RNA–Protein interactions for RNA: ENST00000586292.5

ABCA8-207, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 5

Gene ABCA8, Length 875 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-207ENST00000586292 NISCHQ9Y2I1 1504 aa21.78■■□□□ 1.08
ABCA8-207ENST00000586292 ABCC9O60706 1549 aa19.89■□□□□ 0.77
ABCA8-207ENST00000586292 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
ABCA8-207ENST00000586292 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
ABCA8-207ENST00000586292 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
ABCA8-207ENST00000586292 NACADO15069 1562 aa18.77■□□□□ 0.6
ABCA8-207ENST00000586292 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
ABCA8-207ENST00000586292 PABPN1Q86U42 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
ABCA8-207ENST00000586292 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
ABCA8-207ENST00000586292 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
ABCA8-207ENST00000586292 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
ABCA8-207ENST00000586292 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
ABCA8-207ENST00000586292 DCAF1Q9Y4B6 1507 aa18.09■□□□□ 0.49
ABCA8-207ENST00000586292 CECR2Q9BXF3 1484 aa18.03■□□□□ 0.48
ABCA8-207ENST00000586292 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
ABCA8-207ENST00000586292 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
ABCA8-207ENST00000586292 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
ABCA8-207ENST00000586292 SCRIBQ14160 1630 aa17.8■□□□□ 0.44
ABCA8-207ENST00000586292 DNAJC5Q9H3Z4 198 aa17.78■□□□□ 0.44
ABCA8-207ENST00000586292 CUX2O14529 1486 aa17.46■□□□□ 0.39
ABCA8-207ENST00000586292 NCAPD3P42695 1498 aa17.32■□□□□ 0.36
ABCA8-207ENST00000586292 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
ABCA8-207ENST00000586292 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
ABCA8-207ENST00000586292 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
ABCA8-207ENST00000586292 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
ABCA8-207ENST00000586292 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
ABCA8-207ENST00000586292 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
ABCA8-207ENST00000586292 BAZ1BQ9UIG0 1483 aaKnown RBP16.98■□□□□ 0.31
ABCA8-207ENST00000586292 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
ABCA8-207ENST00000586292 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
ABCA8-207ENST00000586292 NESP48681 1621 aa16.96■□□□□ 0.31
ABCA8-207ENST00000586292 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
ABCA8-207ENST00000586292 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
ABCA8-207ENST00000586292 KIF21AQ7Z4S6 1674 aa16.77■□□□□ 0.28
ABCA8-207ENST00000586292 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
ABCA8-207ENST00000586292 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
ABCA8-207ENST00000586292 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
ABCA8-207ENST00000586292 MROH2BQ7Z745 1585 aa16.69■□□□□ 0.26
ABCA8-207ENST00000586292 WDR62O43379 1518 aa16.69■□□□□ 0.26
ABCA8-207ENST00000586292 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
ABCA8-207ENST00000586292 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
ABCA8-207ENST00000586292 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
ABCA8-207ENST00000586292 CFTRP13569 1480 aa16.49■□□□□ 0.23
ABCA8-207ENST00000586292 WIZO95785 1651 aa16.45■□□□□ 0.22
ABCA8-207ENST00000586292 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
ABCA8-207ENST00000586292 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
ABCA8-207ENST00000586292 IFT140Q96RY7 1462 aa16.3■□□□□ 0.2
ABCA8-207ENST00000586292 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
ABCA8-207ENST00000586292 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
ABCA8-207ENST00000586292 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
ABCA8-207ENST00000586292 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
ABCA8-207ENST00000586292 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
ABCA8-207ENST00000586292 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
ABCA8-207ENST00000586292 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
ABCA8-207ENST00000586292 ZNF608Q9ULD9 1512 aaPredicted RBP16.17■□□□□ 0.18
ABCA8-207ENST00000586292 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
ABCA8-207ENST00000586292 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
ABCA8-207ENST00000586292 EIF4G3O43432 1585 aaKnown RBP16.1■□□□□ 0.17
ABCA8-207ENST00000586292 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
ABCA8-207ENST00000586292 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
ABCA8-207ENST00000586292 TRHP20396 242 aaPredicted RBP16.05■□□□□ 0.16
ABCA8-207ENST00000586292 ARAP1Q96P48 1450 aa16.03■□□□□ 0.16
ABCA8-207ENST00000586292 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
ABCA8-207ENST00000586292 CHD1O14646 1710 aa16.02■□□□□ 0.16
ABCA8-207ENST00000586292 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
ABCA8-207ENST00000586292 AQRO60306 1485 aaKnown RBP eCLIP16■□□□□ 0.15
ABCA8-207ENST00000586292 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
ABCA8-207ENST00000586292 FBLN2P98095 1184 aa15.96■□□□□ 0.15
ABCA8-207ENST00000586292 SOGA1O94964 1423 aa15.91■□□□□ 0.14
ABCA8-207ENST00000586292 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
ABCA8-207ENST00000586292 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
ABCA8-207ENST00000586292 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
ABCA8-207ENST00000586292 AEBP2Q6ZN18 517 aaPredicted RBP15.88■□□□□ 0.13
ABCA8-207ENST00000586292 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
ABCA8-207ENST00000586292 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
ABCA8-207ENST00000586292 SNAPC4Q5SXM2 1469 aa15.85■□□□□ 0.13
ABCA8-207ENST00000586292 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
ABCA8-207ENST00000586292 RAD54L2Q9Y4B4 1467 aa15.84■□□□□ 0.13
ABCA8-207ENST00000586292 SYNJ2O15056 1496 aa15.83■□□□□ 0.12
ABCA8-207ENST00000586292 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
ABCA8-207ENST00000586292 GAPVD1Q14C86 1478 aa15.75■□□□□ 0.11
ABCA8-207ENST00000586292 CUX1P39880 1505 aa15.71■□□□□ 0.11
ABCA8-207ENST00000586292 PBRM1Q86U86 1689 aa15.68■□□□□ 0.1
ABCA8-207ENST00000586292 ABCA10Q8WWZ4 1543 aa15.68■□□□□ 0.1
ABCA8-207ENST00000586292 ABCA5Q8WWZ7 1642 aa15.63■□□□□ 0.09
ABCA8-207ENST00000586292 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
ABCA8-207ENST00000586292 NUP160Q12769 1436 aa15.6■□□□□ 0.09
ABCA8-207ENST00000586292 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
ABCA8-207ENST00000586292 CEP170Q5SW79 1584 aa15.56■□□□□ 0.08
ABCA8-207ENST00000586292 SHROOM2Q13796 1616 aa15.55■□□□□ 0.08
ABCA8-207ENST00000586292 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
ABCA8-207ENST00000586292 ADAMTS12P58397 1594 aa15.53■□□□□ 0.08
ABCA8-207ENST00000586292 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
ABCA8-207ENST00000586292 ERCC6L2Q5T890 1561 aa15.49■□□□□ 0.07
ABCA8-207ENST00000586292 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
ABCA8-207ENST00000586292 TOP2BQ02880 1626 aa15.44■□□□□ 0.06
ABCA8-207ENST00000586292 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
ABCA8-207ENST00000586292 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
ABCA8-207ENST00000586292 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
ABCA8-207ENST00000586292 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms