RNA–Protein interactions for RNA: ENST00000583460.1

LINC00511-216, long intergenic non-protein coding RNA 511, humanhuman

TSL 5

Gene LINC00511, Length 757 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-216ENST00000583460 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
LINC00511-216ENST00000583460 ABCC9O60706 1549 aa29.75■■■□□ 2.35
LINC00511-216ENST00000583460 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
LINC00511-216ENST00000583460 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
LINC00511-216ENST00000583460 DNAJC5BQ9UF47 199 aa28.05■■■□□ 2.08
LINC00511-216ENST00000583460 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
LINC00511-216ENST00000583460 NACADO15069 1562 aa27.89■■■□□ 2.05
LINC00511-216ENST00000583460 PABPN1Q86U42 306 aaKnown RBP eCLIP27.72■■■□□ 2.03
LINC00511-216ENST00000583460 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
LINC00511-216ENST00000583460 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
LINC00511-216ENST00000583460 BICRAQ9NZM4 1560 aa27.26■■□□□ 1.96
LINC00511-216ENST00000583460 ZCCHC6Q5VYS8 1495 aaKnown RBP27.03■■□□□ 1.92
LINC00511-216ENST00000583460 DCAF1Q9Y4B6 1507 aa26.95■■□□□ 1.9
LINC00511-216ENST00000583460 SHROOM4Q9ULL8 1493 aa26.88■■□□□ 1.89
LINC00511-216ENST00000583460 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
LINC00511-216ENST00000583460 CECR2Q9BXF3 1484 aa26.8■■□□□ 1.88
LINC00511-216ENST00000583460 CC2D2AQ9P2K1 1620 aa26.79■■□□□ 1.88
LINC00511-216ENST00000583460 EIF4G1Q04637 1599 aaKnown RBP26.67■■□□□ 1.86
LINC00511-216ENST00000583460 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
LINC00511-216ENST00000583460 ERCC6Q03468 1493 aa25.75■■□□□ 1.71
LINC00511-216ENST00000583460 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
LINC00511-216ENST00000583460 CUX2O14529 1486 aa25.67■■□□□ 1.7
LINC00511-216ENST00000583460 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
LINC00511-216ENST00000583460 SMARCA2P51531 1590 aa25.58■■□□□ 1.69
LINC00511-216ENST00000583460 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
LINC00511-216ENST00000583460 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
LINC00511-216ENST00000583460 NESP48681 1621 aa25.45■■□□□ 1.67
LINC00511-216ENST00000583460 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
LINC00511-216ENST00000583460 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
LINC00511-216ENST00000583460 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
LINC00511-216ENST00000583460 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
LINC00511-216ENST00000583460 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
LINC00511-216ENST00000583460 THOC2Q8NI27 1593 aaKnown RBP25.17■■□□□ 1.62
LINC00511-216ENST00000583460 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
LINC00511-216ENST00000583460 KIF21AQ7Z4S6 1674 aa25.08■■□□□ 1.61
LINC00511-216ENST00000583460 CADPSQ9ULU8 1353 aa25■■□□□ 1.59
LINC00511-216ENST00000583460 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
LINC00511-216ENST00000583460 WIZO95785 1651 aa24.91■■□□□ 1.58
LINC00511-216ENST00000583460 MRC2Q9UBG0 1479 aa24.9■■□□□ 1.58
LINC00511-216ENST00000583460 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
LINC00511-216ENST00000583460 WDR62O43379 1518 aa24.8■■□□□ 1.56
LINC00511-216ENST00000583460 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
LINC00511-216ENST00000583460 FANCD2Q9BXW9 1451 aa24.72■■□□□ 1.55
LINC00511-216ENST00000583460 CFTRP13569 1480 aa24.63■■□□□ 1.53
LINC00511-216ENST00000583460 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
LINC00511-216ENST00000583460 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
LINC00511-216ENST00000583460 OSCARQ8IYS5 282 aa24.57■■□□□ 1.52
LINC00511-216ENST00000583460 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
LINC00511-216ENST00000583460 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
LINC00511-216ENST00000583460 PRDM2Q13029 1718 aa24.32■■□□□ 1.48
LINC00511-216ENST00000583460 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
LINC00511-216ENST00000583460 ZNF608Q9ULD9 1512 aaPredicted RBP24.25■■□□□ 1.47
LINC00511-216ENST00000583460 TOPBP1Q92547 1522 aa24.2■■□□□ 1.47
LINC00511-216ENST00000583460 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
LINC00511-216ENST00000583460 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
LINC00511-216ENST00000583460 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
LINC00511-216ENST00000583460 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
LINC00511-216ENST00000583460 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
LINC00511-216ENST00000583460 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.45
LINC00511-216ENST00000583460 ARHGEF11O15085 1522 aa24.07■■□□□ 1.44
LINC00511-216ENST00000583460 FBLN2P98095 1184 aa24.07■■□□□ 1.44
LINC00511-216ENST00000583460 CYB5RLQ6IPT4 315 aa24.04■■□□□ 1.44
LINC00511-216ENST00000583460 AQRO60306 1485 aaKnown RBP eCLIP24.04■■□□□ 1.44
LINC00511-216ENST00000583460 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.43
LINC00511-216ENST00000583460 CHD1O14646 1710 aa23.95■■□□□ 1.42
LINC00511-216ENST00000583460 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
LINC00511-216ENST00000583460 TRHP20396 242 aaPredicted RBP23.92■■□□□ 1.42
LINC00511-216ENST00000583460 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
LINC00511-216ENST00000583460 RAD54L2Q9Y4B4 1467 aa23.9■■□□□ 1.42
LINC00511-216ENST00000583460 SOGA1O94964 1423 aa23.9■■□□□ 1.42
LINC00511-216ENST00000583460 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.41
LINC00511-216ENST00000583460 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
LINC00511-216ENST00000583460 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
LINC00511-216ENST00000583460 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
LINC00511-216ENST00000583460 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
LINC00511-216ENST00000583460 WDR97A6NE52 1622 aa23.7■■□□□ 1.39
LINC00511-216ENST00000583460 CUX1P39880 1505 aa23.69■■□□□ 1.38
LINC00511-216ENST00000583460 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
LINC00511-216ENST00000583460 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
LINC00511-216ENST00000583460 MAGI1Q96QZ7 1491 aaPredicted RBP23.68■■□□□ 1.38
LINC00511-216ENST00000583460 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.37
LINC00511-216ENST00000583460 SYNJ2O15056 1496 aa23.62■■□□□ 1.37
LINC00511-216ENST00000583460 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
LINC00511-216ENST00000583460 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
LINC00511-216ENST00000583460 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
LINC00511-216ENST00000583460 ABCA10Q8WWZ4 1543 aa23.47■■□□□ 1.35
LINC00511-216ENST00000583460 ABCA5Q8WWZ7 1642 aa23.42■■□□□ 1.34
LINC00511-216ENST00000583460 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.34
LINC00511-216ENST00000583460 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
LINC00511-216ENST00000583460 ADAMTS12P58397 1594 aa23.28■■□□□ 1.32
LINC00511-216ENST00000583460 ERCC6L2Q5T890 1561 aa23.28■■□□□ 1.32
LINC00511-216ENST00000583460 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
LINC00511-216ENST00000583460 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
LINC00511-216ENST00000583460 NUP160Q12769 1436 aa23.25■■□□□ 1.31
LINC00511-216ENST00000583460 TOP2BQ02880 1626 aa23.25■■□□□ 1.31
LINC00511-216ENST00000583460 BIVM-ERCC5R4GMW8 1640 aa23.23■■□□□ 1.31
LINC00511-216ENST00000583460 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
LINC00511-216ENST00000583460 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
LINC00511-216ENST00000583460 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
LINC00511-216ENST00000583460 JPH4Q96JJ6 628 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms