RNA–Protein interactions for RNA: ENST00000587811.1

GIPC1-207, Transcript of GIPC PDZ domain containing family member 1, humanhuman

Gene GIPC1, Length 1,717 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-207ENST00000587811 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
GIPC1-207ENST00000587811 CCDC180Q9P1Z9 1646 aa37.97■■■■□ 3.67
GIPC1-207ENST00000587811 ABCC9O60706 1549 aa37.13■■■■□ 3.53
GIPC1-207ENST00000587811 RB1CC1Q8TDY2 1594 aa35.7■■■■□ 3.31
GIPC1-207ENST00000587811 DCAF8L2P0C7V8 631 aa35.66■■■■□ 3.3
GIPC1-207ENST00000587811 NACADO15069 1562 aa35.64■■■■□ 3.3
GIPC1-207ENST00000587811 ZCCHC6Q5VYS8 1495 aaKnown RBP35.59■■■■□ 3.29
GIPC1-207ENST00000587811 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
GIPC1-207ENST00000587811 DCAF1Q9Y4B6 1507 aa35.29■■■■□ 3.24
GIPC1-207ENST00000587811 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
GIPC1-207ENST00000587811 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
GIPC1-207ENST00000587811 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
GIPC1-207ENST00000587811 BICRAQ9NZM4 1560 aa34.64■■■■□ 3.14
GIPC1-207ENST00000587811 SHROOM4Q9ULL8 1493 aa34.21■■■■□ 3.07
GIPC1-207ENST00000587811 DNAJC5BQ9UF47 199 aa33.99■■■■□ 3.03
GIPC1-207ENST00000587811 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
GIPC1-207ENST00000587811 CC2D2AQ9P2K1 1620 aa33.59■■■□□ 2.97
GIPC1-207ENST00000587811 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
GIPC1-207ENST00000587811 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
GIPC1-207ENST00000587811 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
GIPC1-207ENST00000587811 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
GIPC1-207ENST00000587811 ATAD2BQ9ULI0 1458 aa32.92■■■□□ 2.86
GIPC1-207ENST00000587811 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
GIPC1-207ENST00000587811 NCAPD3P42695 1498 aa32.86■■■□□ 2.85
GIPC1-207ENST00000587811 PEG3Q9GZU2 1588 aa32.8■■■□□ 2.84
GIPC1-207ENST00000587811 HMGXB3Q12766 1538 aa32.75■■■□□ 2.83
GIPC1-207ENST00000587811 BAZ1BQ9UIG0 1483 aaKnown RBP32.68■■■□□ 2.82
GIPC1-207ENST00000587811 WIZO95785 1651 aa32.62■■■□□ 2.81
GIPC1-207ENST00000587811 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
GIPC1-207ENST00000587811 TOP2AP11388 1531 aaKnown RBP32.23■■■□□ 2.75
GIPC1-207ENST00000587811 NESP48681 1621 aa32.15■■■□□ 2.74
GIPC1-207ENST00000587811 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
GIPC1-207ENST00000587811 ERCC6Q03468 1493 aa31.99■■■□□ 2.71
GIPC1-207ENST00000587811 CADPSQ9ULU8 1353 aa31.91■■■□□ 2.7
GIPC1-207ENST00000587811 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
GIPC1-207ENST00000587811 KIF21AQ7Z4S6 1674 aa31.82■■■□□ 2.68
GIPC1-207ENST00000587811 PDS5BQ9NTI5 1447 aa31.78■■■□□ 2.68
GIPC1-207ENST00000587811 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
GIPC1-207ENST00000587811 CFTRP13569 1480 aa31.75■■■□□ 2.67
GIPC1-207ENST00000587811 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
GIPC1-207ENST00000587811 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
GIPC1-207ENST00000587811 CUX2O14529 1486 aa31.59■■■□□ 2.65
GIPC1-207ENST00000587811 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
GIPC1-207ENST00000587811 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
GIPC1-207ENST00000587811 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
GIPC1-207ENST00000587811 WDR62O43379 1518 aa31.4■■■□□ 2.62
GIPC1-207ENST00000587811 URB2Q14146 1524 aaKnown RBP31.29■■■□□ 2.6
GIPC1-207ENST00000587811 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
GIPC1-207ENST00000587811 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
GIPC1-207ENST00000587811 ABCC8Q09428 1581 aa31.03■■■□□ 2.56
GIPC1-207ENST00000587811 CUX1P39880 1505 aa30.89■■■□□ 2.54
GIPC1-207ENST00000587811 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
GIPC1-207ENST00000587811 POLA1P09884 1462 aaPredicted RBP30.85■■■□□ 2.53
GIPC1-207ENST00000587811 FGD5Q6ZNL6 1462 aa30.78■■■□□ 2.52
GIPC1-207ENST00000587811 ZNF608Q9ULD9 1512 aaPredicted RBP30.77■■■□□ 2.52
GIPC1-207ENST00000587811 TARBP1Q13395 1621 aaKnown RBP30.77■■■□□ 2.52
GIPC1-207ENST00000587811 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
GIPC1-207ENST00000587811 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.5
GIPC1-207ENST00000587811 WRNQ14191 1432 aaPredicted RBP eCLIP30.69■■■□□ 2.5
GIPC1-207ENST00000587811 SOGA1O94964 1423 aa30.68■■■□□ 2.5
GIPC1-207ENST00000587811 SYNJ1O43426 1573 aa30.67■■■□□ 2.5
GIPC1-207ENST00000587811 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
GIPC1-207ENST00000587811 TOP2BQ02880 1626 aa30.64■■■□□ 2.5
GIPC1-207ENST00000587811 AQRO60306 1485 aaKnown RBP eCLIP30.58■■■□□ 2.49
GIPC1-207ENST00000587811 WDR97A6NE52 1622 aa30.57■■■□□ 2.48
GIPC1-207ENST00000587811 TDRD9Q8NDG6 1382 aaKnown RBP30.53■■■□□ 2.48
GIPC1-207ENST00000587811 DNAJC5Q9H3Z4 198 aa30.53■■■□□ 2.48
GIPC1-207ENST00000587811 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
GIPC1-207ENST00000587811 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
GIPC1-207ENST00000587811 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
GIPC1-207ENST00000587811 GAPVD1Q14C86 1478 aa30.34■■■□□ 2.45
GIPC1-207ENST00000587811 GRIN2BQ13224 1484 aa30.32■■■□□ 2.44
GIPC1-207ENST00000587811 SNAPC4Q5SXM2 1469 aa30.32■■■□□ 2.44
GIPC1-207ENST00000587811 CHD1O14646 1710 aa30.32■■■□□ 2.44
GIPC1-207ENST00000587811 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
GIPC1-207ENST00000587811 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
GIPC1-207ENST00000587811 FBLN2P98095 1184 aa30.2■■■□□ 2.43
GIPC1-207ENST00000587811 SYNJ2O15056 1496 aa30.14■■■□□ 2.42
GIPC1-207ENST00000587811 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
GIPC1-207ENST00000587811 CHMP7Q8WUX9 453 aaPredicted RBP30.09■■■□□ 2.41
GIPC1-207ENST00000587811 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
GIPC1-207ENST00000587811 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
GIPC1-207ENST00000587811 FHAD1B1AJZ9 1412 aa29.97■■■□□ 2.39
GIPC1-207ENST00000587811 TRIM41Q8WV44 630 aa29.96■■■□□ 2.39
GIPC1-207ENST00000587811 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
GIPC1-207ENST00000587811 CLASP1Q7Z460 1538 aa29.92■■■□□ 2.38
GIPC1-207ENST00000587811 RIMBP3CA6NJZ7 1639 aa29.87■■■□□ 2.37
GIPC1-207ENST00000587811 RIMBP3BA6NNM3 1639 aa29.87■■■□□ 2.37
GIPC1-207ENST00000587811 RIMBP3Q9UFD9 1639 aa29.87■■■□□ 2.37
GIPC1-207ENST00000587811 IGF1RP08069 1367 aa29.87■■■□□ 2.37
GIPC1-207ENST00000587811 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
GIPC1-207ENST00000587811 CUL7Q14999 1698 aa29.86■■■□□ 2.37
GIPC1-207ENST00000587811 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
GIPC1-207ENST00000587811 CEP170Q5SW79 1584 aa29.85■■■□□ 2.37
GIPC1-207ENST00000587811 RUSC2Q8N2Y8 1516 aa29.82■■■□□ 2.36
GIPC1-207ENST00000587811 NUP160Q12769 1436 aa29.8■■■□□ 2.36
GIPC1-207ENST00000587811 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.35
GIPC1-207ENST00000587811 ARAP1Q96P48 1450 aa29.61■■■□□ 2.33
GIPC1-207ENST00000587811 SHROOM2Q13796 1616 aa29.61■■■□□ 2.33
GIPC1-207ENST00000587811 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms