RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 NISCHQ9Y2I1 1504 aa24.25■■□□□ 1.47
CLPTM1-207ENST00000587537 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
CLPTM1-207ENST00000587537 ABCC9O60706 1549 aa20.37■□□□□ 0.85
CLPTM1-207ENST00000587537 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
CLPTM1-207ENST00000587537 DCAF1Q9Y4B6 1507 aa20.21■□□□□ 0.83
CLPTM1-207ENST00000587537 MYO15BQ96JP2 1530 aa20.16■□□□□ 0.82
CLPTM1-207ENST00000587537 NACADO15069 1562 aa20.07■□□□□ 0.8
CLPTM1-207ENST00000587537 RB1CC1Q8TDY2 1594 aa19.96■□□□□ 0.79
CLPTM1-207ENST00000587537 DCAF8L2P0C7V8 631 aa19.93■□□□□ 0.78
CLPTM1-207ENST00000587537 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
CLPTM1-207ENST00000587537 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
CLPTM1-207ENST00000587537 SHROOM4Q9ULL8 1493 aa19.3■□□□□ 0.68
CLPTM1-207ENST00000587537 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
CLPTM1-207ENST00000587537 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
CLPTM1-207ENST00000587537 PABPN1Q86U42 306 aaKnown RBP eCLIP19.04■□□□□ 0.64
CLPTM1-207ENST00000587537 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
CLPTM1-207ENST00000587537 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
CLPTM1-207ENST00000587537 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
CLPTM1-207ENST00000587537 CECR2Q9BXF3 1484 aa18.72■□□□□ 0.59
CLPTM1-207ENST00000587537 MROH2BQ7Z745 1585 aa18.63■□□□□ 0.57
CLPTM1-207ENST00000587537 PEG3Q9GZU2 1588 aa18.6■□□□□ 0.57
CLPTM1-207ENST00000587537 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
CLPTM1-207ENST00000587537 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
CLPTM1-207ENST00000587537 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
CLPTM1-207ENST00000587537 CHIC1Q5VXU3 224 aa18.49■□□□□ 0.55
CLPTM1-207ENST00000587537 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
CLPTM1-207ENST00000587537 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
CLPTM1-207ENST00000587537 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
CLPTM1-207ENST00000587537 WIZO95785 1651 aa18.44■□□□□ 0.54
CLPTM1-207ENST00000587537 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.54
CLPTM1-207ENST00000587537 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
CLPTM1-207ENST00000587537 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
CLPTM1-207ENST00000587537 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
CLPTM1-207ENST00000587537 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.49
CLPTM1-207ENST00000587537 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
CLPTM1-207ENST00000587537 CFTRP13569 1480 aa17.93■□□□□ 0.46
CLPTM1-207ENST00000587537 CADPSQ9ULU8 1353 aa17.92■□□□□ 0.46
CLPTM1-207ENST00000587537 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
CLPTM1-207ENST00000587537 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
CLPTM1-207ENST00000587537 NESP48681 1621 aa17.73■□□□□ 0.43
CLPTM1-207ENST00000587537 FANCD2Q9BXW9 1451 aa17.7■□□□□ 0.42
CLPTM1-207ENST00000587537 CEP164Q9UPV0 1460 aa17.67■□□□□ 0.42
CLPTM1-207ENST00000587537 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
CLPTM1-207ENST00000587537 KIF21AQ7Z4S6 1674 aa17.61■□□□□ 0.41
CLPTM1-207ENST00000587537 ERCC6Q03468 1493 aa17.61■□□□□ 0.41
CLPTM1-207ENST00000587537 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
CLPTM1-207ENST00000587537 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
CLPTM1-207ENST00000587537 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
CLPTM1-207ENST00000587537 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
CLPTM1-207ENST00000587537 TOP2BQ02880 1626 aa17.5■□□□□ 0.39
CLPTM1-207ENST00000587537 WDR62O43379 1518 aa17.48■□□□□ 0.39
CLPTM1-207ENST00000587537 THOC2Q8NI27 1593 aaKnown RBP17.47■□□□□ 0.39
CLPTM1-207ENST00000587537 CUX1P39880 1505 aa17.47■□□□□ 0.39
CLPTM1-207ENST00000587537 TOPBP1Q92547 1522 aa17.47■□□□□ 0.39
CLPTM1-207ENST00000587537 URB2Q14146 1524 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-207ENST00000587537 SYNJ1O43426 1573 aa17.45■□□□□ 0.38
CLPTM1-207ENST00000587537 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
CLPTM1-207ENST00000587537 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
CLPTM1-207ENST00000587537 CUX2O14529 1486 aa17.34■□□□□ 0.37
CLPTM1-207ENST00000587537 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
CLPTM1-207ENST00000587537 WDR97A6NE52 1622 aa17.3■□□□□ 0.36
CLPTM1-207ENST00000587537 IFT140Q96RY7 1462 aa17.3■□□□□ 0.36
CLPTM1-207ENST00000587537 SOGA1O94964 1423 aa17.28■□□□□ 0.36
CLPTM1-207ENST00000587537 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
CLPTM1-207ENST00000587537 EEA1Q15075 1411 aa17.25■□□□□ 0.35
CLPTM1-207ENST00000587537 TARBP1Q13395 1621 aaKnown RBP17.25■□□□□ 0.35
CLPTM1-207ENST00000587537 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
CLPTM1-207ENST00000587537 RAD54L2Q9Y4B4 1467 aa17.18■□□□□ 0.34
CLPTM1-207ENST00000587537 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
CLPTM1-207ENST00000587537 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
CLPTM1-207ENST00000587537 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
CLPTM1-207ENST00000587537 EIF4G3O43432 1585 aaKnown RBP17.08■□□□□ 0.32
CLPTM1-207ENST00000587537 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
CLPTM1-207ENST00000587537 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
CLPTM1-207ENST00000587537 CUL7Q14999 1698 aa17.05■□□□□ 0.32
CLPTM1-207ENST00000587537 PBRM1Q86U86 1689 aa17.05■□□□□ 0.32
CLPTM1-207ENST00000587537 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
CLPTM1-207ENST00000587537 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.323e-8■■■■■ 43.2
CLPTM1-207ENST00000587537 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.32
CLPTM1-207ENST00000587537 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
CLPTM1-207ENST00000587537 IGF1RP08069 1367 aa17.01■□□□□ 0.31
CLPTM1-207ENST00000587537 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
CLPTM1-207ENST00000587537 KIF21BO75037 1637 aa16.97■□□□□ 0.31
CLPTM1-207ENST00000587537 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
CLPTM1-207ENST00000587537 PRXQ9BXM0 1461 aa16.95■□□□□ 0.3
CLPTM1-207ENST00000587537 ADAMTS12P58397 1594 aa16.94■□□□□ 0.3
CLPTM1-207ENST00000587537 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
CLPTM1-207ENST00000587537 RAPGEF2Q9Y4G8 1499 aa16.93■□□□□ 0.3
CLPTM1-207ENST00000587537 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
CLPTM1-207ENST00000587537 FAM9AQ8IZU1 332 aaPredicted RBP16.91■□□□□ 0.3
CLPTM1-207ENST00000587537 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
CLPTM1-207ENST00000587537 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
CLPTM1-207ENST00000587537 GRIN2AQ12879 1464 aa16.83■□□□□ 0.28
CLPTM1-207ENST00000587537 CHMP7Q8WUX9 453 aaPredicted RBP16.82■□□□□ 0.28
CLPTM1-207ENST00000587537 CHD1O14646 1710 aa16.77■□□□□ 0.28
CLPTM1-207ENST00000587537 TNIKQ9UKE5 1360 aa16.76■□□□□ 0.27
CLPTM1-207ENST00000587537 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
CLPTM1-207ENST00000587537 NUP160Q12769 1436 aa16.75■□□□□ 0.27
CLPTM1-207ENST00000587537 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
CLPTM1-207ENST00000587537 FBLN2P98095 1184 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms