RNA–Protein interactions for RNA: ENST00000583634.1

TSEN54-210, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 282 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-210ENST00000583634 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
TSEN54-210ENST00000583634 ABCC9O60706 1549 aa26.34■■□□□ 1.81
TSEN54-210ENST00000583634 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
TSEN54-210ENST00000583634 DNAJC5BQ9UF47 199 aa24.94■■□□□ 1.58
TSEN54-210ENST00000583634 RB1CC1Q8TDY2 1594 aa24.91■■□□□ 1.58
TSEN54-210ENST00000583634 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
TSEN54-210ENST00000583634 NACADO15069 1562 aa24.68■■□□□ 1.54
TSEN54-210ENST00000583634 PABPN1Q86U42 306 aaKnown RBP eCLIP24.55■■□□□ 1.52
TSEN54-210ENST00000583634 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
TSEN54-210ENST00000583634 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
TSEN54-210ENST00000583634 BICRAQ9NZM4 1560 aa24.23■■□□□ 1.47
TSEN54-210ENST00000583634 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
TSEN54-210ENST00000583634 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
TSEN54-210ENST00000583634 SCRIBQ14160 1630 aa23.79■■□□□ 1.4
TSEN54-210ENST00000583634 SHROOM4Q9ULL8 1493 aa23.77■■□□□ 1.4
TSEN54-210ENST00000583634 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
TSEN54-210ENST00000583634 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
TSEN54-210ENST00000583634 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
TSEN54-210ENST00000583634 DNAJC5Q9H3Z4 198 aa22.98■■□□□ 1.27
TSEN54-210ENST00000583634 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
TSEN54-210ENST00000583634 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
TSEN54-210ENST00000583634 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
TSEN54-210ENST00000583634 CUX2O14529 1486 aa22.7■■□□□ 1.22
TSEN54-210ENST00000583634 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
TSEN54-210ENST00000583634 SMARCA2P51531 1590 aa22.62■■□□□ 1.21
TSEN54-210ENST00000583634 HMGXB3Q12766 1538 aa22.59■■□□□ 1.21
TSEN54-210ENST00000583634 NESP48681 1621 aa22.59■■□□□ 1.21
TSEN54-210ENST00000583634 BAZ1BQ9UIG0 1483 aaKnown RBP22.5■■□□□ 1.19
TSEN54-210ENST00000583634 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
TSEN54-210ENST00000583634 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.18
TSEN54-210ENST00000583634 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
TSEN54-210ENST00000583634 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
TSEN54-210ENST00000583634 LAMC3Q9Y6N6 1575 aa22.3■■□□□ 1.16
TSEN54-210ENST00000583634 KIF21AQ7Z4S6 1674 aa22.23■■□□□ 1.15
TSEN54-210ENST00000583634 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
TSEN54-210ENST00000583634 CADPSQ9ULU8 1353 aa22.13■■□□□ 1.13
TSEN54-210ENST00000583634 WIZO95785 1651 aa22.1■■□□□ 1.13
TSEN54-210ENST00000583634 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
TSEN54-210ENST00000583634 WDR62O43379 1518 aa21.97■■□□□ 1.11
TSEN54-210ENST00000583634 TRIM41Q8WV44 630 aa21.95■■□□□ 1.1
TSEN54-210ENST00000583634 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
TSEN54-210ENST00000583634 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
TSEN54-210ENST00000583634 RSF1Q96T23 1441 aaPredicted RBP21.84■■□□□ 1.09
TSEN54-210ENST00000583634 CFTRP13569 1480 aa21.83■■□□□ 1.08
TSEN54-210ENST00000583634 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
TSEN54-210ENST00000583634 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
TSEN54-210ENST00000583634 OSCARQ8IYS5 282 aa21.71■■□□□ 1.07
TSEN54-210ENST00000583634 SUPT5HO00267 1087 aaKnown RBP21.61■■□□□ 1.05
TSEN54-210ENST00000583634 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
TSEN54-210ENST00000583634 PRDM2Q13029 1718 aa21.54■■□□□ 1.04
TSEN54-210ENST00000583634 ZNF608Q9ULD9 1512 aaPredicted RBP21.51■■□□□ 1.03
TSEN54-210ENST00000583634 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
TSEN54-210ENST00000583634 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
TSEN54-210ENST00000583634 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
TSEN54-210ENST00000583634 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
TSEN54-210ENST00000583634 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
TSEN54-210ENST00000583634 ABCC8Q09428 1581 aa21.34■■□□□ 1.01
TSEN54-210ENST00000583634 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
TSEN54-210ENST00000583634 DNMBPQ6XZF7 1577 aa21.32■■□□□ 1
TSEN54-210ENST00000583634 ARHGEF11O15085 1522 aa21.32■■□□□ 1
TSEN54-210ENST00000583634 AQRO60306 1485 aaKnown RBP eCLIP21.31■■□□□ 16e-10■□□□□ 11
TSEN54-210ENST00000583634 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
TSEN54-210ENST00000583634 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
TSEN54-210ENST00000583634 FBLN2P98095 1184 aa21.23■□□□□ 0.99
TSEN54-210ENST00000583634 POLA1P09884 1462 aaPredicted RBP21.22■□□□□ 0.99
TSEN54-210ENST00000583634 CHD1O14646 1710 aa21.22■□□□□ 0.99
TSEN54-210ENST00000583634 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
TSEN54-210ENST00000583634 TDRD9Q8NDG6 1382 aaKnown RBP21.15■□□□□ 0.98
TSEN54-210ENST00000583634 SOGA1O94964 1423 aa21.13■□□□□ 0.97
TSEN54-210ENST00000583634 ARAP1Q96P48 1450 aa21.11■□□□□ 0.97
TSEN54-210ENST00000583634 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
TSEN54-210ENST00000583634 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
TSEN54-210ENST00000583634 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
TSEN54-210ENST00000583634 CUX1P39880 1505 aa21.02■□□□□ 0.96
TSEN54-210ENST00000583634 CHMP7Q8WUX9 453 aaPredicted RBP21.01■□□□□ 0.95
TSEN54-210ENST00000583634 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
TSEN54-210ENST00000583634 WDR97A6NE52 1622 aa20.95■□□□□ 0.94
TSEN54-210ENST00000583634 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
TSEN54-210ENST00000583634 MAGI1Q96QZ7 1491 aaPredicted RBP20.94■□□□□ 0.94
TSEN54-210ENST00000583634 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
TSEN54-210ENST00000583634 SYNJ2O15056 1496 aa20.89■□□□□ 0.94
TSEN54-210ENST00000583634 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
TSEN54-210ENST00000583634 PBRM1Q86U86 1689 aa20.83■□□□□ 0.93
TSEN54-210ENST00000583634 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
TSEN54-210ENST00000583634 ABCA5Q8WWZ7 1642 aa20.77■□□□□ 0.92
TSEN54-210ENST00000583634 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
TSEN54-210ENST00000583634 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
TSEN54-210ENST00000583634 GRIN2AQ12879 1464 aa20.68■□□□□ 0.9
TSEN54-210ENST00000583634 ADAMTS12P58397 1594 aa20.63■□□□□ 0.89
TSEN54-210ENST00000583634 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
TSEN54-210ENST00000583634 NUP160Q12769 1436 aa20.61■□□□□ 0.89
TSEN54-210ENST00000583634 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
TSEN54-210ENST00000583634 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
TSEN54-210ENST00000583634 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
TSEN54-210ENST00000583634 AEBP2Q6ZN18 517 aaPredicted RBP20.57■□□□□ 0.88
TSEN54-210ENST00000583634 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
TSEN54-210ENST00000583634 SHROOM2Q13796 1616 aa20.52■□□□□ 0.88
TSEN54-210ENST00000583634 ERICH3Q5RHP9 1530 aa20.5■□□□□ 0.87
TSEN54-210ENST00000583634 PRG4Q92954 1404 aaPredicted RBP20.46■□□□□ 0.87
TSEN54-210ENST00000583634 JPH4Q96JJ6 628 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms