RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 NISCHQ9Y2I1 1504 aa42.35■■■■■ 4.37
NDEL1-217ENST00000583683 CCDC180Q9P1Z9 1646 aa37.21■■■■□ 3.55
NDEL1-217ENST00000583683 ABCC9O60706 1549 aa35.55■■■■□ 3.28
NDEL1-217ENST00000583683 ZCCHC6Q5VYS8 1495 aaKnown RBP35.47■■■■□ 3.27
NDEL1-217ENST00000583683 DCAF1Q9Y4B6 1507 aa35.04■■■■□ 3.2
NDEL1-217ENST00000583683 DCAF8L2P0C7V8 631 aa35.02■■■■□ 3.2
NDEL1-217ENST00000583683 MYO15BQ96JP2 1530 aa34.83■■■■□ 3.17
NDEL1-217ENST00000583683 NACADO15069 1562 aa34.75■■■■□ 3.15
NDEL1-217ENST00000583683 RB1CC1Q8TDY2 1594 aa34.56■■■■□ 3.12
NDEL1-217ENST00000583683 SHROOM4Q9ULL8 1493 aa34.09■■■■□ 3.05
NDEL1-217ENST00000583683 SCRIBQ14160 1630 aa34.08■■■■□ 3.05
NDEL1-217ENST00000583683 UNC13AQ9UPW8 1703 aa33.91■■■■□ 3.02
NDEL1-217ENST00000583683 BICRAQ9NZM4 1560 aa33.54■■■□□ 2.96
NDEL1-217ENST00000583683 PABPN1Q86U42 306 aaKnown RBP eCLIP33.39■■■□□ 2.94
NDEL1-217ENST00000583683 CECR2Q9BXF3 1484 aa32.92■■■□□ 2.86
NDEL1-217ENST00000583683 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
NDEL1-217ENST00000583683 MROH2BQ7Z745 1585 aa32.68■■■□□ 2.82
NDEL1-217ENST00000583683 SMARCA4P51532 1647 aa32.67■■■□□ 2.82
NDEL1-217ENST00000583683 RSF1Q96T23 1441 aaPredicted RBP32.64■■■□□ 2.82
NDEL1-217ENST00000583683 EIF4G1Q04637 1599 aaKnown RBP32.56■■■□□ 2.8
NDEL1-217ENST00000583683 SUPT5HO00267 1087 aaKnown RBP32.54■■■□□ 2.8
NDEL1-217ENST00000583683 WIZO95785 1651 aa32.41■■■□□ 2.78
NDEL1-217ENST00000583683 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
NDEL1-217ENST00000583683 ATAD2BQ9ULI0 1458 aa32.24■■■□□ 2.75
NDEL1-217ENST00000583683 SMARCA2P51531 1590 aa32.22■■■□□ 2.75
NDEL1-217ENST00000583683 CC2D2AQ9P2K1 1620 aa32.2■■■□□ 2.75
NDEL1-217ENST00000583683 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
NDEL1-217ENST00000583683 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
NDEL1-217ENST00000583683 BAZ1BQ9UIG0 1483 aaKnown RBP32.02■■■□□ 2.72
NDEL1-217ENST00000583683 HMGXB3Q12766 1538 aa31.99■■■□□ 2.71
NDEL1-217ENST00000583683 DNAJC5BQ9UF47 199 aa31.81■■■□□ 2.68
NDEL1-217ENST00000583683 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
NDEL1-217ENST00000583683 CFTRP13569 1480 aa31.21■■■□□ 2.59
NDEL1-217ENST00000583683 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
NDEL1-217ENST00000583683 PRDM2Q13029 1718 aa31.08■■■□□ 2.57
NDEL1-217ENST00000583683 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
NDEL1-217ENST00000583683 NESP48681 1621 aa31.07■■■□□ 2.56
NDEL1-217ENST00000583683 CHIC1Q5VXU3 224 aa30.91■■■□□ 2.54
NDEL1-217ENST00000583683 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
NDEL1-217ENST00000583683 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
NDEL1-217ENST00000583683 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
NDEL1-217ENST00000583683 KIF21AQ7Z4S6 1674 aa30.74■■■□□ 2.51
NDEL1-217ENST00000583683 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
NDEL1-217ENST00000583683 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.5
NDEL1-217ENST00000583683 TRIM41Q8WV44 630 aa30.66■■■□□ 2.5
NDEL1-217ENST00000583683 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
NDEL1-217ENST00000583683 CUX1P39880 1505 aa30.6■■■□□ 2.49
NDEL1-217ENST00000583683 TOP2BQ02880 1626 aa30.57■■■□□ 2.48
NDEL1-217ENST00000583683 BIVM-ERCC5R4GMW8 1640 aa30.57■■■□□ 2.48
NDEL1-217ENST00000583683 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
NDEL1-217ENST00000583683 URB2Q14146 1524 aaKnown RBP30.49■■■□□ 2.47
NDEL1-217ENST00000583683 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
NDEL1-217ENST00000583683 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
NDEL1-217ENST00000583683 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
NDEL1-217ENST00000583683 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
NDEL1-217ENST00000583683 FGD5Q6ZNL6 1462 aa30.33■■■□□ 2.45
NDEL1-217ENST00000583683 WDR62O43379 1518 aa30.33■■■□□ 2.45
NDEL1-217ENST00000583683 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
NDEL1-217ENST00000583683 SOGA1O94964 1423 aa30.17■■■□□ 2.42
NDEL1-217ENST00000583683 RAD54L2Q9Y4B4 1467 aa30.15■■■□□ 2.42
NDEL1-217ENST00000583683 CUX2O14529 1486 aa30.11■■■□□ 2.41
NDEL1-217ENST00000583683 RUSC2Q8N2Y8 1516 aa30.09■■■□□ 2.41
NDEL1-217ENST00000583683 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
NDEL1-217ENST00000583683 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
NDEL1-217ENST00000583683 WDR97A6NE52 1622 aa30.06■■■□□ 2.4
NDEL1-217ENST00000583683 FAM9AQ8IZU1 332 aaPredicted RBP30.04■■■□□ 2.4
NDEL1-217ENST00000583683 EEA1Q15075 1411 aa30.02■■■□□ 2.4
NDEL1-217ENST00000583683 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
NDEL1-217ENST00000583683 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
NDEL1-217ENST00000583683 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
NDEL1-217ENST00000583683 TDRD9Q8NDG6 1382 aaKnown RBP29.88■■■□□ 2.37
NDEL1-217ENST00000583683 CSRNP3Q8WYN3 585 aa29.87■■■□□ 2.37
NDEL1-217ENST00000583683 ZNF608Q9ULD9 1512 aaPredicted RBP29.84■■■□□ 2.37
NDEL1-217ENST00000583683 GAPVD1Q14C86 1478 aa29.81■■■□□ 2.36
NDEL1-217ENST00000583683 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.36
NDEL1-217ENST00000583683 IGF1RP08069 1367 aa29.78■■■□□ 2.36
NDEL1-217ENST00000583683 EIF4G3O43432 1585 aaKnown RBP29.77■■■□□ 2.36
NDEL1-217ENST00000583683 PBRM1Q86U86 1689 aa29.73■■■□□ 2.35
NDEL1-217ENST00000583683 ERICH3Q5RHP9 1530 aa29.72■■■□□ 2.35
NDEL1-217ENST00000583683 LOC105371045A0A1W2PR82 267 aa29.69■■■□□ 2.34
NDEL1-217ENST00000583683 KIF21BO75037 1637 aa29.69■■■□□ 2.34
NDEL1-217ENST00000583683 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
NDEL1-217ENST00000583683 GRIN2BQ13224 1484 aa29.66■■■□□ 2.34
NDEL1-217ENST00000583683 CUL7Q14999 1698 aa29.64■■■□□ 2.33
NDEL1-217ENST00000583683 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
NDEL1-217ENST00000583683 CARMIL1Q5VZK9 1371 aa29.61■■■□□ 2.33
NDEL1-217ENST00000583683 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
NDEL1-217ENST00000583683 GOLGA3Q08378 1498 aa29.57■■■□□ 2.32
NDEL1-217ENST00000583683 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
NDEL1-217ENST00000583683 SNAPC4Q5SXM2 1469 aa29.52■■■□□ 2.32
NDEL1-217ENST00000583683 MAGI1Q96QZ7 1491 aaPredicted RBP29.48■■■□□ 2.31
NDEL1-217ENST00000583683 FHAD1B1AJZ9 1412 aa29.48■■■□□ 2.31
NDEL1-217ENST00000583683 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
NDEL1-217ENST00000583683 TNIKQ9UKE5 1360 aa29.38■■■□□ 2.29
NDEL1-217ENST00000583683 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
NDEL1-217ENST00000583683 GRIN2AQ12879 1464 aa29.31■■■□□ 2.28
NDEL1-217ENST00000583683 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
NDEL1-217ENST00000583683 CTTNBP2Q8WZ74 1663 aa29.25■■■□□ 2.27
NDEL1-217ENST00000583683 FBLN2P98095 1184 aa29.23■■■□□ 2.27
NDEL1-217ENST00000583683 CHD1O14646 1710 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms