RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
SRSF1-207ENST00000584668 ABCC9O60706 1549 aa19.64■□□□□ 0.73
SRSF1-207ENST00000584668 CCDC180Q9P1Z9 1646 aa19.54■□□□□ 0.72
SRSF1-207ENST00000584668 RB1CC1Q8TDY2 1594 aa18.71■□□□□ 0.59
SRSF1-207ENST00000584668 NACADO15069 1562 aa18.49■□□□□ 0.55
SRSF1-207ENST00000584668 DNAJC5BQ9UF47 199 aa18.48■□□□□ 0.55
SRSF1-207ENST00000584668 UNC13AQ9UPW8 1703 aa18.24■□□□□ 0.51
SRSF1-207ENST00000584668 DCAF8L2P0C7V8 631 aa18.2■□□□□ 0.5
SRSF1-207ENST00000584668 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRSF1-207ENST00000584668 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
SRSF1-207ENST00000584668 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
SRSF1-207ENST00000584668 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
SRSF1-207ENST00000584668 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
SRSF1-207ENST00000584668 CC2D2AQ9P2K1 1620 aa17.78■□□□□ 0.44
SRSF1-207ENST00000584668 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
SRSF1-207ENST00000584668 CECR2Q9BXF3 1484 aa17.76■□□□□ 0.43
SRSF1-207ENST00000584668 SCRIBQ14160 1630 aa17.69■□□□□ 0.42
SRSF1-207ENST00000584668 EIF4G1Q04637 1599 aaKnown RBP17.69■□□□□ 0.42
SRSF1-207ENST00000584668 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
SRSF1-207ENST00000584668 CUX2O14529 1486 aa17.16■□□□□ 0.34
SRSF1-207ENST00000584668 ERCC6Q03468 1493 aa17.09■□□□□ 0.33
SRSF1-207ENST00000584668 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
SRSF1-207ENST00000584668 SMARCA2P51531 1590 aa16.94■□□□□ 0.3
SRSF1-207ENST00000584668 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
SRSF1-207ENST00000584668 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
SRSF1-207ENST00000584668 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
SRSF1-207ENST00000584668 BAZ1BQ9UIG0 1483 aaKnown RBP16.79■□□□□ 0.28
SRSF1-207ENST00000584668 BAZ1AQ9NRL2 1556 aaPredicted RBP16.77■□□□□ 0.28
SRSF1-207ENST00000584668 NESP48681 1621 aa16.75■□□□□ 0.27
SRSF1-207ENST00000584668 THOC2Q8NI27 1593 aaKnown RBP16.75■□□□□ 0.27
SRSF1-207ENST00000584668 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
SRSF1-207ENST00000584668 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
SRSF1-207ENST00000584668 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
SRSF1-207ENST00000584668 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
SRSF1-207ENST00000584668 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
SRSF1-207ENST00000584668 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
SRSF1-207ENST00000584668 WDR62O43379 1518 aa16.47■□□□□ 0.23
SRSF1-207ENST00000584668 TRIM41Q8WV44 630 aa16.47■□□□□ 0.23
SRSF1-207ENST00000584668 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
SRSF1-207ENST00000584668 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
SRSF1-207ENST00000584668 WIZO95785 1651 aa16.34■□□□□ 0.21
SRSF1-207ENST00000584668 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
SRSF1-207ENST00000584668 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
SRSF1-207ENST00000584668 PRDM2Q13029 1718 aa16.22■□□□□ 0.19
SRSF1-207ENST00000584668 CFTRP13569 1480 aa16.22■□□□□ 0.19
SRSF1-207ENST00000584668 TOP2AP11388 1531 aaKnown RBP16.16■□□□□ 0.18
SRSF1-207ENST00000584668 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
SRSF1-207ENST00000584668 RIMBP3CA6NJZ7 1639 aa16.1■□□□□ 0.17
SRSF1-207ENST00000584668 RIMBP3BA6NNM3 1639 aa16.1■□□□□ 0.17
SRSF1-207ENST00000584668 RIMBP3Q9UFD9 1639 aa16.1■□□□□ 0.17
SRSF1-207ENST00000584668 IFT140Q96RY7 1462 aa16.06■□□□□ 0.16
SRSF1-207ENST00000584668 RSF1Q96T23 1441 aaPredicted RBP16.04■□□□□ 0.16
SRSF1-207ENST00000584668 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
SRSF1-207ENST00000584668 ABCC8Q09428 1581 aa16■□□□□ 0.15
SRSF1-207ENST00000584668 EIF4G3O43432 1585 aaKnown RBP15.98■□□□□ 0.15
SRSF1-207ENST00000584668 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
SRSF1-207ENST00000584668 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
SRSF1-207ENST00000584668 DNMBPQ6XZF7 1577 aa15.92■□□□□ 0.14
SRSF1-207ENST00000584668 CHD1O14646 1710 aa15.92■□□□□ 0.14
SRSF1-207ENST00000584668 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
SRSF1-207ENST00000584668 CYB5RLQ6IPT4 315 aa15.84■□□□□ 0.13
SRSF1-207ENST00000584668 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.12
SRSF1-207ENST00000584668 TRHP20396 242 aaPredicted RBP15.81■□□□□ 0.12
SRSF1-207ENST00000584668 WDR97A6NE52 1622 aa15.8■□□□□ 0.12
SRSF1-207ENST00000584668 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
SRSF1-207ENST00000584668 FBLN2P98095 1184 aa15.78■□□□□ 0.12
SRSF1-207ENST00000584668 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.123e-9■■■■■ 40
SRSF1-207ENST00000584668 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
SRSF1-207ENST00000584668 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
SRSF1-207ENST00000584668 SNAPC4Q5SXM2 1469 aa15.69■□□□□ 0.1
SRSF1-207ENST00000584668 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
SRSF1-207ENST00000584668 CLASP1Q7Z460 1538 aa15.68■□□□□ 0.1
SRSF1-207ENST00000584668 SOGA1O94964 1423 aa15.68■□□□□ 0.1
SRSF1-207ENST00000584668 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
SRSF1-207ENST00000584668 CHMP7Q8WUX9 453 aaPredicted RBP15.64■□□□□ 0.09
SRSF1-207ENST00000584668 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
SRSF1-207ENST00000584668 FGD5Q6ZNL6 1462 aa15.63■□□□□ 0.09
SRSF1-207ENST00000584668 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
SRSF1-207ENST00000584668 GRIN2BQ13224 1484 aa15.62■□□□□ 0.09
SRSF1-207ENST00000584668 PBRM1Q86U86 1689 aa15.61■□□□□ 0.09
SRSF1-207ENST00000584668 SYNJ2O15056 1496 aa15.61■□□□□ 0.09
SRSF1-207ENST00000584668 CUX1P39880 1505 aa15.54■□□□□ 0.08
SRSF1-207ENST00000584668 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.08
SRSF1-207ENST00000584668 ABCA5Q8WWZ7 1642 aa15.48■□□□□ 0.07
SRSF1-207ENST00000584668 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
SRSF1-207ENST00000584668 GRIN2AQ12879 1464 aa15.41■□□□□ 0.06
SRSF1-207ENST00000584668 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
SRSF1-207ENST00000584668 CEP170Q5SW79 1584 aa15.36■□□□□ 0.05
SRSF1-207ENST00000584668 SHROOM2Q13796 1616 aa15.35■□□□□ 0.05
SRSF1-207ENST00000584668 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
SRSF1-207ENST00000584668 NUP160Q12769 1436 aa15.34■□□□□ 0.05
SRSF1-207ENST00000584668 ERCC6L2Q5T890 1561 aa15.32■□□□□ 0.04
SRSF1-207ENST00000584668 FHAD1B1AJZ9 1412 aa15.31■□□□□ 0.04
SRSF1-207ENST00000584668 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
SRSF1-207ENST00000584668 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
SRSF1-207ENST00000584668 ERICH3Q5RHP9 1530 aa15.3■□□□□ 0.04
SRSF1-207ENST00000584668 TOP2BQ02880 1626 aa15.29■□□□□ 0.04
SRSF1-207ENST00000584668 PRG4Q92954 1404 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-207ENST00000584668 NPM1P06748 294 aaKnown RBP eCLIP15.2■□□□□ 0.02
SRSF1-207ENST00000584668 RUSC2Q8N2Y8 1516 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms