RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 NISCHQ9Y2I1 1504 aa31.63■■■□□ 2.65
CNN1-205ENST00000586577 ABCC9O60706 1549 aa29.15■■■□□ 2.26
CNN1-205ENST00000586577 CCDC180Q9P1Z9 1646 aa28.61■■■□□ 2.17
CNN1-205ENST00000586577 DNAJC5BQ9UF47 199 aa27.83■■■□□ 2.05
CNN1-205ENST00000586577 RB1CC1Q8TDY2 1594 aa27.56■■■□□ 2
CNN1-205ENST00000586577 NACADO15069 1562 aa27.22■■□□□ 1.95
CNN1-205ENST00000586577 PABPN1Q86U42 306 aaKnown RBP eCLIP27.05■■□□□ 1.92
CNN1-205ENST00000586577 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
CNN1-205ENST00000586577 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
CNN1-205ENST00000586577 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
CNN1-205ENST00000586577 MYO15BQ96JP2 1530 aa26.63■■□□□ 1.85
CNN1-205ENST00000586577 SHROOM4Q9ULL8 1493 aa26.38■■□□□ 1.81
CNN1-205ENST00000586577 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
CNN1-205ENST00000586577 ZCCHC6Q5VYS8 1495 aaKnown RBP26.34■■□□□ 1.81
CNN1-205ENST00000586577 CC2D2AQ9P2K1 1620 aa26.32■■□□□ 1.8
CNN1-205ENST00000586577 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
CNN1-205ENST00000586577 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
CNN1-205ENST00000586577 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
CNN1-205ENST00000586577 SCRIBQ14160 1630 aa25.98■■□□□ 1.75
CNN1-205ENST00000586577 CUX2O14529 1486 aa25.47■■□□□ 1.67
CNN1-205ENST00000586577 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
CNN1-205ENST00000586577 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
CNN1-205ENST00000586577 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
CNN1-205ENST00000586577 SMARCA2P51531 1590 aa24.87■■□□□ 1.57
CNN1-205ENST00000586577 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
CNN1-205ENST00000586577 NESP48681 1621 aa24.83■■□□□ 1.57
CNN1-205ENST00000586577 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
CNN1-205ENST00000586577 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
CNN1-205ENST00000586577 TRIM41Q8WV44 630 aa24.73■■□□□ 1.55
CNN1-205ENST00000586577 BAZ1BQ9UIG0 1483 aaKnown RBP24.68■■□□□ 1.54
CNN1-205ENST00000586577 LAMC3Q9Y6N6 1575 aa24.66■■□□□ 1.54
CNN1-205ENST00000586577 PDS5BQ9NTI5 1447 aa24.58■■□□□ 1.53
CNN1-205ENST00000586577 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
CNN1-205ENST00000586577 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
CNN1-205ENST00000586577 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
CNN1-205ENST00000586577 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
CNN1-205ENST00000586577 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
CNN1-205ENST00000586577 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
CNN1-205ENST00000586577 WDR62O43379 1518 aa24.29■■□□□ 1.48
CNN1-205ENST00000586577 OSCARQ8IYS5 282 aa24.23■■□□□ 1.47
CNN1-205ENST00000586577 WIZO95785 1651 aa24.17■■□□□ 1.46
CNN1-205ENST00000586577 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.46
CNN1-205ENST00000586577 RSF1Q96T23 1441 aaPredicted RBP24.06■■□□□ 1.44
CNN1-205ENST00000586577 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
CNN1-205ENST00000586577 CFTRP13569 1480 aa23.89■■□□□ 1.42
CNN1-205ENST00000586577 RIMBP3CA6NJZ7 1639 aa23.89■■□□□ 1.42
CNN1-205ENST00000586577 RIMBP3BA6NNM3 1639 aa23.89■■□□□ 1.42
CNN1-205ENST00000586577 RIMBP3Q9UFD9 1639 aa23.89■■□□□ 1.42
CNN1-205ENST00000586577 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
CNN1-205ENST00000586577 URB2Q14146 1524 aaKnown RBP23.83■■□□□ 1.41
CNN1-205ENST00000586577 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
CNN1-205ENST00000586577 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
CNN1-205ENST00000586577 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
CNN1-205ENST00000586577 TRHP20396 242 aaPredicted RBP23.65■■□□□ 1.38
CNN1-205ENST00000586577 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
CNN1-205ENST00000586577 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
CNN1-205ENST00000586577 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
CNN1-205ENST00000586577 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
CNN1-205ENST00000586577 TOPBP1Q92547 1522 aa23.49■■□□□ 1.35
CNN1-205ENST00000586577 EIF4G3O43432 1585 aaKnown RBP23.49■■□□□ 1.35
CNN1-205ENST00000586577 AEBP2Q6ZN18 517 aaPredicted RBP23.48■■□□□ 1.35
CNN1-205ENST00000586577 ARAP1Q96P48 1450 aa23.46■■□□□ 1.35
CNN1-205ENST00000586577 CHD1O14646 1710 aa23.45■■□□□ 1.34
CNN1-205ENST00000586577 FBLN2P98095 1184 aa23.41■■□□□ 1.34
CNN1-205ENST00000586577 DNMBPQ6XZF7 1577 aa23.37■■□□□ 1.33
CNN1-205ENST00000586577 AQRO60306 1485 aaKnown RBP eCLIP23.36■■□□□ 1.33
CNN1-205ENST00000586577 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
CNN1-205ENST00000586577 TARBP1Q13395 1621 aaKnown RBP23.3■■□□□ 1.32
CNN1-205ENST00000586577 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
CNN1-205ENST00000586577 SYNJ1O43426 1573 aa23.16■■□□□ 1.3
CNN1-205ENST00000586577 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
CNN1-205ENST00000586577 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
CNN1-205ENST00000586577 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
CNN1-205ENST00000586577 SOGA1O94964 1423 aa23.13■■□□□ 1.29
CNN1-205ENST00000586577 TDRD9Q8NDG6 1382 aaKnown RBP23.13■■□□□ 1.29
CNN1-205ENST00000586577 SNAPC4Q5SXM2 1469 aa23.12■■□□□ 1.29
CNN1-205ENST00000586577 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
CNN1-205ENST00000586577 MAGI1Q96QZ7 1491 aaPredicted RBP23.08■■□□□ 1.29
CNN1-205ENST00000586577 GRIN2BQ13224 1484 aa23.01■■□□□ 1.27
CNN1-205ENST00000586577 SYNJ2O15056 1496 aa23■■□□□ 1.27
CNN1-205ENST00000586577 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
CNN1-205ENST00000586577 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
CNN1-205ENST00000586577 CUX1P39880 1505 aa22.91■■□□□ 1.26
CNN1-205ENST00000586577 PBRM1Q86U86 1689 aa22.84■■□□□ 1.25
CNN1-205ENST00000586577 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
CNN1-205ENST00000586577 ABCA5Q8WWZ7 1642 aa22.69■■□□□ 1.22
CNN1-205ENST00000586577 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
CNN1-205ENST00000586577 GRIN2AQ12879 1464 aa22.68■■□□□ 1.22
CNN1-205ENST00000586577 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
CNN1-205ENST00000586577 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
CNN1-205ENST00000586577 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
CNN1-205ENST00000586577 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
CNN1-205ENST00000586577 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
CNN1-205ENST00000586577 NUP160Q12769 1436 aa22.62■■□□□ 1.21
CNN1-205ENST00000586577 SHROOM2Q13796 1616 aa22.58■■□□□ 1.21
CNN1-205ENST00000586577 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
CNN1-205ENST00000586577 FHAD1B1AJZ9 1412 aa22.53■■□□□ 1.2
CNN1-205ENST00000586577 NPM1P06748 294 aaKnown RBP eCLIP22.52■■□□□ 1.2
CNN1-205ENST00000586577 FAM69CQ0P6D2 419 aa22.51■■□□□ 1.19
CNN1-205ENST00000586577 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms