RNA–Protein interactions for RNA: ENST00000587497.1

PTPN2-205, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-205ENST00000587497 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
PTPN2-205ENST00000587497 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
PTPN2-205ENST00000587497 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.53
PTPN2-205ENST00000587497 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
PTPN2-205ENST00000587497 ABCC9O60706 1549 aa16.93■□□□□ 0.3
PTPN2-205ENST00000587497 PHF23Q9BUL5 403 aaPredicted RBP16.65■□□□□ 0.26
PTPN2-205ENST00000587497 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
PTPN2-205ENST00000587497 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
PTPN2-205ENST00000587497 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
PTPN2-205ENST00000587497 NACADO15069 1562 aa15.76■□□□□ 0.11
PTPN2-205ENST00000587497 FOXD1Q16676 465 aa15.74■□□□□ 0.11
PTPN2-205ENST00000587497 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTPN2-205ENST00000587497 DCAF8L2P0C7V8 631 aa15.69■□□□□ 0.1
PTPN2-205ENST00000587497 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
PTPN2-205ENST00000587497 BICRAQ9NZM4 1560 aa15.5■□□□□ 0.07
PTPN2-205ENST00000587497 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
PTPN2-205ENST00000587497 CC2D2AQ9P2K1 1620 aa15.29■□□□□ 0.04
PTPN2-205ENST00000587497 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.03
PTPN2-205ENST00000587497 SHROOM4Q9ULL8 1493 aa15.2■□□□□ 0.02
PTPN2-205ENST00000587497 SCRIBQ14160 1630 aa15.17■□□□□ 0.02
PTPN2-205ENST00000587497 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
PTPN2-205ENST00000587497 ZCCHC6Q5VYS8 1495 aaKnown RBP15.12■□□□□ 0.01
PTPN2-205ENST00000587497 DCAF1Q9Y4B6 1507 aa15.09■□□□□ 0.01
PTPN2-205ENST00000587497 MSH5O43196 834 aa15.01□□□□□ -0.01
PTPN2-205ENST00000587497 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
PTPN2-205ENST00000587497 POTEDQ86YR6 584 aa14.93□□□□□ -0.02
PTPN2-205ENST00000587497 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
PTPN2-205ENST00000587497 PIAS4Q8N2W9 510 aaPredicted RBP14.71□□□□□ -0.05
PTPN2-205ENST00000587497 CUX2O14529 1486 aa14.68□□□□□ -0.06
PTPN2-205ENST00000587497 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
PTPN2-205ENST00000587497 NCAPD3P42695 1498 aa14.52□□□□□ -0.08
PTPN2-205ENST00000587497 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
PTPN2-205ENST00000587497 NESP48681 1621 aa14.45□□□□□ -0.1
PTPN2-205ENST00000587497 PPP6R1Q9UPN7 881 aa14.43□□□□□ -0.1
PTPN2-205ENST00000587497 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
PTPN2-205ENST00000587497 HMGXB3Q12766 1538 aa14.41□□□□□ -0.1
PTPN2-205ENST00000587497 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
PTPN2-205ENST00000587497 ADRA2BP18089 450 aa14.4□□□□□ -0.1
PTPN2-205ENST00000587497 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
PTPN2-205ENST00000587497 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
PTPN2-205ENST00000587497 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
PTPN2-205ENST00000587497 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
PTPN2-205ENST00000587497 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
PTPN2-205ENST00000587497 BAZ1AQ9NRL2 1556 aaPredicted RBP14.27□□□□□ -0.12
PTPN2-205ENST00000587497 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
PTPN2-205ENST00000587497 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
PTPN2-205ENST00000587497 MROH2BQ7Z745 1585 aa14.14□□□□□ -0.15
PTPN2-205ENST00000587497 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
PTPN2-205ENST00000587497 WDR62O43379 1518 aa14.08□□□□□ -0.16
PTPN2-205ENST00000587497 CADPSQ9ULU8 1353 aa14.08□□□□□ -0.16
PTPN2-205ENST00000587497 WIZO95785 1651 aa14.01□□□□□ -0.17
PTPN2-205ENST00000587497 CEP164Q9UPV0 1460 aa14□□□□□ -0.17
PTPN2-205ENST00000587497 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
PTPN2-205ENST00000587497 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
PTPN2-205ENST00000587497 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
PTPN2-205ENST00000587497 RIMBP3BA6NNM3 1639 aa13.87□□□□□ -0.19
PTPN2-205ENST00000587497 RIMBP3Q9UFD9 1639 aa13.87□□□□□ -0.19
PTPN2-205ENST00000587497 CFTRP13569 1480 aa13.85□□□□□ -0.19
PTPN2-205ENST00000587497 URB2Q14146 1524 aaKnown RBP13.85□□□□□ -0.19
PTPN2-205ENST00000587497 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
PTPN2-205ENST00000587497 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
PTPN2-205ENST00000587497 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
PTPN2-205ENST00000587497 ZNF608Q9ULD9 1512 aaPredicted RBP13.74□□□□□ -0.21
PTPN2-205ENST00000587497 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
PTPN2-205ENST00000587497 RSF1Q96T23 1441 aaPredicted RBP13.7□□□□□ -0.22
PTPN2-205ENST00000587497 CYB5RLQ6IPT4 315 aa13.69□□□□□ -0.22
PTPN2-205ENST00000587497 CHD1O14646 1710 aa13.69□□□□□ -0.22
PTPN2-205ENST00000587497 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
PTPN2-205ENST00000587497 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
PTPN2-205ENST00000587497 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
PTPN2-205ENST00000587497 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
PTPN2-205ENST00000587497 FBLN2P98095 1184 aa13.59□□□□□ -0.23
PTPN2-205ENST00000587497 ARAP1Q96P48 1450 aa13.59□□□□□ -0.23
PTPN2-205ENST00000587497 ABCC8Q09428 1581 aa13.58□□□□□ -0.23
PTPN2-205ENST00000587497 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.23
PTPN2-205ENST00000587497 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPN2-205ENST00000587497 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
PTPN2-205ENST00000587497 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
PTPN2-205ENST00000587497 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
PTPN2-205ENST00000587497 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
PTPN2-205ENST00000587497 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
PTPN2-205ENST00000587497 CLASP1Q7Z460 1538 aa13.44□□□□□ -0.26
PTPN2-205ENST00000587497 SNAPC4Q5SXM2 1469 aa13.43□□□□□ -0.26
PTPN2-205ENST00000587497 SYNJ1O43426 1573 aa13.43□□□□□ -0.26
PTPN2-205ENST00000587497 SOGA1O94964 1423 aa13.43□□□□□ -0.26
PTPN2-205ENST00000587497 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
PTPN2-205ENST00000587497 DMRT2Q9Y5R5 561 aa13.39□□□□□ -0.27
PTPN2-205ENST00000587497 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
PTPN2-205ENST00000587497 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
PTPN2-205ENST00000587497 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
PTPN2-205ENST00000587497 PBRM1Q86U86 1689 aa13.35□□□□□ -0.27
PTPN2-205ENST00000587497 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
PTPN2-205ENST00000587497 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
PTPN2-205ENST00000587497 GAPVD1Q14C86 1478 aa13.31□□□□□ -0.28
PTPN2-205ENST00000587497 CUX1P39880 1505 aa13.3□□□□□ -0.28
PTPN2-205ENST00000587497 MAPK8IP2Q13387 824 aaPredicted RBP13.27□□□□□ -0.29
PTPN2-205ENST00000587497 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
PTPN2-205ENST00000587497 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
PTPN2-205ENST00000587497 CEP170Q5SW79 1584 aa13.18□□□□□ -0.3
PTPN2-205ENST00000587497 ABCA10Q8WWZ4 1543 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms