RNA–Protein interactions for RNA: ENST00000584852.1

RHOT1-217, Transcript of ras homolog family member T1, humanhuman

TSL 5

Gene RHOT1, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-217ENST00000584852 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.19
RHOT1-217ENST00000584852 ABCC9O60706 1549 aa20.5■□□□□ 0.87
RHOT1-217ENST00000584852 CCDC180Q9P1Z9 1646 aa20.42■□□□□ 0.86
RHOT1-217ENST00000584852 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
RHOT1-217ENST00000584852 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
RHOT1-217ENST00000584852 NACADO15069 1562 aa19.28■□□□□ 0.68
RHOT1-217ENST00000584852 UNC13AQ9UPW8 1703 aa19.09■□□□□ 0.65
RHOT1-217ENST00000584852 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
RHOT1-217ENST00000584852 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
RHOT1-217ENST00000584852 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
RHOT1-217ENST00000584852 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
RHOT1-217ENST00000584852 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
RHOT1-217ENST00000584852 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
RHOT1-217ENST00000584852 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
RHOT1-217ENST00000584852 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
RHOT1-217ENST00000584852 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
RHOT1-217ENST00000584852 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
RHOT1-217ENST00000584852 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
RHOT1-217ENST00000584852 DNAJC5Q9H3Z4 198 aa17.97■□□□□ 0.47
RHOT1-217ENST00000584852 CUX2O14529 1486 aa17.84■□□□□ 0.45
RHOT1-217ENST00000584852 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
RHOT1-217ENST00000584852 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
RHOT1-217ENST00000584852 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
RHOT1-217ENST00000584852 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
RHOT1-217ENST00000584852 SMARCA4P51532 1647 aa17.66■□□□□ 0.42
RHOT1-217ENST00000584852 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
RHOT1-217ENST00000584852 NESP48681 1621 aa17.55■□□□□ 0.4
RHOT1-217ENST00000584852 THOC2Q8NI27 1593 aaKnown RBP17.54■□□□□ 0.4
RHOT1-217ENST00000584852 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
RHOT1-217ENST00000584852 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
RHOT1-217ENST00000584852 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
RHOT1-217ENST00000584852 LAMC3Q9Y6N6 1575 aa17.46■□□□□ 0.39
RHOT1-217ENST00000584852 KIF21AQ7Z4S6 1674 aa17.4■□□□□ 0.38
RHOT1-217ENST00000584852 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
RHOT1-217ENST00000584852 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
RHOT1-217ENST00000584852 WDR62O43379 1518 aa17.21■□□□□ 0.35
RHOT1-217ENST00000584852 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
RHOT1-217ENST00000584852 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
RHOT1-217ENST00000584852 WIZO95785 1651 aa17.12■□□□□ 0.33
RHOT1-217ENST00000584852 CEP164Q9UPV0 1460 aa17.08■□□□□ 0.32
RHOT1-217ENST00000584852 TRIM41Q8WV44 630 aa17.03■□□□□ 0.32
RHOT1-217ENST00000584852 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
RHOT1-217ENST00000584852 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
RHOT1-217ENST00000584852 CFTRP13569 1480 aa16.99■□□□□ 0.31
RHOT1-217ENST00000584852 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
RHOT1-217ENST00000584852 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
RHOT1-217ENST00000584852 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
RHOT1-217ENST00000584852 PRDM2Q13029 1718 aa16.9■□□□□ 0.3
RHOT1-217ENST00000584852 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
RHOT1-217ENST00000584852 RIMBP3CA6NJZ7 1639 aa16.79■□□□□ 0.28
RHOT1-217ENST00000584852 RIMBP3BA6NNM3 1639 aa16.79■□□□□ 0.28
RHOT1-217ENST00000584852 RIMBP3Q9UFD9 1639 aa16.79■□□□□ 0.28
RHOT1-217ENST00000584852 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
RHOT1-217ENST00000584852 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
RHOT1-217ENST00000584852 EIF4G3O43432 1585 aaKnown RBP16.7■□□□□ 0.26
RHOT1-217ENST00000584852 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
RHOT1-217ENST00000584852 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
RHOT1-217ENST00000584852 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
RHOT1-217ENST00000584852 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
RHOT1-217ENST00000584852 ABCC8Q09428 1581 aa16.61■□□□□ 0.25
RHOT1-217ENST00000584852 CHD1O14646 1710 aa16.61■□□□□ 0.25
RHOT1-217ENST00000584852 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
RHOT1-217ENST00000584852 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
RHOT1-217ENST00000584852 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
RHOT1-217ENST00000584852 AQRO60306 1485 aaKnown RBP eCLIP16.49■□□□□ 0.237e-7■■□□□ 14.1
RHOT1-217ENST00000584852 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
RHOT1-217ENST00000584852 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
RHOT1-217ENST00000584852 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
RHOT1-217ENST00000584852 RAD54L2Q9Y4B4 1467 aa16.4■□□□□ 0.22
RHOT1-217ENST00000584852 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
RHOT1-217ENST00000584852 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
RHOT1-217ENST00000584852 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
RHOT1-217ENST00000584852 SOGA1O94964 1423 aa16.35■□□□□ 0.21
RHOT1-217ENST00000584852 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
RHOT1-217ENST00000584852 FBLN2P98095 1184 aa16.33■□□□□ 0.2
RHOT1-217ENST00000584852 TDRD9Q8NDG6 1382 aaKnown RBP16.33■□□□□ 0.2
RHOT1-217ENST00000584852 CUX1P39880 1505 aa16.32■□□□□ 0.2
RHOT1-217ENST00000584852 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
RHOT1-217ENST00000584852 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
RHOT1-217ENST00000584852 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
RHOT1-217ENST00000584852 PBRM1Q86U86 1689 aa16.29■□□□□ 0.2
RHOT1-217ENST00000584852 SYNJ2O15056 1496 aa16.29■□□□□ 0.2
RHOT1-217ENST00000584852 ABCA5Q8WWZ7 1642 aa16.23■□□□□ 0.19
RHOT1-217ENST00000584852 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
RHOT1-217ENST00000584852 GAPVD1Q14C86 1478 aa16.19■□□□□ 0.18
RHOT1-217ENST00000584852 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
RHOT1-217ENST00000584852 ADAMTS12P58397 1594 aa16.12■□□□□ 0.17
RHOT1-217ENST00000584852 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
RHOT1-217ENST00000584852 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
RHOT1-217ENST00000584852 CEP170Q5SW79 1584 aa16.08■□□□□ 0.16
RHOT1-217ENST00000584852 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
RHOT1-217ENST00000584852 NUP160Q12769 1436 aa16.07■□□□□ 0.16
RHOT1-217ENST00000584852 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
RHOT1-217ENST00000584852 TOP2BQ02880 1626 aa16.01■□□□□ 0.15
RHOT1-217ENST00000584852 WRNQ14191 1432 aaPredicted RBP eCLIP16.01■□□□□ 0.15
RHOT1-217ENST00000584852 AEBP2Q6ZN18 517 aaPredicted RBP16■□□□□ 0.15
RHOT1-217ENST00000584852 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
RHOT1-217ENST00000584852 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
RHOT1-217ENST00000584852 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
RHOT1-217ENST00000584852 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms