RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
CCDC57-216ENST00000582885 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
CCDC57-216ENST00000582885 ABCC9O60706 1549 aa23.67■■□□□ 1.38
CCDC57-216ENST00000582885 ZCCHC6Q5VYS8 1495 aaKnown RBP23.62■■□□□ 1.37
CCDC57-216ENST00000582885 DCAF1Q9Y4B6 1507 aa23.43■■□□□ 1.34
CCDC57-216ENST00000582885 MYO15BQ96JP2 1530 aa23.33■■□□□ 1.32
CCDC57-216ENST00000582885 NACADO15069 1562 aa23.25■■□□□ 1.31
CCDC57-216ENST00000582885 DCAF8L2P0C7V8 631 aa23.18■■□□□ 1.3
CCDC57-216ENST00000582885 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
CCDC57-216ENST00000582885 UNC13AQ9UPW8 1703 aa22.72■■□□□ 1.23
CCDC57-216ENST00000582885 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
CCDC57-216ENST00000582885 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
CCDC57-216ENST00000582885 BICRAQ9NZM4 1560 aa22.41■■□□□ 1.18
CCDC57-216ENST00000582885 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
CCDC57-216ENST00000582885 CECR2Q9BXF3 1484 aa21.85■■□□□ 1.09
CCDC57-216ENST00000582885 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
CCDC57-216ENST00000582885 SMARCA4P51532 1647 aa21.8■■□□□ 1.08
CCDC57-216ENST00000582885 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
CCDC57-216ENST00000582885 MROH2BQ7Z745 1585 aa21.73■■□□□ 1.07
CCDC57-216ENST00000582885 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CCDC57-216ENST00000582885 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
CCDC57-216ENST00000582885 WIZO95785 1651 aa21.56■■□□□ 1.04
CCDC57-216ENST00000582885 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
CCDC57-216ENST00000582885 CC2D2AQ9P2K1 1620 aa21.52■■□□□ 1.04
CCDC57-216ENST00000582885 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
CCDC57-216ENST00000582885 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
CCDC57-216ENST00000582885 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
CCDC57-216ENST00000582885 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
CCDC57-216ENST00000582885 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
CCDC57-216ENST00000582885 BAZ1BQ9UIG0 1483 aaKnown RBP21.33■■□□□ 1.01
CCDC57-216ENST00000582885 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
CCDC57-216ENST00000582885 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
CCDC57-216ENST00000582885 PRDM2Q13029 1718 aa20.87■□□□□ 0.93
CCDC57-216ENST00000582885 CFTRP13569 1480 aa20.8■□□□□ 0.92
CCDC57-216ENST00000582885 LAMC3Q9Y6N6 1575 aa20.8■□□□□ 0.92
CCDC57-216ENST00000582885 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
CCDC57-216ENST00000582885 NESP48681 1621 aa20.67■□□□□ 0.9
CCDC57-216ENST00000582885 PDS5BQ9NTI5 1447 aa20.57■□□□□ 0.88
CCDC57-216ENST00000582885 KIF21AQ7Z4S6 1674 aa20.55■□□□□ 0.88
CCDC57-216ENST00000582885 FANCD2Q9BXW9 1451 aa20.54■□□□□ 0.88
CCDC57-216ENST00000582885 CEP164Q9UPV0 1460 aa20.47■□□□□ 0.87
CCDC57-216ENST00000582885 ABCC8Q09428 1581 aa20.46■□□□□ 0.87
CCDC57-216ENST00000582885 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
CCDC57-216ENST00000582885 WRNQ14191 1432 aaPredicted RBP eCLIP20.41■□□□□ 0.86
CCDC57-216ENST00000582885 BIVM-ERCC5R4GMW8 1640 aa20.41■□□□□ 0.86
CCDC57-216ENST00000582885 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
CCDC57-216ENST00000582885 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
CCDC57-216ENST00000582885 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
CCDC57-216ENST00000582885 DNMBPQ6XZF7 1577 aa20.36■□□□□ 0.85
CCDC57-216ENST00000582885 CUX1P39880 1505 aa20.36■□□□□ 0.85
CCDC57-216ENST00000582885 MRC2Q9UBG0 1479 aa20.33■□□□□ 0.85
CCDC57-216ENST00000582885 THOC2Q8NI27 1593 aaKnown RBP20.31■□□□□ 0.84
CCDC57-216ENST00000582885 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
CCDC57-216ENST00000582885 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
CCDC57-216ENST00000582885 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
CCDC57-216ENST00000582885 WDR62O43379 1518 aa20.27■□□□□ 0.84
CCDC57-216ENST00000582885 FGD5Q6ZNL6 1462 aa20.18■□□□□ 0.82
CCDC57-216ENST00000582885 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
CCDC57-216ENST00000582885 WDR97A6NE52 1622 aa20.1■□□□□ 0.81
CCDC57-216ENST00000582885 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
CCDC57-216ENST00000582885 CUX2O14529 1486 aa20.06■□□□□ 0.8
CCDC57-216ENST00000582885 SOGA1O94964 1423 aa20.06■□□□□ 0.8
CCDC57-216ENST00000582885 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
CCDC57-216ENST00000582885 IFT140Q96RY7 1462 aa20.03■□□□□ 0.8
CCDC57-216ENST00000582885 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
CCDC57-216ENST00000582885 EEA1Q15075 1411 aa19.99■□□□□ 0.79
CCDC57-216ENST00000582885 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
CCDC57-216ENST00000582885 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
CCDC57-216ENST00000582885 RUSC2Q8N2Y8 1516 aa19.92■□□□□ 0.78
CCDC57-216ENST00000582885 PBRM1Q86U86 1689 aa19.88■□□□□ 0.77
CCDC57-216ENST00000582885 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
CCDC57-216ENST00000582885 GAPVD1Q14C86 1478 aa19.86■□□□□ 0.77
CCDC57-216ENST00000582885 ZNF608Q9ULD9 1512 aaPredicted RBP19.85■□□□□ 0.77
CCDC57-216ENST00000582885 TDRD9Q8NDG6 1382 aaKnown RBP19.84■□□□□ 0.77
CCDC57-216ENST00000582885 ERICH3Q5RHP9 1530 aa19.83■□□□□ 0.77
CCDC57-216ENST00000582885 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
CCDC57-216ENST00000582885 CUL7Q14999 1698 aa19.81■□□□□ 0.76
CCDC57-216ENST00000582885 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
CCDC57-216ENST00000582885 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
CCDC57-216ENST00000582885 IGF1RP08069 1367 aa19.78■□□□□ 0.76
CCDC57-216ENST00000582885 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
CCDC57-216ENST00000582885 KIF21BO75037 1637 aa19.77■□□□□ 0.76
CCDC57-216ENST00000582885 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
CCDC57-216ENST00000582885 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
CCDC57-216ENST00000582885 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
CCDC57-216ENST00000582885 CARMIL1Q5VZK9 1371 aa19.67■□□□□ 0.74
CCDC57-216ENST00000582885 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
CCDC57-216ENST00000582885 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
CCDC57-216ENST00000582885 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
CCDC57-216ENST00000582885 GOLGA3Q08378 1498 aa19.63■□□□□ 0.73
CCDC57-216ENST00000582885 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
CCDC57-216ENST00000582885 CHD1O14646 1710 aa19.56■□□□□ 0.72
CCDC57-216ENST00000582885 CTTNBP2Q8WZ74 1663 aa19.56■□□□□ 0.72
CCDC57-216ENST00000582885 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
CCDC57-216ENST00000582885 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
CCDC57-216ENST00000582885 TNIKQ9UKE5 1360 aa19.49■□□□□ 0.71
CCDC57-216ENST00000582885 CHMP7Q8WUX9 453 aaPredicted RBP19.47■□□□□ 0.71
CCDC57-216ENST00000582885 UBTFP17480 764 aaKnown RBP19.46■□□□□ 0.71
CCDC57-216ENST00000582885 NUP160Q12769 1436 aa19.42■□□□□ 0.7
CCDC57-216ENST00000582885 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms