RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.19
SMAD7-206ENST00000588190 ABCC9O60706 1549 aa31.75■■■□□ 2.67
SMAD7-206ENST00000588190 CCDC180Q9P1Z9 1646 aa31.4■■■□□ 2.62
SMAD7-206ENST00000588190 RB1CC1Q8TDY2 1594 aa30.06■■■□□ 2.4
SMAD7-206ENST00000588190 DCAF8L2P0C7V8 631 aa30.02■■■□□ 2.4
SMAD7-206ENST00000588190 DNAJC5BQ9UF47 199 aa29.87■■■□□ 2.37
SMAD7-206ENST00000588190 NACADO15069 1562 aa29.77■■■□□ 2.36
SMAD7-206ENST00000588190 PABPN1Q86U42 306 aaKnown RBP eCLIP29.63■■■□□ 2.33
SMAD7-206ENST00000588190 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
SMAD7-206ENST00000588190 MYO15BQ96JP2 1530 aa29.18■■■□□ 2.26
SMAD7-206ENST00000588190 BICRAQ9NZM4 1560 aa29.1■■■□□ 2.25
SMAD7-206ENST00000588190 ZCCHC6Q5VYS8 1495 aaKnown RBP28.94■■■□□ 2.22
SMAD7-206ENST00000588190 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
SMAD7-206ENST00000588190 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
SMAD7-206ENST00000588190 SHROOM4Q9ULL8 1493 aa28.62■■■□□ 2.17
SMAD7-206ENST00000588190 CC2D2AQ9P2K1 1620 aa28.59■■■□□ 2.17
SMAD7-206ENST00000588190 CECR2Q9BXF3 1484 aa28.57■■■□□ 2.16
SMAD7-206ENST00000588190 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
SMAD7-206ENST00000588190 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
SMAD7-206ENST00000588190 NCAPD3P42695 1498 aa27.47■■□□□ 1.99
SMAD7-206ENST00000588190 ERCC6Q03468 1493 aa27.47■■□□□ 1.99
SMAD7-206ENST00000588190 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
SMAD7-206ENST00000588190 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
SMAD7-206ENST00000588190 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
SMAD7-206ENST00000588190 CUX2O14529 1486 aa27.29■■□□□ 1.96
SMAD7-206ENST00000588190 HMGXB3Q12766 1538 aa27.23■■□□□ 1.95
SMAD7-206ENST00000588190 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
SMAD7-206ENST00000588190 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
SMAD7-206ENST00000588190 NESP48681 1621 aa27.19■■□□□ 1.94
SMAD7-206ENST00000588190 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.91
SMAD7-206ENST00000588190 PEG3Q9GZU2 1588 aa26.97■■□□□ 1.91
SMAD7-206ENST00000588190 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
SMAD7-206ENST00000588190 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
SMAD7-206ENST00000588190 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
SMAD7-206ENST00000588190 KIF21AQ7Z4S6 1674 aa26.8■■□□□ 1.88
SMAD7-206ENST00000588190 WIZO95785 1651 aa26.71■■□□□ 1.87
SMAD7-206ENST00000588190 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
SMAD7-206ENST00000588190 MRC2Q9UBG0 1479 aa26.57■■□□□ 1.84
SMAD7-206ENST00000588190 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
SMAD7-206ENST00000588190 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
SMAD7-206ENST00000588190 WDR62O43379 1518 aa26.44■■□□□ 1.82
SMAD7-206ENST00000588190 FANCD2Q9BXW9 1451 aa26.42■■□□□ 1.82
SMAD7-206ENST00000588190 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
SMAD7-206ENST00000588190 CFTRP13569 1480 aa26.31■■□□□ 1.8
SMAD7-206ENST00000588190 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
SMAD7-206ENST00000588190 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
SMAD7-206ENST00000588190 URB2Q14146 1524 aaKnown RBP26.17■■□□□ 1.78
SMAD7-206ENST00000588190 CCDC88BA6NC98 1476 aa26.06■■□□□ 1.76
SMAD7-206ENST00000588190 PRDM2Q13029 1718 aa26.02■■□□□ 1.76
SMAD7-206ENST00000588190 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
SMAD7-206ENST00000588190 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
SMAD7-206ENST00000588190 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
SMAD7-206ENST00000588190 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
SMAD7-206ENST00000588190 FBLN2P98095 1184 aa25.77■■□□□ 1.72
SMAD7-206ENST00000588190 RIMBP3CA6NJZ7 1639 aa25.75■■□□□ 1.71
SMAD7-206ENST00000588190 RIMBP3BA6NNM3 1639 aa25.75■■□□□ 1.71
SMAD7-206ENST00000588190 RIMBP3Q9UFD9 1639 aa25.75■■□□□ 1.71
SMAD7-206ENST00000588190 DNMBPQ6XZF7 1577 aa25.75■■□□□ 1.71
SMAD7-206ENST00000588190 EIF4G3O43432 1585 aaKnown RBP25.73■■□□□ 1.71
SMAD7-206ENST00000588190 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMAD7-206ENST00000588190 CYB5RLQ6IPT4 315 aa25.66■■□□□ 1.7
SMAD7-206ENST00000588190 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
SMAD7-206ENST00000588190 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
SMAD7-206ENST00000588190 TARBP1Q13395 1621 aaKnown RBP25.6■■□□□ 1.69
SMAD7-206ENST00000588190 CHD1O14646 1710 aa25.6■■□□□ 1.69
SMAD7-206ENST00000588190 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
SMAD7-206ENST00000588190 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
SMAD7-206ENST00000588190 SOGA1O94964 1423 aa25.56■■□□□ 1.68
SMAD7-206ENST00000588190 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
SMAD7-206ENST00000588190 CHMP7Q8WUX9 453 aaPredicted RBP25.46■■□□□ 1.67
SMAD7-206ENST00000588190 FGD5Q6ZNL6 1462 aa25.46■■□□□ 1.67
SMAD7-206ENST00000588190 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
SMAD7-206ENST00000588190 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
SMAD7-206ENST00000588190 ARAP1Q96P48 1450 aa25.38■■□□□ 1.65
SMAD7-206ENST00000588190 CUX1P39880 1505 aa25.37■■□□□ 1.65
SMAD7-206ENST00000588190 GRIN2BQ13224 1484 aa25.31■■□□□ 1.64
SMAD7-206ENST00000588190 MAGI1Q96QZ7 1491 aaPredicted RBP25.28■■□□□ 1.64
SMAD7-206ENST00000588190 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
SMAD7-206ENST00000588190 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
SMAD7-206ENST00000588190 SYNJ2O15056 1496 aa25.22■■□□□ 1.63
SMAD7-206ENST00000588190 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
SMAD7-206ENST00000588190 CLASP1Q7Z460 1538 aa25.21■■□□□ 1.63
SMAD7-206ENST00000588190 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
SMAD7-206ENST00000588190 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
SMAD7-206ENST00000588190 WRNQ14191 1432 aaPredicted RBP eCLIP25.05■■□□□ 1.6
SMAD7-206ENST00000588190 ABCA5Q8WWZ7 1642 aa25.04■■□□□ 1.6
SMAD7-206ENST00000588190 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
SMAD7-206ENST00000588190 TOP2BQ02880 1626 aa24.91■■□□□ 1.58
SMAD7-206ENST00000588190 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
SMAD7-206ENST00000588190 AEBP2Q6ZN18 517 aaPredicted RBP24.89■■□□□ 1.58
SMAD7-206ENST00000588190 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
SMAD7-206ENST00000588190 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
SMAD7-206ENST00000588190 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
SMAD7-206ENST00000588190 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
SMAD7-206ENST00000588190 NUP160Q12769 1436 aa24.83■■□□□ 1.57
SMAD7-206ENST00000588190 ERICH3Q5RHP9 1530 aa24.77■■□□□ 1.56
SMAD7-206ENST00000588190 JPH4Q96JJ6 628 aa24.74■■□□□ 1.55
SMAD7-206ENST00000588190 PRG4Q92954 1404 aaPredicted RBP24.73■■□□□ 1.55
SMAD7-206ENST00000588190 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
SMAD7-206ENST00000588190 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms