RNA–Protein interactions for RNA: ENST00000583972.1

SUPT6H-209, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 2

Gene SUPT6H, Length 1,969 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-209ENST00000583972 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
SUPT6H-209ENST00000583972 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
SUPT6H-209ENST00000583972 ABCC9O60706 1549 aa24.76■■□□□ 1.55
SUPT6H-209ENST00000583972 RB1CC1Q8TDY2 1594 aa23.64■■□□□ 1.38
SUPT6H-209ENST00000583972 NACADO15069 1562 aa23.52■■□□□ 1.36
SUPT6H-209ENST00000583972 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
SUPT6H-209ENST00000583972 MYO15BQ96JP2 1530 aa23.25■■□□□ 1.31
SUPT6H-209ENST00000583972 UNC13AQ9UPW8 1703 aa23.19■■□□□ 1.3
SUPT6H-209ENST00000583972 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
SUPT6H-209ENST00000583972 PABPN1Q86U42 306 aaKnown RBP eCLIP23.04■■□□□ 1.28
SUPT6H-209ENST00000583972 DNAJC5BQ9UF47 199 aa23.03■■□□□ 1.28
SUPT6H-209ENST00000583972 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
SUPT6H-209ENST00000583972 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
SUPT6H-209ENST00000583972 SCRIBQ14160 1630 aa22.77■■□□□ 1.24
SUPT6H-209ENST00000583972 SHROOM4Q9ULL8 1493 aa22.66■■□□□ 1.22
SUPT6H-209ENST00000583972 EIF4G1Q04637 1599 aaKnown RBP22.4■■□□□ 1.18
SUPT6H-209ENST00000583972 CC2D2AQ9P2K1 1620 aa22.4■■□□□ 1.18
SUPT6H-209ENST00000583972 CECR2Q9BXF3 1484 aa22.28■■□□□ 1.16
SUPT6H-209ENST00000583972 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
SUPT6H-209ENST00000583972 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
SUPT6H-209ENST00000583972 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
SUPT6H-209ENST00000583972 BAZ1AQ9NRL2 1556 aaPredicted RBP21.62■■□□□ 1.05
SUPT6H-209ENST00000583972 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
SUPT6H-209ENST00000583972 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
SUPT6H-209ENST00000583972 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
SUPT6H-209ENST00000583972 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
SUPT6H-209ENST00000583972 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
SUPT6H-209ENST00000583972 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
SUPT6H-209ENST00000583972 NESP48681 1621 aa21.34■■□□□ 1.01
SUPT6H-209ENST00000583972 CUX2O14529 1486 aa21.26■□□□□ 0.99
SUPT6H-209ENST00000583972 WIZO95785 1651 aa21.26■□□□□ 0.99
SUPT6H-209ENST00000583972 LAMC3Q9Y6N6 1575 aa21.2■□□□□ 0.98
SUPT6H-209ENST00000583972 SUPT5HO00267 1087 aaKnown RBP21.17■□□□□ 0.98
SUPT6H-209ENST00000583972 THOC2Q8NI27 1593 aaKnown RBP21.13■□□□□ 0.97
SUPT6H-209ENST00000583972 KIF21AQ7Z4S6 1674 aa21.11■□□□□ 0.97
SUPT6H-209ENST00000583972 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.96
SUPT6H-209ENST00000583972 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
SUPT6H-209ENST00000583972 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
SUPT6H-209ENST00000583972 TOP2AP11388 1531 aaKnown RBP20.99■□□□□ 0.95
SUPT6H-209ENST00000583972 DNAJC5Q9H3Z4 198 aa20.98■□□□□ 0.95
SUPT6H-209ENST00000583972 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
SUPT6H-209ENST00000583972 WDR62O43379 1518 aa20.86■□□□□ 0.93
SUPT6H-209ENST00000583972 CFTRP13569 1480 aa20.85■□□□□ 0.93
SUPT6H-209ENST00000583972 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
SUPT6H-209ENST00000583972 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
SUPT6H-209ENST00000583972 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
SUPT6H-209ENST00000583972 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
SUPT6H-209ENST00000583972 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
SUPT6H-209ENST00000583972 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
SUPT6H-209ENST00000583972 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
SUPT6H-209ENST00000583972 DNMBPQ6XZF7 1577 aa20.41■□□□□ 0.86
SUPT6H-209ENST00000583972 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
SUPT6H-209ENST00000583972 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
SUPT6H-209ENST00000583972 ABCC8Q09428 1581 aa20.37■□□□□ 0.85
SUPT6H-209ENST00000583972 EIF4G3O43432 1585 aaKnown RBP20.31■□□□□ 0.84
SUPT6H-209ENST00000583972 TARBP1Q13395 1621 aaKnown RBP20.29■□□□□ 0.84
SUPT6H-209ENST00000583972 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
SUPT6H-209ENST00000583972 OSCARQ8IYS5 282 aa20.23■□□□□ 0.83
SUPT6H-209ENST00000583972 CUX1P39880 1505 aa20.19■□□□□ 0.82
SUPT6H-209ENST00000583972 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.828e-7■■■■□ 26.4
SUPT6H-209ENST00000583972 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
SUPT6H-209ENST00000583972 FGD5Q6ZNL6 1462 aa20.17■□□□□ 0.82
SUPT6H-209ENST00000583972 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
SUPT6H-209ENST00000583972 CHD1O14646 1710 aa20.13■□□□□ 0.81
SUPT6H-209ENST00000583972 SOGA1O94964 1423 aa20.12■□□□□ 0.81
SUPT6H-209ENST00000583972 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
SUPT6H-209ENST00000583972 RIMBP3CA6NJZ7 1639 aa20.07■□□□□ 0.8
SUPT6H-209ENST00000583972 RIMBP3BA6NNM3 1639 aa20.07■□□□□ 0.8
SUPT6H-209ENST00000583972 RIMBP3Q9UFD9 1639 aa20.07■□□□□ 0.8
SUPT6H-209ENST00000583972 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
SUPT6H-209ENST00000583972 ARHGEF11O15085 1522 aa20.02■□□□□ 0.8
SUPT6H-209ENST00000583972 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.79
SUPT6H-209ENST00000583972 PBRM1Q86U86 1689 aa19.96■□□□□ 0.79
SUPT6H-209ENST00000583972 FBLN2P98095 1184 aa19.95■□□□□ 0.78
SUPT6H-209ENST00000583972 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
SUPT6H-209ENST00000583972 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
SUPT6H-209ENST00000583972 ABCA5Q8WWZ7 1642 aa19.94■□□□□ 0.78
SUPT6H-209ENST00000583972 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
SUPT6H-209ENST00000583972 LOC105371045A0A1W2PR82 267 aa19.93■□□□□ 0.78
SUPT6H-209ENST00000583972 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
SUPT6H-209ENST00000583972 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
SUPT6H-209ENST00000583972 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
SUPT6H-209ENST00000583972 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
SUPT6H-209ENST00000583972 CLASP1Q7Z460 1538 aa19.88■□□□□ 0.77
SUPT6H-209ENST00000583972 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
SUPT6H-209ENST00000583972 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
SUPT6H-209ENST00000583972 HRCP23327 699 aa19.86■□□□□ 0.77
SUPT6H-209ENST00000583972 PCGF6Q9BYE7 350 aa19.84■□□□□ 0.77
SUPT6H-209ENST00000583972 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
SUPT6H-209ENST00000583972 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
SUPT6H-209ENST00000583972 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
SUPT6H-209ENST00000583972 CYB5RLQ6IPT4 315 aa19.77■□□□□ 0.75
SUPT6H-209ENST00000583972 GRIN2AQ12879 1464 aa19.72■□□□□ 0.75
SUPT6H-209ENST00000583972 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
SUPT6H-209ENST00000583972 CEP170Q5SW79 1584 aa19.68■□□□□ 0.74
SUPT6H-209ENST00000583972 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
SUPT6H-209ENST00000583972 NUP160Q12769 1436 aa19.64■□□□□ 0.74
SUPT6H-209ENST00000583972 ERCC6L2Q5T890 1561 aa19.6■□□□□ 0.73
SUPT6H-209ENST00000583972 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
SUPT6H-209ENST00000583972 SHROOM2Q13796 1616 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms