RNA–Protein interactions for RNA: ENST00000586375.1

RAD23A-202, Transcript of RAD23 homolog A, nucleotide excision repair protein, humanhuman

TSL 3

Gene RAD23A, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23A-202ENST00000586375 NISCHQ9Y2I1 1504 aa38.79■■■■□ 3.8
RAD23A-202ENST00000586375 ABCC9O60706 1549 aa34.67■■■■□ 3.14
RAD23A-202ENST00000586375 CCDC180Q9P1Z9 1646 aa34.63■■■■□ 3.13
RAD23A-202ENST00000586375 AEBP2Q6ZN18 517 aaPredicted RBP34.34■■■■□ 3.09
RAD23A-202ENST00000586375 CHIC1Q5VXU3 224 aa33.58■■■□□ 2.97
RAD23A-202ENST00000586375 RB1CC1Q8TDY2 1594 aa32.85■■■□□ 2.85
RAD23A-202ENST00000586375 DCAF8L2P0C7V8 631 aa32.69■■■□□ 2.82
RAD23A-202ENST00000586375 NACADO15069 1562 aa32.64■■■□□ 2.82
RAD23A-202ENST00000586375 DNAJC5BQ9UF47 199 aa32.47■■■□□ 2.79
RAD23A-202ENST00000586375 UNC13AQ9UPW8 1703 aa32.39■■■□□ 2.78
RAD23A-202ENST00000586375 PABPN1Q86U42 306 aaKnown RBP eCLIP32.34■■■□□ 2.77
RAD23A-202ENST00000586375 ZCCHC6Q5VYS8 1495 aaKnown RBP32.21■■■□□ 2.75
RAD23A-202ENST00000586375 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
RAD23A-202ENST00000586375 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
RAD23A-202ENST00000586375 DCAF1Q9Y4B6 1507 aa31.88■■■□□ 2.69
RAD23A-202ENST00000586375 SCRIBQ14160 1630 aa31.81■■■□□ 2.68
RAD23A-202ENST00000586375 SHROOM4Q9ULL8 1493 aa31.29■■■□□ 2.6
RAD23A-202ENST00000586375 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
RAD23A-202ENST00000586375 EIF4G1Q04637 1599 aaKnown RBP31.22■■■□□ 2.59
RAD23A-202ENST00000586375 CECR2Q9BXF3 1484 aa31.09■■■□□ 2.57
RAD23A-202ENST00000586375 SMARCA4P51532 1647 aa30.25■■■□□ 2.43
RAD23A-202ENST00000586375 ATAD2BQ9ULI0 1458 aa30.2■■■□□ 2.43
RAD23A-202ENST00000586375 NCAPD3P42695 1498 aa30.17■■■□□ 2.42
RAD23A-202ENST00000586375 MROH2BQ7Z745 1585 aa30.03■■■□□ 2.4
RAD23A-202ENST00000586375 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
RAD23A-202ENST00000586375 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
RAD23A-202ENST00000586375 HMGXB3Q12766 1538 aa29.96■■■□□ 2.39
RAD23A-202ENST00000586375 NESP48681 1621 aa29.92■■■□□ 2.38
RAD23A-202ENST00000586375 BAZ1BQ9UIG0 1483 aaKnown RBP29.87■■■□□ 2.37
RAD23A-202ENST00000586375 PEG3Q9GZU2 1588 aa29.85■■■□□ 2.37
RAD23A-202ENST00000586375 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
RAD23A-202ENST00000586375 WIZO95785 1651 aa29.7■■■□□ 2.35
RAD23A-202ENST00000586375 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
RAD23A-202ENST00000586375 CUX2O14529 1486 aa29.55■■■□□ 2.32
RAD23A-202ENST00000586375 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
RAD23A-202ENST00000586375 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
RAD23A-202ENST00000586375 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
RAD23A-202ENST00000586375 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
RAD23A-202ENST00000586375 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
RAD23A-202ENST00000586375 CADPSQ9ULU8 1353 aa29.27■■■□□ 2.28
RAD23A-202ENST00000586375 PDS5BQ9NTI5 1447 aa29.2■■■□□ 2.27
RAD23A-202ENST00000586375 TOP2AP11388 1531 aaKnown RBP29.19■■■□□ 2.26
RAD23A-202ENST00000586375 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
RAD23A-202ENST00000586375 MRC2Q9UBG0 1479 aa29.07■■■□□ 2.24
RAD23A-202ENST00000586375 WDR62O43379 1518 aa29.02■■■□□ 2.24
RAD23A-202ENST00000586375 CFTRP13569 1480 aa29.01■■■□□ 2.23
RAD23A-202ENST00000586375 FANCD2Q9BXW9 1451 aa29.01■■■□□ 2.23
RAD23A-202ENST00000586375 CEP164Q9UPV0 1460 aa28.98■■■□□ 2.23
RAD23A-202ENST00000586375 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
RAD23A-202ENST00000586375 URB2Q14146 1524 aaKnown RBP28.87■■■□□ 2.21
RAD23A-202ENST00000586375 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
RAD23A-202ENST00000586375 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
RAD23A-202ENST00000586375 TOPBP1Q92547 1522 aa28.52■■■□□ 2.16
RAD23A-202ENST00000586375 DNMBPQ6XZF7 1577 aa28.38■■■□□ 2.13
RAD23A-202ENST00000586375 IFT140Q96RY7 1462 aa28.35■■■□□ 2.13
RAD23A-202ENST00000586375 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
RAD23A-202ENST00000586375 EIF4G3O43432 1585 aaKnown RBP28.32■■■□□ 2.12
RAD23A-202ENST00000586375 TARBP1Q13395 1621 aaKnown RBP28.29■■■□□ 2.12
RAD23A-202ENST00000586375 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
RAD23A-202ENST00000586375 POLA1P09884 1462 aaPredicted RBP28.25■■■□□ 2.11
RAD23A-202ENST00000586375 RAD54L2Q9Y4B4 1467 aa28.25■■■□□ 2.11
RAD23A-202ENST00000586375 AQRO60306 1485 aaKnown RBP eCLIP28.24■■■□□ 2.114e-8■■■■■ 39.2
RAD23A-202ENST00000586375 OSCARQ8IYS5 282 aa28.2■■■□□ 2.1
RAD23A-202ENST00000586375 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
RAD23A-202ENST00000586375 CUX1P39880 1505 aa28.18■■■□□ 2.1
RAD23A-202ENST00000586375 FGD5Q6ZNL6 1462 aa28.12■■■□□ 2.09
RAD23A-202ENST00000586375 CHD1O14646 1710 aa28.11■■■□□ 2.09
RAD23A-202ENST00000586375 TDRD9Q8NDG6 1382 aaKnown RBP28.07■■■□□ 2.08
RAD23A-202ENST00000586375 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
RAD23A-202ENST00000586375 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
RAD23A-202ENST00000586375 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
RAD23A-202ENST00000586375 SOGA1O94964 1423 aa28.04■■■□□ 2.08
RAD23A-202ENST00000586375 ARHGEF11O15085 1522 aa27.94■■■□□ 2.06
RAD23A-202ENST00000586375 WDR97A6NE52 1622 aa27.94■■■□□ 2.06
RAD23A-202ENST00000586375 SNAPC4Q5SXM2 1469 aa27.94■■■□□ 2.06
RAD23A-202ENST00000586375 FBLN2P98095 1184 aa27.92■■■□□ 2.06
RAD23A-202ENST00000586375 SYNJ1O43426 1573 aa27.8■■■□□ 2.04
RAD23A-202ENST00000586375 PBRM1Q86U86 1689 aa27.8■■■□□ 2.04
RAD23A-202ENST00000586375 ABCA5Q8WWZ7 1642 aa27.75■■■□□ 2.03
RAD23A-202ENST00000586375 GRIN2BQ13224 1484 aa27.75■■■□□ 2.03
RAD23A-202ENST00000586375 ARAP1Q96P48 1450 aa27.75■■■□□ 2.03
RAD23A-202ENST00000586375 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
RAD23A-202ENST00000586375 ABCA10Q8WWZ4 1543 aa27.72■■■□□ 2.03
RAD23A-202ENST00000586375 GAPVD1Q14C86 1478 aa27.71■■■□□ 2.03
RAD23A-202ENST00000586375 MAGI1Q96QZ7 1491 aaPredicted RBP27.7■■■□□ 2.02
RAD23A-202ENST00000586375 CYB5RLQ6IPT4 315 aa27.69■■■□□ 2.02
RAD23A-202ENST00000586375 BIVM-ERCC5R4GMW8 1640 aa27.69■■■□□ 2.02
RAD23A-202ENST00000586375 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
RAD23A-202ENST00000586375 SYNJ2O15056 1496 aa27.64■■■□□ 2.02
RAD23A-202ENST00000586375 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
RAD23A-202ENST00000586375 WRNQ14191 1432 aaPredicted RBP eCLIP27.64■■■□□ 2.02
RAD23A-202ENST00000586375 ADAMTS12P58397 1594 aa27.53■■■□□ 2
RAD23A-202ENST00000586375 ERCC6L2Q5T890 1561 aa27.51■■□□□ 1.99
RAD23A-202ENST00000586375 CEP170Q5SW79 1584 aa27.48■■□□□ 1.99
RAD23A-202ENST00000586375 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
RAD23A-202ENST00000586375 NUP160Q12769 1436 aa27.34■■□□□ 1.97
RAD23A-202ENST00000586375 FOXD1Q16676 465 aa27.32■■□□□ 1.96
RAD23A-202ENST00000586375 FHAD1B1AJZ9 1412 aa27.32■■□□□ 1.96
RAD23A-202ENST00000586375 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
RAD23A-202ENST00000586375 TRHP20396 242 aaPredicted RBP27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms