RNA–Protein interactions for RNA: ENST00000587911.5

CELF4-209, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 2

Gene CELF4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-209ENST00000587911 NISCHQ9Y2I1 1504 aa41.04■■■■■ 4.16
CELF4-209ENST00000587911 CCDC180Q9P1Z9 1646 aa36.92■■■■□ 3.5
CELF4-209ENST00000587911 ABCC9O60706 1549 aa36.29■■■■□ 3.4
CELF4-209ENST00000587911 RB1CC1Q8TDY2 1594 aa34.86■■■■□ 3.17
CELF4-209ENST00000587911 NACADO15069 1562 aa34.73■■■■□ 3.15
CELF4-209ENST00000587911 MYO15BQ96JP2 1530 aa34.45■■■■□ 3.11
CELF4-209ENST00000587911 UNC13AQ9UPW8 1703 aa34.25■■■■□ 3.07
CELF4-209ENST00000587911 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
CELF4-209ENST00000587911 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.04
CELF4-209ENST00000587911 DCAF8L2P0C7V8 631 aa34.04■■■■□ 3.04
CELF4-209ENST00000587911 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
CELF4-209ENST00000587911 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
CELF4-209ENST00000587911 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.98
CELF4-209ENST00000587911 SHROOM4Q9ULL8 1493 aa33.56■■■□□ 2.96
CELF4-209ENST00000587911 SCRIBQ14160 1630 aa33.39■■■□□ 2.94
CELF4-209ENST00000587911 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
CELF4-209ENST00000587911 EIF4G1Q04637 1599 aaKnown RBP32.98■■■□□ 2.87
CELF4-209ENST00000587911 CC2D2AQ9P2K1 1620 aa32.97■■■□□ 2.87
CELF4-209ENST00000587911 CECR2Q9BXF3 1484 aa32.74■■■□□ 2.83
CELF4-209ENST00000587911 SMARCA4P51532 1647 aa32■■■□□ 2.71
CELF4-209ENST00000587911 NCAPD3P42695 1498 aa32■■■□□ 2.71
CELF4-209ENST00000587911 ATAD2BQ9ULI0 1458 aa31.9■■■□□ 2.7
CELF4-209ENST00000587911 SMARCA2P51531 1590 aa31.88■■■□□ 2.69
CELF4-209ENST00000587911 HMGXB3Q12766 1538 aa31.87■■■□□ 2.69
CELF4-209ENST00000587911 BAZ1AQ9NRL2 1556 aaPredicted RBP31.86■■■□□ 2.69
CELF4-209ENST00000587911 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
CELF4-209ENST00000587911 CHIC1Q5VXU3 224 aa31.66■■■□□ 2.66
CELF4-209ENST00000587911 MROH2BQ7Z745 1585 aa31.57■■■□□ 2.64
CELF4-209ENST00000587911 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
CELF4-209ENST00000587911 CUX2O14529 1486 aa31.36■■■□□ 2.61
CELF4-209ENST00000587911 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
CELF4-209ENST00000587911 LAMC3Q9Y6N6 1575 aa31.3■■■□□ 2.6
CELF4-209ENST00000587911 NESP48681 1621 aa31.29■■■□□ 2.6
CELF4-209ENST00000587911 WIZO95785 1651 aa31.24■■■□□ 2.59
CELF4-209ENST00000587911 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
CELF4-209ENST00000587911 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
CELF4-209ENST00000587911 RSF1Q96T23 1441 aaPredicted RBP30.98■■■□□ 2.55
CELF4-209ENST00000587911 PDS5BQ9NTI5 1447 aa30.96■■■□□ 2.55
CELF4-209ENST00000587911 CADPSQ9ULU8 1353 aa30.94■■■□□ 2.54
CELF4-209ENST00000587911 TOP2AP11388 1531 aaKnown RBP30.9■■■□□ 2.54
CELF4-209ENST00000587911 DNAJC5Q9H3Z4 198 aa30.89■■■□□ 2.54
CELF4-209ENST00000587911 WDR62O43379 1518 aa30.73■■■□□ 2.51
CELF4-209ENST00000587911 CFTRP13569 1480 aa30.73■■■□□ 2.51
CELF4-209ENST00000587911 MRC2Q9UBG0 1479 aa30.72■■■□□ 2.51
CELF4-209ENST00000587911 PRDM2Q13029 1718 aa30.7■■■□□ 2.51
CELF4-209ENST00000587911 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
CELF4-209ENST00000587911 FANCD2Q9BXW9 1451 aa30.6■■■□□ 2.49
CELF4-209ENST00000587911 CCDC88BA6NC98 1476 aa30.44■■■□□ 2.46
CELF4-209ENST00000587911 URB2Q14146 1524 aaKnown RBP30.37■■■□□ 2.45
CELF4-209ENST00000587911 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
CELF4-209ENST00000587911 TOPBP1Q92547 1522 aa30.09■■■□□ 2.41
CELF4-209ENST00000587911 DNMBPQ6XZF7 1577 aa30.07■■■□□ 2.4
CELF4-209ENST00000587911 IFT140Q96RY7 1462 aa30.03■■■□□ 2.4
CELF4-209ENST00000587911 TARBP1Q13395 1621 aaKnown RBP29.91■■■□□ 2.38
CELF4-209ENST00000587911 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
CELF4-209ENST00000587911 EIF4G3O43432 1585 aaKnown RBP29.87■■■□□ 2.37
CELF4-209ENST00000587911 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
CELF4-209ENST00000587911 OSCARQ8IYS5 282 aa29.75■■■□□ 2.35
CELF4-209ENST00000587911 WDR97A6NE52 1622 aa29.73■■■□□ 2.35
CELF4-209ENST00000587911 CUX1P39880 1505 aa29.66■■■□□ 2.34
CELF4-209ENST00000587911 CHD1O14646 1710 aa29.64■■■□□ 2.34
CELF4-209ENST00000587911 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
CELF4-209ENST00000587911 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
CELF4-209ENST00000587911 RAD54L2Q9Y4B4 1467 aa29.58■■■□□ 2.33
CELF4-209ENST00000587911 SOGA1O94964 1423 aa29.56■■■□□ 2.32
CELF4-209ENST00000587911 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
CELF4-209ENST00000587911 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
CELF4-209ENST00000587911 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
CELF4-209ENST00000587911 SUPT5HO00267 1087 aaKnown RBP29.46■■■□□ 2.31
CELF4-209ENST00000587911 ARHGEF11O15085 1522 aa29.43■■■□□ 2.3
CELF4-209ENST00000587911 PBRM1Q86U86 1689 aa29.41■■■□□ 2.3
CELF4-209ENST00000587911 TDRD9Q8NDG6 1382 aaKnown RBP29.4■■■□□ 2.3
CELF4-209ENST00000587911 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
CELF4-209ENST00000587911 BIVM-ERCC5R4GMW8 1640 aa29.4■■■□□ 2.3
CELF4-209ENST00000587911 MAGI1Q96QZ7 1491 aaPredicted RBP29.4■■■□□ 2.3
CELF4-209ENST00000587911 ABCA5Q8WWZ7 1642 aa29.38■■■□□ 2.29
CELF4-209ENST00000587911 ABCA10Q8WWZ4 1543 aa29.37■■■□□ 2.29
CELF4-209ENST00000587911 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
CELF4-209ENST00000587911 GRIN2BQ13224 1484 aa29.36■■■□□ 2.29
CELF4-209ENST00000587911 TOP2BQ02880 1626 aa29.34■■■□□ 2.29
CELF4-209ENST00000587911 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
CELF4-209ENST00000587911 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
CELF4-209ENST00000587911 SYNJ2O15056 1496 aa29.26■■■□□ 2.27
CELF4-209ENST00000587911 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
CELF4-209ENST00000587911 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
CELF4-209ENST00000587911 ARAP1Q96P48 1450 aa29.15■■■□□ 2.26
CELF4-209ENST00000587911 FBLN2P98095 1184 aa29.14■■■□□ 2.26
CELF4-209ENST00000587911 ADAMTS12P58397 1594 aa29.09■■■□□ 2.25
CELF4-209ENST00000587911 CHMP7Q8WUX9 453 aaPredicted RBP29.08■■■□□ 2.25
CELF4-209ENST00000587911 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
CELF4-209ENST00000587911 GRIN2AQ12879 1464 aa29■■■□□ 2.23
CELF4-209ENST00000587911 NUP160Q12769 1436 aa28.94■■■□□ 2.22
CELF4-209ENST00000587911 CYB5RLQ6IPT4 315 aa28.94■■■□□ 2.22
CELF4-209ENST00000587911 CEP170Q5SW79 1584 aa28.92■■■□□ 2.22
CELF4-209ENST00000587911 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
CELF4-209ENST00000587911 SHROOM2Q13796 1616 aa28.9■■■□□ 2.22
CELF4-209ENST00000587911 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
CELF4-209ENST00000587911 CUL7Q14999 1698 aa28.7■■■□□ 2.19
CELF4-209ENST00000587911 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
CELF4-209ENST00000587911 KIF27Q86VH2 1401 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms