V8 631 aa14.24□□□□□ -0.13
EFTUD2-210ENST00000588340 PHF23Q9BUL5 403 aaPredicted RBP14.15□□□□□ -0.14
EFTUD2-210ENST00000588340 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
EFTUD2-210ENST00000588340 UNC13AQ9UPW8 1703 aa14.11□□□□□ -0.15
EFTUD2-210ENST00000588340 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
EFTUD2-210ENST00000588340 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
EFTUD2-210ENST00000588340 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
EFTUD2-210ENST00000588340 DNAJC5BQ9UF47 199 aa13.96□□□□□ -0.17
EFTUD2-210ENST00000588340 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
EFTUD2-210ENST00000588340 SCRIBQ14160 1630 aa13.82□□□□□ -0.2
EFTUD2-210ENST00000588340 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
EFTUD2-210ENST00000588340 FOXD1Q16676 465 aa13.72□□□□□ -0.21
EFTUD2-210ENST00000588340 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
EFTUD2-210ENST00000588340 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.23
EFTUD2-210ENST00000588340 CECR2Q9BXF3 1484 aa13.51□□□□□ -0.25
EFTUD2-210ENST00000588340 MSH5O43196 834 aa13.38□□□□□ -0.27
EFTUD2-210ENST00000588340 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
EFTUD2-210ENST00000588340 NCAPD3P42695 1498 aa13.19□□□□□ -0.3
EFTUD2-210ENST00000588340 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
EFTUD2-210ENST00000588340 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
EFTUD2-210ENST00000588340 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
EFTUD2-210ENST00000588340 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
EFTUD2-210ENST00000588340 PEG3Q9GZU2 1588 aa13.08□□□□□ -0.32
EFTUD2-210ENST00000588340 MROH2BQ7Z745 1585 aa13.07□□□□□ -0.32
EFTUD2-210ENST00000588340 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
EFTUD2-210ENST00000588340 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
EFTUD2-210ENST00000588340 NESP48681 1621 aa12.95□□□□□ -0.34
EFTUD2-210ENST00000588340 WIZO95785 1651 aa12.94□□□□□ -0.34
EFTUD2-210ENST00000588340 LAMC3Q9Y6N6 1575 aa12.89□□□□□ -0.35
EFTUD2-210ENST00000588340 CUX2O14529 1486 aa12.88□□□□□ -0.35
EFTUD2-210ENST00000588340 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
EFTUD2-210ENST00000588340 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
EFTUD2-210ENST00000588340 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
EFTUD2-210ENST00000588340 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
EFTUD2-210ENST00000588340 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
EFTUD2-210ENST00000588340 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
EFTUD2-210ENST00000588340 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
EFTUD2-210ENST00000588340 CFTRP13569 1480 aa12.68□□□□□ -0.38
EFTUD2-210ENST00000588340 MRC2Q9UBG0 1479 aa12.66□□□□□ -0.38
EFTUD2-210ENST00000588340 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
EFTUD2-210ENST00000588340 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
EFTUD2-210ENST00000588340 WDR62O43379 1518 aa12.64□□□□□ -0.39
EFTUD2-210ENST00000588340 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
EFTUD2-210ENST00000588340 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
EFTUD2-210ENST00000588340 URB2Q14146 1524 aaKnown RBP12.54□□□□□ -0.4
EFTUD2-210ENST00000588340 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
EFTUD2-210ENST00000588340 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
EFTUD2-210ENST00000588340 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
EFTUD2-210ENST00000588340 DNMBPQ6XZF7 1577 aa12.4□□□□□ -0.42
EFTUD2-210ENST00000588340 IFT140Q96RY7 1462 aa12.39□□□□□ -0.43
EFTUD2-210ENST00000588340 SUPT5HO00267 1087 aaKnown RBP12.37□□□□□ -0.43
EFTUD2-210ENST00000588340 ZNF608Q9ULD9 1512 aaPredicted RBP12.36□□□□□ -0.43
EFTUD2-210ENST00000588340 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.44
EFTUD2-210ENST00000588340 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
EFTUD2-210ENST00000588340 EIF4G3O43432 1585 aaKnown RBP12.31□□□□□ -0.44
EFTUD2-210ENST00000588340 POLA1P09884 1462 aaPredicted RBP12.31□□□□□ -0.44
EFTUD2-210ENST00000588340 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
EFTUD2-210ENST00000588340 CUX1P39880 1505 aa12.27□□□□□ -0.45
EFTUD2-210ENST00000588340 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.454e-6■■■□□ 14.8
EFTUD2-210ENST00000588340 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
EFTUD2-210ENST00000588340 SOGA1O94964 1423 aa12.25□□□□□ -0.45
EFTUD2-210ENST00000588340 FGD5Q6ZNL6 1462 aa12.25□□□□□ -0.45
EFTUD2-210ENST00000588340 CHD1O14646 1710 aa12.23□□□□□ -0.45
EFTUD2-210ENST00000588340 TDRD9Q8NDG6 1382 aaKnown RBP12.21□□□□□ -0.45
EFTUD2-210ENST00000588340 WDR97A6NE52 1622 aa12.21□□□□□ -0.46
EFTUD2-210ENST00000588340 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
EFTUD2-210ENST00000588340 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
EFTUD2-210ENST00000588340 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
EFTUD2-210ENST00000588340 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
EFTUD2-210ENST00000588340 FBLN2P98095 1184 aa12.15□□□□□ -0.46
EFTUD2-210ENST00000588340 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
EFTUD2-210ENST00000588340 BIVM-ERCC5R4GMW8 1640 aa12.14□□□□□ -0.47
EFTUD2-210ENST00000588340 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
EFTUD2-210ENST00000588340 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
EFTUD2-210ENST00000588340 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
EFTUD2-210ENST00000588340 ABCA10Q8WWZ4 1543 aa12.12□□□□□ -0.47
EFTUD2-210ENST00000588340 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
EFTUD2-210ENST00000588340 MAGI1Q96QZ7 1491 aaPredicted RBP12.12□□□□□ -0.47
EFTUD2-210ENST00000588340 GAPVD1Q14C86 1478 aa12.11□□□□□ -0.47
EFTUD2-210ENST00000588340 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
EFTUD2-210ENST00000588340 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
EFTUD2-210ENST00000588340 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
EFTUD2-210ENST00000588340 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
EFTUD2-210ENST00000588340 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
EFTUD2-210ENST00000588340 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
EFTUD2-210ENST00000588340 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
EFTUD2-210ENST00000588340 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
EFTUD2-210ENST00000588340 ADAMTS12P58397 1594 aa11.99□□□□□ -0.49
EFTUD2-210ENST00000588340 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
EFTUD2-210ENST00000588340 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
EFTUD2-210ENST00000588340 FHAD1B1AJZ9 1412 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms