RNA–Protein interactions for RNA: ENST00000585230.1

SUPT6H-212, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 4

Gene SUPT6H, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-212ENST00000585230 NISCHQ9Y2I1 1504 aa28.56■■■□□ 2.16
SUPT6H-212ENST00000585230 ABCC9O60706 1549 aa26.25■■□□□ 1.79
SUPT6H-212ENST00000585230 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
SUPT6H-212ENST00000585230 DNAJC5BQ9UF47 199 aa24.92■■□□□ 1.58
SUPT6H-212ENST00000585230 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
SUPT6H-212ENST00000585230 DCAF8L2P0C7V8 631 aa24.51■■□□□ 1.51
SUPT6H-212ENST00000585230 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
SUPT6H-212ENST00000585230 NACADO15069 1562 aa24.42■■□□□ 1.5
SUPT6H-212ENST00000585230 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
SUPT6H-212ENST00000585230 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
SUPT6H-212ENST00000585230 MYO15BQ96JP2 1530 aa23.87■■□□□ 1.41
SUPT6H-212ENST00000585230 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
SUPT6H-212ENST00000585230 CC2D2AQ9P2K1 1620 aa23.61■■□□□ 1.37
SUPT6H-212ENST00000585230 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
SUPT6H-212ENST00000585230 SCRIBQ14160 1630 aa23.58■■□□□ 1.36
SUPT6H-212ENST00000585230 SHROOM4Q9ULL8 1493 aa23.53■■□□□ 1.36
SUPT6H-212ENST00000585230 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
SUPT6H-212ENST00000585230 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
SUPT6H-212ENST00000585230 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
SUPT6H-212ENST00000585230 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
SUPT6H-212ENST00000585230 CUX2O14529 1486 aa22.64■■□□□ 1.21
SUPT6H-212ENST00000585230 AEBP2Q6ZN18 517 aaPredicted RBP22.56■■□□□ 1.2
SUPT6H-212ENST00000585230 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
SUPT6H-212ENST00000585230 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
SUPT6H-212ENST00000585230 NESP48681 1621 aa22.44■■□□□ 1.18
SUPT6H-212ENST00000585230 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
SUPT6H-212ENST00000585230 SMARCA4P51532 1647 aa22.36■■□□□ 1.17
SUPT6H-212ENST00000585230 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
SUPT6H-212ENST00000585230 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
SUPT6H-212ENST00000585230 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
SUPT6H-212ENST00000585230 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
SUPT6H-212ENST00000585230 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
SUPT6H-212ENST00000585230 LAMC3Q9Y6N6 1575 aa22.1■■□□□ 1.13
SUPT6H-212ENST00000585230 KIF21AQ7Z4S6 1674 aa22.07■■□□□ 1.12
SUPT6H-212ENST00000585230 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
SUPT6H-212ENST00000585230 PEG3Q9GZU2 1588 aa22.05■■□□□ 1.12
SUPT6H-212ENST00000585230 PDS5BQ9NTI5 1447 aa22.04■■□□□ 1.12
SUPT6H-212ENST00000585230 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
SUPT6H-212ENST00000585230 MRC2Q9UBG0 1479 aa21.89■■□□□ 1.09
SUPT6H-212ENST00000585230 WDR62O43379 1518 aa21.8■■□□□ 1.08
SUPT6H-212ENST00000585230 WIZO95785 1651 aa21.78■■□□□ 1.08
SUPT6H-212ENST00000585230 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
SUPT6H-212ENST00000585230 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
SUPT6H-212ENST00000585230 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
SUPT6H-212ENST00000585230 CFTRP13569 1480 aa21.54■■□□□ 1.04
SUPT6H-212ENST00000585230 URB2Q14146 1524 aaKnown RBP21.53■■□□□ 1.04
SUPT6H-212ENST00000585230 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
SUPT6H-212ENST00000585230 TOP2AP11388 1531 aaKnown RBP21.45■■□□□ 1.02
SUPT6H-212ENST00000585230 RIMBP3CA6NJZ7 1639 aa21.37■■□□□ 1.01
SUPT6H-212ENST00000585230 RIMBP3BA6NNM3 1639 aa21.37■■□□□ 1.01
SUPT6H-212ENST00000585230 RIMBP3Q9UFD9 1639 aa21.37■■□□□ 1.01
SUPT6H-212ENST00000585230 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
SUPT6H-212ENST00000585230 IFT140Q96RY7 1462 aa21.29■■□□□ 1
SUPT6H-212ENST00000585230 ARHGEF11O15085 1522 aa21.27■■□□□ 1
SUPT6H-212ENST00000585230 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
SUPT6H-212ENST00000585230 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
SUPT6H-212ENST00000585230 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
SUPT6H-212ENST00000585230 CYB5RLQ6IPT4 315 aa21.22■□□□□ 0.99
SUPT6H-212ENST00000585230 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
SUPT6H-212ENST00000585230 TRHP20396 242 aaPredicted RBP21.16■□□□□ 0.98
SUPT6H-212ENST00000585230 FBLN2P98095 1184 aa21.16■□□□□ 0.98
SUPT6H-212ENST00000585230 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
SUPT6H-212ENST00000585230 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.977e-10■■■■□ 26.1
SUPT6H-212ENST00000585230 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
SUPT6H-212ENST00000585230 CHD1O14646 1710 aa21.09■□□□□ 0.97
SUPT6H-212ENST00000585230 ABCC8Q09428 1581 aa21.08■□□□□ 0.97
SUPT6H-212ENST00000585230 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
SUPT6H-212ENST00000585230 TARBP1Q13395 1621 aaKnown RBP21.01■□□□□ 0.95
SUPT6H-212ENST00000585230 POLA1P09884 1462 aaPredicted RBP20.98■□□□□ 0.95
SUPT6H-212ENST00000585230 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
SUPT6H-212ENST00000585230 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
SUPT6H-212ENST00000585230 SOGA1O94964 1423 aa20.91■□□□□ 0.94
SUPT6H-212ENST00000585230 SNAPC4Q5SXM2 1469 aa20.89■□□□□ 0.94
SUPT6H-212ENST00000585230 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
SUPT6H-212ENST00000585230 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
SUPT6H-212ENST00000585230 CLASP1Q7Z460 1538 aa20.79■□□□□ 0.92
SUPT6H-212ENST00000585230 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
SUPT6H-212ENST00000585230 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
SUPT6H-212ENST00000585230 CUX1P39880 1505 aa20.74■□□□□ 0.91
SUPT6H-212ENST00000585230 GRIN2BQ13224 1484 aa20.74■□□□□ 0.91
SUPT6H-212ENST00000585230 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
SUPT6H-212ENST00000585230 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
SUPT6H-212ENST00000585230 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
SUPT6H-212ENST00000585230 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
SUPT6H-212ENST00000585230 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
SUPT6H-212ENST00000585230 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
SUPT6H-212ENST00000585230 ABCA10Q8WWZ4 1543 aa20.51■□□□□ 0.87
SUPT6H-212ENST00000585230 GRIN2AQ12879 1464 aa20.48■□□□□ 0.87
SUPT6H-212ENST00000585230 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
SUPT6H-212ENST00000585230 CEP170Q5SW79 1584 aa20.42■□□□□ 0.86
SUPT6H-212ENST00000585230 ADAMTS12P58397 1594 aa20.42■□□□□ 0.86
SUPT6H-212ENST00000585230 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
SUPT6H-212ENST00000585230 NUP160Q12769 1436 aa20.38■□□□□ 0.85
SUPT6H-212ENST00000585230 FHAD1B1AJZ9 1412 aa20.35■□□□□ 0.85
SUPT6H-212ENST00000585230 SHROOM2Q13796 1616 aa20.3■□□□□ 0.84
SUPT6H-212ENST00000585230 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
SUPT6H-212ENST00000585230 TOP2BQ02880 1626 aa20.26■□□□□ 0.83
SUPT6H-212ENST00000585230 KIF13AQ9H1H9 1805 aa20.25■□□□□ 0.83
SUPT6H-212ENST00000585230 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
SUPT6H-212ENST00000585230 JPH4Q96JJ6 628 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms