RNA–Protein interactions for RNA: ENST00000587561.1

LMAN1-202, Transcript of lectin, mannose binding 1, humanhuman

TSL 2

Gene LMAN1, Length 1,181 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMAN1-202ENST00000587561 NISCHQ9Y2I1 1504 aa34.46■■■■□ 3.11
LMAN1-202ENST00000587561 CCDC180Q9P1Z9 1646 aa30.66■■■□□ 2.5
LMAN1-202ENST00000587561 ABCC9O60706 1549 aa30.65■■■□□ 2.5
LMAN1-202ENST00000587561 DCAF8L2P0C7V8 631 aa29.23■■■□□ 2.27
LMAN1-202ENST00000587561 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
LMAN1-202ENST00000587561 AEBP2Q6ZN18 517 aaPredicted RBP29.17■■■□□ 2.26
LMAN1-202ENST00000587561 NACADO15069 1562 aa29.04■■■□□ 2.24
LMAN1-202ENST00000587561 MYO15BQ96JP2 1530 aa28.69■■■□□ 2.18
LMAN1-202ENST00000587561 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.18
LMAN1-202ENST00000587561 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
LMAN1-202ENST00000587561 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
LMAN1-202ENST00000587561 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
LMAN1-202ENST00000587561 UNC13AQ9UPW8 1703 aa28.37■■■□□ 2.13
LMAN1-202ENST00000587561 BICRAQ9NZM4 1560 aa28.29■■■□□ 2.12
LMAN1-202ENST00000587561 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
LMAN1-202ENST00000587561 CHIC1Q5VXU3 224 aa28.09■■■□□ 2.09
LMAN1-202ENST00000587561 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
LMAN1-202ENST00000587561 EIF4G1Q04637 1599 aaKnown RBP27.6■■■□□ 2.01
LMAN1-202ENST00000587561 CC2D2AQ9P2K1 1620 aa27.6■■■□□ 2.01
LMAN1-202ENST00000587561 CECR2Q9BXF3 1484 aa27.57■■■□□ 2
LMAN1-202ENST00000587561 NCAPD3P42695 1498 aa26.86■■□□□ 1.89
LMAN1-202ENST00000587561 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
LMAN1-202ENST00000587561 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
LMAN1-202ENST00000587561 SMARCA2P51531 1590 aa26.71■■□□□ 1.87
LMAN1-202ENST00000587561 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
LMAN1-202ENST00000587561 HMGXB3Q12766 1538 aa26.6■■□□□ 1.85
LMAN1-202ENST00000587561 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
LMAN1-202ENST00000587561 BAZ1BQ9UIG0 1483 aaKnown RBP26.58■■□□□ 1.85
LMAN1-202ENST00000587561 PEG3Q9GZU2 1588 aa26.49■■□□□ 1.83
LMAN1-202ENST00000587561 ERCC6Q03468 1493 aa26.45■■□□□ 1.82
LMAN1-202ENST00000587561 NESP48681 1621 aa26.38■■□□□ 1.81
LMAN1-202ENST00000587561 CUX2O14529 1486 aa26.23■■□□□ 1.79
LMAN1-202ENST00000587561 WIZO95785 1651 aa26.22■■□□□ 1.79
LMAN1-202ENST00000587561 RSF1Q96T23 1441 aaPredicted RBP26.16■■□□□ 1.78
LMAN1-202ENST00000587561 LAMC3Q9Y6N6 1575 aa26.14■■□□□ 1.78
LMAN1-202ENST00000587561 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
LMAN1-202ENST00000587561 PDS5BQ9NTI5 1447 aa26.09■■□□□ 1.77
LMAN1-202ENST00000587561 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
LMAN1-202ENST00000587561 THOC2Q8NI27 1593 aaKnown RBP25.94■■□□□ 1.74
LMAN1-202ENST00000587561 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
LMAN1-202ENST00000587561 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
LMAN1-202ENST00000587561 CFTRP13569 1480 aa25.81■■□□□ 1.72
LMAN1-202ENST00000587561 MRC2Q9UBG0 1479 aa25.81■■□□□ 1.72
LMAN1-202ENST00000587561 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
LMAN1-202ENST00000587561 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
LMAN1-202ENST00000587561 CCDC88BA6NC98 1476 aa25.7■■□□□ 1.7
LMAN1-202ENST00000587561 WDR62O43379 1518 aa25.68■■□□□ 1.7
LMAN1-202ENST00000587561 URB2Q14146 1524 aaKnown RBP25.53■■□□□ 1.68
LMAN1-202ENST00000587561 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
LMAN1-202ENST00000587561 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
LMAN1-202ENST00000587561 TOPBP1Q92547 1522 aa25.3■■□□□ 1.64
LMAN1-202ENST00000587561 IFT140Q96RY7 1462 aa25.25■■□□□ 1.63
LMAN1-202ENST00000587561 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
LMAN1-202ENST00000587561 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
LMAN1-202ENST00000587561 ZNF608Q9ULD9 1512 aaPredicted RBP25.21■■□□□ 1.63
LMAN1-202ENST00000587561 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
LMAN1-202ENST00000587561 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
LMAN1-202ENST00000587561 POLA1P09884 1462 aaPredicted RBP25.06■■□□□ 1.6
LMAN1-202ENST00000587561 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.62e-8■■■■□ 22.1
LMAN1-202ENST00000587561 SOGA1O94964 1423 aa25.02■■□□□ 1.6
LMAN1-202ENST00000587561 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
LMAN1-202ENST00000587561 TARBP1Q13395 1621 aaKnown RBP24.98■■□□□ 1.59
LMAN1-202ENST00000587561 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
LMAN1-202ENST00000587561 TDRD9Q8NDG6 1382 aaKnown RBP24.97■■□□□ 1.59
LMAN1-202ENST00000587561 CUX1P39880 1505 aa24.95■■□□□ 1.58
LMAN1-202ENST00000587561 FGD5Q6ZNL6 1462 aa24.95■■□□□ 1.58
LMAN1-202ENST00000587561 FBLN2P98095 1184 aa24.94■■□□□ 1.58
LMAN1-202ENST00000587561 SENP3Q9H4L4 574 aaPredicted RBP24.84■■□□□ 1.57
LMAN1-202ENST00000587561 CHMP7Q8WUX9 453 aaPredicted RBP24.76■■□□□ 1.55
LMAN1-202ENST00000587561 SNAPC4Q5SXM2 1469 aa24.75■■□□□ 1.55
LMAN1-202ENST00000587561 GRIN2BQ13224 1484 aa24.72■■□□□ 1.55
LMAN1-202ENST00000587561 WDR97A6NE52 1622 aa24.7■■□□□ 1.54
LMAN1-202ENST00000587561 RIMBP3CA6NJZ7 1639 aa24.7■■□□□ 1.54
LMAN1-202ENST00000587561 RIMBP3BA6NNM3 1639 aa24.7■■□□□ 1.54
LMAN1-202ENST00000587561 RIMBP3Q9UFD9 1639 aa24.7■■□□□ 1.54
LMAN1-202ENST00000587561 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
LMAN1-202ENST00000587561 CHD1O14646 1710 aa24.69■■□□□ 1.54
LMAN1-202ENST00000587561 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
LMAN1-202ENST00000587561 GAPVD1Q14C86 1478 aa24.68■■□□□ 1.54
LMAN1-202ENST00000587561 ABCA10Q8WWZ4 1543 aa24.66■■□□□ 1.54
LMAN1-202ENST00000587561 MAGI1Q96QZ7 1491 aaPredicted RBP24.66■■□□□ 1.54
LMAN1-202ENST00000587561 CYB5RLQ6IPT4 315 aa24.65■■□□□ 1.54
LMAN1-202ENST00000587561 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
LMAN1-202ENST00000587561 SYNJ2O15056 1496 aa24.59■■□□□ 1.53
LMAN1-202ENST00000587561 SYNJ1O43426 1573 aa24.57■■□□□ 1.52
LMAN1-202ENST00000587561 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
LMAN1-202ENST00000587561 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
LMAN1-202ENST00000587561 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
LMAN1-202ENST00000587561 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
LMAN1-202ENST00000587561 ARAP1Q96P48 1450 aa24.48■■□□□ 1.51
LMAN1-202ENST00000587561 CLASP1Q7Z460 1538 aa24.47■■□□□ 1.51
LMAN1-202ENST00000587561 GRIN2AQ12879 1464 aa24.38■■□□□ 1.49
LMAN1-202ENST00000587561 FHAD1B1AJZ9 1412 aa24.38■■□□□ 1.49
LMAN1-202ENST00000587561 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
LMAN1-202ENST00000587561 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
LMAN1-202ENST00000587561 TRHP20396 242 aaPredicted RBP24.32■■□□□ 1.48
LMAN1-202ENST00000587561 NUP160Q12769 1436 aa24.29■■□□□ 1.48
LMAN1-202ENST00000587561 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
LMAN1-202ENST00000587561 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
LMAN1-202ENST00000587561 IGF1RP08069 1367 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms