RNA–Protein interactions for RNA: ENST00000582481.1

SNX11-211, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-211ENST00000582481 NISCHQ9Y2I1 1504 aa24.01■■□□□ 1.43
SNX11-211ENST00000582481 ABCC9O60706 1549 aa22.36■■□□□ 1.17
SNX11-211ENST00000582481 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
SNX11-211ENST00000582481 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
SNX11-211ENST00000582481 RB1CC1Q8TDY2 1594 aa20.98■□□□□ 0.95
SNX11-211ENST00000582481 NACADO15069 1562 aa20.71■□□□□ 0.91
SNX11-211ENST00000582481 UNC13AQ9UPW8 1703 aa20.67■□□□□ 0.9
SNX11-211ENST00000582481 PABPN1Q86U42 306 aaKnown RBP eCLIP20.66■□□□□ 0.9
SNX11-211ENST00000582481 BICRAQ9NZM4 1560 aa20.55■□□□□ 0.88
SNX11-211ENST00000582481 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
SNX11-211ENST00000582481 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
SNX11-211ENST00000582481 CC2D2AQ9P2K1 1620 aa20.2■□□□□ 0.82
SNX11-211ENST00000582481 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
SNX11-211ENST00000582481 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
SNX11-211ENST00000582481 SHROOM4Q9ULL8 1493 aa20.07■□□□□ 0.8
SNX11-211ENST00000582481 EIF4G1Q04637 1599 aaKnown RBP20.01■□□□□ 0.79
SNX11-211ENST00000582481 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
SNX11-211ENST00000582481 SCRIBQ14160 1630 aa19.84■□□□□ 0.77
SNX11-211ENST00000582481 ZCCHC6Q5VYS8 1495 aaKnown RBP19.81■□□□□ 0.76
SNX11-211ENST00000582481 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
SNX11-211ENST00000582481 CUX2O14529 1486 aa19.48■□□□□ 0.71
SNX11-211ENST00000582481 ERCC6Q03468 1493 aa19.24■□□□□ 0.67
SNX11-211ENST00000582481 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
SNX11-211ENST00000582481 CHIC1Q5VXU3 224 aa19.11■□□□□ 0.65
SNX11-211ENST00000582481 NESP48681 1621 aa19.1■□□□□ 0.65
SNX11-211ENST00000582481 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
SNX11-211ENST00000582481 ATAD2BQ9ULI0 1458 aa19.02■□□□□ 0.63
SNX11-211ENST00000582481 HMGXB3Q12766 1538 aa18.98■□□□□ 0.63
SNX11-211ENST00000582481 TRIM41Q8WV44 630 aa18.92■□□□□ 0.62
SNX11-211ENST00000582481 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
SNX11-211ENST00000582481 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
SNX11-211ENST00000582481 KIF21AQ7Z4S6 1674 aa18.85■□□□□ 0.61
SNX11-211ENST00000582481 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
SNX11-211ENST00000582481 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
SNX11-211ENST00000582481 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
SNX11-211ENST00000582481 BAZ1AQ9NRL2 1556 aaPredicted RBP18.63■□□□□ 0.57
SNX11-211ENST00000582481 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
SNX11-211ENST00000582481 WDR62O43379 1518 aa18.61■□□□□ 0.57
SNX11-211ENST00000582481 MRC2Q9UBG0 1479 aa18.58■□□□□ 0.57
SNX11-211ENST00000582481 MROH2BQ7Z745 1585 aa18.53■□□□□ 0.56
SNX11-211ENST00000582481 CADPSQ9ULU8 1353 aa18.48■□□□□ 0.55
SNX11-211ENST00000582481 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
SNX11-211ENST00000582481 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
SNX11-211ENST00000582481 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
SNX11-211ENST00000582481 OSCARQ8IYS5 282 aa18.36■□□□□ 0.53
SNX11-211ENST00000582481 CEP164Q9UPV0 1460 aa18.36■□□□□ 0.53
SNX11-211ENST00000582481 FANCD2Q9BXW9 1451 aa18.31■□□□□ 0.52
SNX11-211ENST00000582481 WIZO95785 1651 aa18.28■□□□□ 0.52
SNX11-211ENST00000582481 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
SNX11-211ENST00000582481 ARHGEF11O15085 1522 aa18.25■□□□□ 0.51
SNX11-211ENST00000582481 CFTRP13569 1480 aa18.21■□□□□ 0.51
SNX11-211ENST00000582481 ZNF608Q9ULD9 1512 aaPredicted RBP18.13■□□□□ 0.49
SNX11-211ENST00000582481 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
SNX11-211ENST00000582481 PRDM2Q13029 1718 aa18.02■□□□□ 0.48
SNX11-211ENST00000582481 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
SNX11-211ENST00000582481 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
SNX11-211ENST00000582481 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
SNX11-211ENST00000582481 CHD1O14646 1710 aa17.99■□□□□ 0.47
SNX11-211ENST00000582481 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
SNX11-211ENST00000582481 TOPBP1Q92547 1522 aa17.93■□□□□ 0.46
SNX11-211ENST00000582481 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
SNX11-211ENST00000582481 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.46
SNX11-211ENST00000582481 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
SNX11-211ENST00000582481 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.45
SNX11-211ENST00000582481 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
SNX11-211ENST00000582481 CLASP1Q7Z460 1538 aa17.78■□□□□ 0.44
SNX11-211ENST00000582481 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
SNX11-211ENST00000582481 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
SNX11-211ENST00000582481 POLA1P09884 1462 aaPredicted RBP17.72■□□□□ 0.43
SNX11-211ENST00000582481 FBLN2P98095 1184 aa17.67■□□□□ 0.42
SNX11-211ENST00000582481 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
SNX11-211ENST00000582481 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
SNX11-211ENST00000582481 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
SNX11-211ENST00000582481 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
SNX11-211ENST00000582481 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
SNX11-211ENST00000582481 GAPVD1Q14C86 1478 aa17.55■□□□□ 0.4
SNX11-211ENST00000582481 MAGI1Q96QZ7 1491 aaPredicted RBP17.54■□□□□ 0.4
SNX11-211ENST00000582481 SOGA1O94964 1423 aa17.53■□□□□ 0.4
SNX11-211ENST00000582481 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
SNX11-211ENST00000582481 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
SNX11-211ENST00000582481 ERCC6L2Q5T890 1561 aa17.5■□□□□ 0.39
SNX11-211ENST00000582481 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
SNX11-211ENST00000582481 CHMP7Q8WUX9 453 aaPredicted RBP17.45■□□□□ 0.38
SNX11-211ENST00000582481 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
SNX11-211ENST00000582481 CUX1P39880 1505 aa17.44■□□□□ 0.38
SNX11-211ENST00000582481 KIF13AQ9H1H9 1805 aa17.43■□□□□ 0.38
SNX11-211ENST00000582481 ABCA5Q8WWZ7 1642 aa17.36■□□□□ 0.37
SNX11-211ENST00000582481 CEP170Q5SW79 1584 aa17.34■□□□□ 0.37
SNX11-211ENST00000582481 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
SNX11-211ENST00000582481 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
SNX11-211ENST00000582481 NUP160Q12769 1436 aa17.28■□□□□ 0.36
SNX11-211ENST00000582481 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
SNX11-211ENST00000582481 ILDR1Q86SU0 546 aaPredicted RBP17.26■□□□□ 0.35
SNX11-211ENST00000582481 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
SNX11-211ENST00000582481 KDM4FA0A1W2PPD8 638 aa17.22■□□□□ 0.35
SNX11-211ENST00000582481 DIP2BQ9P265 1576 aa17.17■□□□□ 0.34
SNX11-211ENST00000582481 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
SNX11-211ENST00000582481 MAPKBP1O60336 1514 aa17.11■□□□□ 0.33
SNX11-211ENST00000582481 KDM6BO15054 1643 aa17.1■□□□□ 0.33
SNX11-211ENST00000582481 PRG4Q92954 1404 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms