RNA–Protein interactions for RNA: ENST00000586005.5

SMIM22-201, Transcript of small integral membrane protein 22, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SMIM22, Length 366 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM22-201ENST00000586005 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
SMIM22-201ENST00000586005 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
SMIM22-201ENST00000586005 ABCC9O60706 1549 aa27■■□□□ 1.91
SMIM22-201ENST00000586005 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
SMIM22-201ENST00000586005 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
SMIM22-201ENST00000586005 NACADO15069 1562 aa25.64■■□□□ 1.69
SMIM22-201ENST00000586005 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
SMIM22-201ENST00000586005 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
SMIM22-201ENST00000586005 DNAJC5BQ9UF47 199 aa25.1■■□□□ 1.61
SMIM22-201ENST00000586005 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
SMIM22-201ENST00000586005 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
SMIM22-201ENST00000586005 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.58
SMIM22-201ENST00000586005 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
SMIM22-201ENST00000586005 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
SMIM22-201ENST00000586005 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
SMIM22-201ENST00000586005 CC2D2AQ9P2K1 1620 aa24.37■■□□□ 1.49
SMIM22-201ENST00000586005 CECR2Q9BXF3 1484 aa24.36■■□□□ 1.49
SMIM22-201ENST00000586005 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
SMIM22-201ENST00000586005 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
SMIM22-201ENST00000586005 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
SMIM22-201ENST00000586005 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
SMIM22-201ENST00000586005 SMARCA4P51532 1647 aa23.51■■□□□ 1.35
SMIM22-201ENST00000586005 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
SMIM22-201ENST00000586005 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
SMIM22-201ENST00000586005 HMGXB3Q12766 1538 aa23.45■■□□□ 1.34
SMIM22-201ENST00000586005 BAZ1BQ9UIG0 1483 aaKnown RBP23.4■■□□□ 1.34
SMIM22-201ENST00000586005 CUX2O14529 1486 aa23.32■■□□□ 1.32
SMIM22-201ENST00000586005 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
SMIM22-201ENST00000586005 DNAJC5Q9H3Z4 198 aa23.21■■□□□ 1.31
SMIM22-201ENST00000586005 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
SMIM22-201ENST00000586005 LAMC3Q9Y6N6 1575 aa23.13■■□□□ 1.29
SMIM22-201ENST00000586005 NESP48681 1621 aa23.11■■□□□ 1.29
SMIM22-201ENST00000586005 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.28
SMIM22-201ENST00000586005 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
SMIM22-201ENST00000586005 WIZO95785 1651 aa22.92■■□□□ 1.26
SMIM22-201ENST00000586005 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
SMIM22-201ENST00000586005 KIF21AQ7Z4S6 1674 aa22.87■■□□□ 1.25
SMIM22-201ENST00000586005 MRC2Q9UBG0 1479 aa22.77■■□□□ 1.24
SMIM22-201ENST00000586005 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
SMIM22-201ENST00000586005 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
SMIM22-201ENST00000586005 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
SMIM22-201ENST00000586005 FANCD2Q9BXW9 1451 aa22.67■■□□□ 1.22
SMIM22-201ENST00000586005 WDR62O43379 1518 aa22.64■■□□□ 1.21
SMIM22-201ENST00000586005 CFTRP13569 1480 aa22.64■■□□□ 1.21
SMIM22-201ENST00000586005 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
SMIM22-201ENST00000586005 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
SMIM22-201ENST00000586005 URB2Q14146 1524 aaKnown RBP22.37■■□□□ 1.17
SMIM22-201ENST00000586005 OSCARQ8IYS5 282 aa22.37■■□□□ 1.17
SMIM22-201ENST00000586005 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
SMIM22-201ENST00000586005 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
SMIM22-201ENST00000586005 IFT140Q96RY7 1462 aa22.28■■□□□ 1.16
SMIM22-201ENST00000586005 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
SMIM22-201ENST00000586005 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
SMIM22-201ENST00000586005 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
SMIM22-201ENST00000586005 FBLN2P98095 1184 aa22.02■■□□□ 1.12
SMIM22-201ENST00000586005 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
SMIM22-201ENST00000586005 SUPT5HO00267 1087 aaKnown RBP21.98■■□□□ 1.11
SMIM22-201ENST00000586005 SOGA1O94964 1423 aa21.97■■□□□ 1.11
SMIM22-201ENST00000586005 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
SMIM22-201ENST00000586005 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.11
SMIM22-201ENST00000586005 TARBP1Q13395 1621 aaKnown RBP21.95■■□□□ 1.1
SMIM22-201ENST00000586005 WDR97A6NE52 1622 aa21.89■■□□□ 1.09
SMIM22-201ENST00000586005 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
SMIM22-201ENST00000586005 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
SMIM22-201ENST00000586005 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
SMIM22-201ENST00000586005 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
SMIM22-201ENST00000586005 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
SMIM22-201ENST00000586005 RAD54L2Q9Y4B4 1467 aa21.86■■□□□ 1.09
SMIM22-201ENST00000586005 CHMP7Q8WUX9 453 aaPredicted RBP21.86■■□□□ 1.09
SMIM22-201ENST00000586005 CHD1O14646 1710 aa21.84■■□□□ 1.09
SMIM22-201ENST00000586005 ARHGEF11O15085 1522 aa21.84■■□□□ 1.09
SMIM22-201ENST00000586005 CYB5RLQ6IPT4 315 aa21.8■■□□□ 1.08
SMIM22-201ENST00000586005 CUX1P39880 1505 aa21.79■■□□□ 1.08
SMIM22-201ENST00000586005 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
SMIM22-201ENST00000586005 MAGI1Q96QZ7 1491 aaPredicted RBP21.77■■□□□ 1.07
SMIM22-201ENST00000586005 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
SMIM22-201ENST00000586005 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
SMIM22-201ENST00000586005 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
SMIM22-201ENST00000586005 SYNJ2O15056 1496 aa21.67■■□□□ 1.06
SMIM22-201ENST00000586005 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
SMIM22-201ENST00000586005 TRHP20396 242 aaPredicted RBP21.66■■□□□ 1.06
SMIM22-201ENST00000586005 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
SMIM22-201ENST00000586005 PBRM1Q86U86 1689 aa21.62■■□□□ 1.05
SMIM22-201ENST00000586005 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
SMIM22-201ENST00000586005 CLASP1Q7Z460 1538 aa21.55■■□□□ 1.04
SMIM22-201ENST00000586005 ABCA5Q8WWZ7 1642 aa21.53■■□□□ 1.04
SMIM22-201ENST00000586005 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
SMIM22-201ENST00000586005 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
SMIM22-201ENST00000586005 GRIN2AQ12879 1464 aa21.44■■□□□ 1.02
SMIM22-201ENST00000586005 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
SMIM22-201ENST00000586005 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
SMIM22-201ENST00000586005 ADAMTS12P58397 1594 aa21.38■■□□□ 1.01
SMIM22-201ENST00000586005 NUP160Q12769 1436 aa21.31■■□□□ 1
SMIM22-201ENST00000586005 CEP170Q5SW79 1584 aa21.27■□□□□ 0.99
SMIM22-201ENST00000586005 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
SMIM22-201ENST00000586005 NPM1P06748 294 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMIM22-201ENST00000586005 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
SMIM22-201ENST00000586005 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
SMIM22-201ENST00000586005 SHROOM2Q13796 1616 aa21.19■□□□□ 0.98
SMIM22-201ENST00000586005 CUL7Q14999 1698 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms