RNA–Protein interactions for RNA: ENST00000588056.1

TUBG1-202, Transcript of tubulin gamma 1, humanhuman

TSL 2

Gene TUBG1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1-202ENST00000588056 NISCHQ9Y2I1 1504 aa49.26■■■■■ 5.48
TUBG1-202ENST00000588056 ABCC9O60706 1549 aa44.65■■■■■ 4.74
TUBG1-202ENST00000588056 CCDC180Q9P1Z9 1646 aa44.26■■■■■ 4.68
TUBG1-202ENST00000588056 RB1CC1Q8TDY2 1594 aa42.35■■■■■ 4.37
TUBG1-202ENST00000588056 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
TUBG1-202ENST00000588056 NACADO15069 1562 aa42■■■■■ 4.31
TUBG1-202ENST00000588056 DCAF8L2P0C7V8 631 aa41.89■■■■■ 4.3
TUBG1-202ENST00000588056 PABPN1Q86U42 306 aaKnown RBP eCLIP41.6■■■■■ 4.25
TUBG1-202ENST00000588056 MYO15BQ96JP2 1530 aa41.32■■■■■ 4.2
TUBG1-202ENST00000588056 UNC13AQ9UPW8 1703 aa41.24■■■■■ 4.19
TUBG1-202ENST00000588056 BICRAQ9NZM4 1560 aa41.08■■■■■ 4.17
TUBG1-202ENST00000588056 ZCCHC6Q5VYS8 1495 aaKnown RBP40.72■■■■■ 4.11
TUBG1-202ENST00000588056 DCAF1Q9Y4B6 1507 aa40.66■■■■■ 4.1
TUBG1-202ENST00000588056 SHROOM4Q9ULL8 1493 aa40.55■■■■■ 4.08
TUBG1-202ENST00000588056 SCRIBQ14160 1630 aa40.33■■■■■ 4.05
TUBG1-202ENST00000588056 CECR2Q9BXF3 1484 aa40.28■■■■■ 4.04
TUBG1-202ENST00000588056 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
TUBG1-202ENST00000588056 EIF4G1Q04637 1599 aaKnown RBP40.12■■■■■ 4.01
TUBG1-202ENST00000588056 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
TUBG1-202ENST00000588056 NCAPD3P42695 1498 aa38.81■■■■□ 3.8
TUBG1-202ENST00000588056 CUX2O14529 1486 aa38.62■■■■□ 3.77
TUBG1-202ENST00000588056 ERCC6Q03468 1493 aa38.62■■■■□ 3.77
TUBG1-202ENST00000588056 ATAD2BQ9ULI0 1458 aa38.62■■■■□ 3.77
TUBG1-202ENST00000588056 SMARCA2P51531 1590 aa38.5■■■■□ 3.75
TUBG1-202ENST00000588056 SMARCA4P51532 1647 aa38.45■■■■□ 3.75
TUBG1-202ENST00000588056 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
TUBG1-202ENST00000588056 BAZ1AQ9NRL2 1556 aaPredicted RBP38.26■■■■□ 3.72
TUBG1-202ENST00000588056 NESP48681 1621 aa38.25■■■■□ 3.71
TUBG1-202ENST00000588056 BAZ1BQ9UIG0 1483 aaKnown RBP38.24■■■■□ 3.71
TUBG1-202ENST00000588056 PEG3Q9GZU2 1588 aa38.08■■■■□ 3.69
TUBG1-202ENST00000588056 MROH2BQ7Z745 1585 aa37.93■■■■□ 3.66
TUBG1-202ENST00000588056 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
TUBG1-202ENST00000588056 THOC2Q8NI27 1593 aaKnown RBP37.85■■■■□ 3.65
TUBG1-202ENST00000588056 PDS5BQ9NTI5 1447 aa37.81■■■■□ 3.64
TUBG1-202ENST00000588056 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
TUBG1-202ENST00000588056 CADPSQ9ULU8 1353 aa37.65■■■■□ 3.62
TUBG1-202ENST00000588056 MRC2Q9UBG0 1479 aa37.45■■■■□ 3.59
TUBG1-202ENST00000588056 WIZO95785 1651 aa37.43■■■■□ 3.58
TUBG1-202ENST00000588056 WDR62O43379 1518 aa37.31■■■■□ 3.56
TUBG1-202ENST00000588056 CEP164Q9UPV0 1460 aa37.24■■■■□ 3.55
TUBG1-202ENST00000588056 TRIM41Q8WV44 630 aa37.21■■■■□ 3.55
TUBG1-202ENST00000588056 FANCD2Q9BXW9 1451 aa37.18■■■■□ 3.54
TUBG1-202ENST00000588056 CFTRP13569 1480 aa37.11■■■■□ 3.53
TUBG1-202ENST00000588056 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
TUBG1-202ENST00000588056 TOP2AP11388 1531 aaKnown RBP36.96■■■■□ 3.51
TUBG1-202ENST00000588056 OSCARQ8IYS5 282 aa36.94■■■■□ 3.5
TUBG1-202ENST00000588056 URB2Q14146 1524 aaKnown RBP36.85■■■■□ 3.49
TUBG1-202ENST00000588056 CCDC88BA6NC98 1476 aa36.6■■■■□ 3.45
TUBG1-202ENST00000588056 PRDM2Q13029 1718 aa36.56■■■■□ 3.44
TUBG1-202ENST00000588056 IFT140Q96RY7 1462 aa36.53■■■■□ 3.44
TUBG1-202ENST00000588056 ZNF608Q9ULD9 1512 aaPredicted RBP36.46■■■■□ 3.43
TUBG1-202ENST00000588056 TOPBP1Q92547 1522 aa36.42■■■■□ 3.42
TUBG1-202ENST00000588056 ABCC8Q09428 1581 aa36.38■■■■□ 3.41
TUBG1-202ENST00000588056 RIMBP3CA6NJZ7 1639 aa36.3■■■■□ 3.4
TUBG1-202ENST00000588056 RIMBP3BA6NNM3 1639 aa36.3■■■■□ 3.4
TUBG1-202ENST00000588056 RIMBP3Q9UFD9 1639 aa36.3■■■■□ 3.4
TUBG1-202ENST00000588056 DNMBPQ6XZF7 1577 aa36.23■■■■□ 3.39
TUBG1-202ENST00000588056 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
TUBG1-202ENST00000588056 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
TUBG1-202ENST00000588056 AQRO60306 1485 aaKnown RBP eCLIP36.14■■■■□ 3.388e-9■■■■□ 23
TUBG1-202ENST00000588056 CYB5RLQ6IPT4 315 aa36.08■■■■□ 3.37
TUBG1-202ENST00000588056 FBLN2P98095 1184 aa36.07■■■■□ 3.36
TUBG1-202ENST00000588056 TARBP1Q13395 1621 aaKnown RBP36.07■■■■□ 3.36
TUBG1-202ENST00000588056 POLA1P09884 1462 aaPredicted RBP36.02■■■■□ 3.36
TUBG1-202ENST00000588056 CHD1O14646 1710 aa35.95■■■■□ 3.35
TUBG1-202ENST00000588056 SOGA1O94964 1423 aa35.93■■■■□ 3.34
TUBG1-202ENST00000588056 RAD54L2Q9Y4B4 1467 aa35.92■■■■□ 3.34
TUBG1-202ENST00000588056 TDRD9Q8NDG6 1382 aaKnown RBP35.89■■■■□ 3.34
TUBG1-202ENST00000588056 ARAP1Q96P48 1450 aa35.8■■■■□ 3.32
TUBG1-202ENST00000588056 TRHP20396 242 aaPredicted RBP35.8■■■■□ 3.32
TUBG1-202ENST00000588056 FGD5Q6ZNL6 1462 aa35.75■■■■□ 3.31
TUBG1-202ENST00000588056 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
TUBG1-202ENST00000588056 SNAPC4Q5SXM2 1469 aa35.72■■■■□ 3.31
TUBG1-202ENST00000588056 WDR97A6NE52 1622 aa35.7■■■■□ 3.31
TUBG1-202ENST00000588056 CUX1P39880 1505 aa35.65■■■■□ 3.3
TUBG1-202ENST00000588056 MAGI1Q96QZ7 1491 aaPredicted RBP35.63■■■■□ 3.29
TUBG1-202ENST00000588056 GRIN2BQ13224 1484 aa35.62■■■■□ 3.29
TUBG1-202ENST00000588056 CLASP1Q7Z460 1538 aa35.57■■■■□ 3.29
TUBG1-202ENST00000588056 SYNJ1O43426 1573 aa35.57■■■■□ 3.28
TUBG1-202ENST00000588056 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
TUBG1-202ENST00000588056 GAPVD1Q14C86 1478 aa35.45■■■■□ 3.27
TUBG1-202ENST00000588056 ABCA10Q8WWZ4 1543 aa35.34■■■■□ 3.25
TUBG1-202ENST00000588056 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
TUBG1-202ENST00000588056 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
TUBG1-202ENST00000588056 ABCA5Q8WWZ7 1642 aa35.24■■■■□ 3.23
TUBG1-202ENST00000588056 WRNQ14191 1432 aaPredicted RBP eCLIP35.2■■■■□ 3.23
TUBG1-202ENST00000588056 GRIN2AQ12879 1464 aa35.13■■■■□ 3.21
TUBG1-202ENST00000588056 NUP160Q12769 1436 aa35.02■■■■□ 3.2
TUBG1-202ENST00000588056 AEBP2Q6ZN18 517 aaPredicted RBP35.01■■■■□ 3.2
TUBG1-202ENST00000588056 ADAMTS12P58397 1594 aa35■■■■□ 3.19
TUBG1-202ENST00000588056 FHAD1B1AJZ9 1412 aa35■■■■□ 3.19
TUBG1-202ENST00000588056 TOP2BQ02880 1626 aa34.99■■■■□ 3.19
TUBG1-202ENST00000588056 ERCC6L2Q5T890 1561 aa34.99■■■■□ 3.19
TUBG1-202ENST00000588056 CEP170Q5SW79 1584 aa34.97■■■■□ 3.19
TUBG1-202ENST00000588056 BIVM-ERCC5R4GMW8 1640 aa34.96■■■■□ 3.19
TUBG1-202ENST00000588056 ERICH3Q5RHP9 1530 aa34.89■■■■□ 3.18
TUBG1-202ENST00000588056 SHROOM2Q13796 1616 aa34.84■■■■□ 3.17
TUBG1-202ENST00000588056 JPH4Q96JJ6 628 aa34.78■■■■□ 3.16
TUBG1-202ENST00000588056 PRG4Q92954 1404 aaPredicted RBP34.77■■■■□ 3.16
TUBG1-202ENST00000588056 NPM1P06748 294 aaKnown RBP eCLIP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms