RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-208ENST00000584052 NISCHQ9Y2I1 1504 aa37.43■■■■□ 3.58
RIOK3-208ENST00000584052 ABCC9O60706 1549 aa33.75■■■□□ 2.99
RIOK3-208ENST00000584052 CCDC180Q9P1Z9 1646 aa33.48■■■□□ 2.95
RIOK3-208ENST00000584052 DCAF8L2P0C7V8 631 aa32.07■■■□□ 2.72
RIOK3-208ENST00000584052 RB1CC1Q8TDY2 1594 aa32.02■■■□□ 2.72
RIOK3-208ENST00000584052 NACADO15069 1562 aa31.77■■■□□ 2.68
RIOK3-208ENST00000584052 DNAJC5BQ9UF47 199 aa31.7■■■□□ 2.67
RIOK3-208ENST00000584052 PABPN1Q86U42 306 aaKnown RBP eCLIP31.55■■■□□ 2.64
RIOK3-208ENST00000584052 MYO15BQ96JP2 1530 aa31.24■■■□□ 2.59
RIOK3-208ENST00000584052 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
RIOK3-208ENST00000584052 BICRAQ9NZM4 1560 aa30.97■■■□□ 2.55
RIOK3-208ENST00000584052 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
RIOK3-208ENST00000584052 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
RIOK3-208ENST00000584052 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
RIOK3-208ENST00000584052 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
RIOK3-208ENST00000584052 CECR2Q9BXF3 1484 aa30.39■■■□□ 2.46
RIOK3-208ENST00000584052 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
RIOK3-208ENST00000584052 EIF4G1Q04637 1599 aaKnown RBP30.29■■■□□ 2.44
RIOK3-208ENST00000584052 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
RIOK3-208ENST00000584052 ATAD2BQ9ULI0 1458 aa29.26■■■□□ 2.27
RIOK3-208ENST00000584052 ERCC6Q03468 1493 aa29.23■■■□□ 2.27
RIOK3-208ENST00000584052 DNAJC5Q9H3Z4 198 aa29.2■■■□□ 2.26
RIOK3-208ENST00000584052 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
RIOK3-208ENST00000584052 SMARCA4P51532 1647 aa29.16■■■□□ 2.26
RIOK3-208ENST00000584052 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
RIOK3-208ENST00000584052 HMGXB3Q12766 1538 aa29.05■■■□□ 2.24
RIOK3-208ENST00000584052 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
RIOK3-208ENST00000584052 CUX2O14529 1486 aa29.03■■■□□ 2.24
RIOK3-208ENST00000584052 NESP48681 1621 aa28.93■■■□□ 2.22
RIOK3-208ENST00000584052 MROH2BQ7Z745 1585 aa28.84■■■□□ 2.21
RIOK3-208ENST00000584052 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
RIOK3-208ENST00000584052 LAMC3Q9Y6N6 1575 aa28.67■■■□□ 2.18
RIOK3-208ENST00000584052 PDS5BQ9NTI5 1447 aa28.65■■■□□ 2.18
RIOK3-208ENST00000584052 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
RIOK3-208ENST00000584052 WIZO95785 1651 aa28.49■■■□□ 2.15
RIOK3-208ENST00000584052 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
RIOK3-208ENST00000584052 KIF21AQ7Z4S6 1674 aa28.45■■■□□ 2.15
RIOK3-208ENST00000584052 MRC2Q9UBG0 1479 aa28.32■■■□□ 2.12
RIOK3-208ENST00000584052 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
RIOK3-208ENST00000584052 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
RIOK3-208ENST00000584052 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
RIOK3-208ENST00000584052 WDR62O43379 1518 aa28.16■■■□□ 2.1
RIOK3-208ENST00000584052 CFTRP13569 1480 aa28.13■■■□□ 2.09
RIOK3-208ENST00000584052 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
RIOK3-208ENST00000584052 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
RIOK3-208ENST00000584052 OSCARQ8IYS5 282 aa27.93■■■□□ 2.06
RIOK3-208ENST00000584052 URB2Q14146 1524 aaKnown RBP27.89■■■□□ 2.06
RIOK3-208ENST00000584052 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
RIOK3-208ENST00000584052 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
RIOK3-208ENST00000584052 IFT140Q96RY7 1462 aa27.65■■■□□ 2.02
RIOK3-208ENST00000584052 ABCC8Q09428 1581 aa27.62■■■□□ 2.01
RIOK3-208ENST00000584052 TOPBP1Q92547 1522 aa27.61■■■□□ 2.01
RIOK3-208ENST00000584052 ZNF608Q9ULD9 1512 aaPredicted RBP27.59■■■□□ 2.01
RIOK3-208ENST00000584052 FBLN2P98095 1184 aa27.48■■□□□ 1.99
RIOK3-208ENST00000584052 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
RIOK3-208ENST00000584052 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.98
RIOK3-208ENST00000584052 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
RIOK3-208ENST00000584052 SOGA1O94964 1423 aa27.33■■□□□ 1.97
RIOK3-208ENST00000584052 POLA1P09884 1462 aaPredicted RBP27.32■■□□□ 1.96
RIOK3-208ENST00000584052 SUPT5HO00267 1087 aaKnown RBP27.32■■□□□ 1.96
RIOK3-208ENST00000584052 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
RIOK3-208ENST00000584052 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
RIOK3-208ENST00000584052 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
RIOK3-208ENST00000584052 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
RIOK3-208ENST00000584052 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
RIOK3-208ENST00000584052 TARBP1Q13395 1621 aaKnown RBP27.28■■□□□ 1.96
RIOK3-208ENST00000584052 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
RIOK3-208ENST00000584052 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
RIOK3-208ENST00000584052 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
RIOK3-208ENST00000584052 FGD5Q6ZNL6 1462 aa27.17■■□□□ 1.94
RIOK3-208ENST00000584052 CHD1O14646 1710 aa27.16■■□□□ 1.94
RIOK3-208ENST00000584052 TRHP20396 242 aaPredicted RBP27.12■■□□□ 1.93
RIOK3-208ENST00000584052 CUX1P39880 1505 aa27.09■■□□□ 1.93
RIOK3-208ENST00000584052 SNAPC4Q5SXM2 1469 aa27.07■■□□□ 1.92
RIOK3-208ENST00000584052 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
RIOK3-208ENST00000584052 WDR97A6NE52 1622 aa26.99■■□□□ 1.91
RIOK3-208ENST00000584052 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
RIOK3-208ENST00000584052 ARAP1Q96P48 1450 aa26.96■■□□□ 1.91
RIOK3-208ENST00000584052 GAPVD1Q14C86 1478 aa26.94■■□□□ 1.9
RIOK3-208ENST00000584052 SYNJ1O43426 1573 aa26.92■■□□□ 1.9
RIOK3-208ENST00000584052 SYNJ2O15056 1496 aa26.92■■□□□ 1.9
RIOK3-208ENST00000584052 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
RIOK3-208ENST00000584052 CLASP1Q7Z460 1538 aa26.82■■□□□ 1.88
RIOK3-208ENST00000584052 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
RIOK3-208ENST00000584052 PBRM1Q86U86 1689 aa26.78■■□□□ 1.88
RIOK3-208ENST00000584052 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
RIOK3-208ENST00000584052 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
RIOK3-208ENST00000584052 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
RIOK3-208ENST00000584052 FHAD1B1AJZ9 1412 aa26.59■■□□□ 1.85
RIOK3-208ENST00000584052 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
RIOK3-208ENST00000584052 ADAMTS12P58397 1594 aa26.52■■□□□ 1.84
RIOK3-208ENST00000584052 NUP160Q12769 1436 aa26.5■■□□□ 1.83
RIOK3-208ENST00000584052 ERICH3Q5RHP9 1530 aa26.49■■□□□ 1.83
RIOK3-208ENST00000584052 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
RIOK3-208ENST00000584052 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
RIOK3-208ENST00000584052 ERCC6L2Q5T890 1561 aa26.45■■□□□ 1.82
RIOK3-208ENST00000584052 PRG4Q92954 1404 aaPredicted RBP26.39■■□□□ 1.82
RIOK3-208ENST00000584052 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
RIOK3-208ENST00000584052 NPM1P06748 294 aaKnown RBP eCLIP26.36■■□□□ 1.81
RIOK3-208ENST00000584052 SHROOM2Q13796 1616 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms