RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
CDC42EP4-208ENST00000582303 ABCC9O60706 1549 aa32.65■■■□□ 2.82
CDC42EP4-208ENST00000582303 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
CDC42EP4-208ENST00000582303 RB1CC1Q8TDY2 1594 aa31.13■■■□□ 2.57
CDC42EP4-208ENST00000582303 NACADO15069 1562 aa30.92■■■□□ 2.54
CDC42EP4-208ENST00000582303 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.51
CDC42EP4-208ENST00000582303 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
CDC42EP4-208ENST00000582303 MYO15BQ96JP2 1530 aa30.52■■■□□ 2.48
CDC42EP4-208ENST00000582303 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
CDC42EP4-208ENST00000582303 UNC13AQ9UPW8 1703 aa30.17■■■□□ 2.42
CDC42EP4-208ENST00000582303 ZCCHC6Q5VYS8 1495 aaKnown RBP30.1■■■□□ 2.41
CDC42EP4-208ENST00000582303 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
CDC42EP4-208ENST00000582303 DCAF1Q9Y4B6 1507 aa30.07■■■□□ 2.4
CDC42EP4-208ENST00000582303 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
CDC42EP4-208ENST00000582303 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
CDC42EP4-208ENST00000582303 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
CDC42EP4-208ENST00000582303 CC2D2AQ9P2K1 1620 aa29.46■■■□□ 2.31
CDC42EP4-208ENST00000582303 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
CDC42EP4-208ENST00000582303 NCAPD3P42695 1498 aa28.55■■■□□ 2.16
CDC42EP4-208ENST00000582303 ATAD2BQ9ULI0 1458 aa28.4■■■□□ 2.14
CDC42EP4-208ENST00000582303 SMARCA2P51531 1590 aa28.38■■■□□ 2.13
CDC42EP4-208ENST00000582303 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
CDC42EP4-208ENST00000582303 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
CDC42EP4-208ENST00000582303 ERCC6Q03468 1493 aa28.3■■■□□ 2.12
CDC42EP4-208ENST00000582303 DNAJC5Q9H3Z4 198 aa28.29■■■□□ 2.12
CDC42EP4-208ENST00000582303 CUX2O14529 1486 aa28.27■■■□□ 2.12
CDC42EP4-208ENST00000582303 BAZ1AQ9NRL2 1556 aaPredicted RBP28.25■■■□□ 2.11
CDC42EP4-208ENST00000582303 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
CDC42EP4-208ENST00000582303 PEG3Q9GZU2 1588 aa28.09■■■□□ 2.09
CDC42EP4-208ENST00000582303 NESP48681 1621 aa27.98■■■□□ 2.07
CDC42EP4-208ENST00000582303 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
CDC42EP4-208ENST00000582303 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
CDC42EP4-208ENST00000582303 PDS5BQ9NTI5 1447 aa27.82■■■□□ 2.04
CDC42EP4-208ENST00000582303 THOC2Q8NI27 1593 aaKnown RBP27.71■■■□□ 2.03
CDC42EP4-208ENST00000582303 CADPSQ9ULU8 1353 aa27.69■■■□□ 2.02
CDC42EP4-208ENST00000582303 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
CDC42EP4-208ENST00000582303 WIZO95785 1651 aa27.55■■■□□ 2
CDC42EP4-208ENST00000582303 MRC2Q9UBG0 1479 aa27.51■■□□□ 1.99
CDC42EP4-208ENST00000582303 WDR62O43379 1518 aa27.4■■□□□ 1.98
CDC42EP4-208ENST00000582303 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
CDC42EP4-208ENST00000582303 CEP164Q9UPV0 1460 aa27.39■■□□□ 1.98
CDC42EP4-208ENST00000582303 CFTRP13569 1480 aa27.34■■□□□ 1.97
CDC42EP4-208ENST00000582303 FANCD2Q9BXW9 1451 aa27.34■■□□□ 1.97
CDC42EP4-208ENST00000582303 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
CDC42EP4-208ENST00000582303 URB2Q14146 1524 aaKnown RBP27.05■■□□□ 1.92
CDC42EP4-208ENST00000582303 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
CDC42EP4-208ENST00000582303 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
CDC42EP4-208ENST00000582303 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
CDC42EP4-208ENST00000582303 PRDM2Q13029 1718 aa26.91■■□□□ 1.9
CDC42EP4-208ENST00000582303 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
CDC42EP4-208ENST00000582303 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
CDC42EP4-208ENST00000582303 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
CDC42EP4-208ENST00000582303 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.87
CDC42EP4-208ENST00000582303 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
CDC42EP4-208ENST00000582303 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
CDC42EP4-208ENST00000582303 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.83
CDC42EP4-208ENST00000582303 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
CDC42EP4-208ENST00000582303 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
CDC42EP4-208ENST00000582303 RIMBP3CA6NJZ7 1639 aa26.48■■□□□ 1.83
CDC42EP4-208ENST00000582303 RIMBP3BA6NNM3 1639 aa26.48■■□□□ 1.83
CDC42EP4-208ENST00000582303 RIMBP3Q9UFD9 1639 aa26.48■■□□□ 1.83
CDC42EP4-208ENST00000582303 ARHGEF11O15085 1522 aa26.46■■□□□ 1.83
CDC42EP4-208ENST00000582303 SOGA1O94964 1423 aa26.44■■□□□ 1.82
CDC42EP4-208ENST00000582303 FBLN2P98095 1184 aa26.43■■□□□ 1.82
CDC42EP4-208ENST00000582303 RAD54L2Q9Y4B4 1467 aa26.37■■□□□ 1.81
CDC42EP4-208ENST00000582303 WDR97A6NE52 1622 aa26.36■■□□□ 1.81
CDC42EP4-208ENST00000582303 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
CDC42EP4-208ENST00000582303 CYB5RLQ6IPT4 315 aa26.33■■□□□ 1.81
CDC42EP4-208ENST00000582303 FGD5Q6ZNL6 1462 aa26.33■■□□□ 1.81
CDC42EP4-208ENST00000582303 CHD1O14646 1710 aa26.31■■□□□ 1.8
CDC42EP4-208ENST00000582303 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
CDC42EP4-208ENST00000582303 CUX1P39880 1505 aa26.25■■□□□ 1.79
CDC42EP4-208ENST00000582303 SNAPC4Q5SXM2 1469 aa26.24■■□□□ 1.79
CDC42EP4-208ENST00000582303 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
CDC42EP4-208ENST00000582303 GRIN2BQ13224 1484 aa26.23■■□□□ 1.79
CDC42EP4-208ENST00000582303 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
CDC42EP4-208ENST00000582303 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
CDC42EP4-208ENST00000582303 SYNJ1O43426 1573 aa26.16■■□□□ 1.78
CDC42EP4-208ENST00000582303 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
CDC42EP4-208ENST00000582303 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
CDC42EP4-208ENST00000582303 TRHP20396 242 aaPredicted RBP26.1■■□□□ 1.77
CDC42EP4-208ENST00000582303 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
CDC42EP4-208ENST00000582303 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
CDC42EP4-208ENST00000582303 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
CDC42EP4-208ENST00000582303 PBRM1Q86U86 1689 aa25.96■■□□□ 1.75
CDC42EP4-208ENST00000582303 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
CDC42EP4-208ENST00000582303 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
CDC42EP4-208ENST00000582303 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
CDC42EP4-208ENST00000582303 BIVM-ERCC5R4GMW8 1640 aa25.81■■□□□ 1.72
CDC42EP4-208ENST00000582303 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
CDC42EP4-208ENST00000582303 NUP160Q12769 1436 aa25.78■■□□□ 1.72
CDC42EP4-208ENST00000582303 ADAMTS12P58397 1594 aa25.78■■□□□ 1.72
CDC42EP4-208ENST00000582303 ERICH3Q5RHP9 1530 aa25.76■■□□□ 1.71
CDC42EP4-208ENST00000582303 CEP170Q5SW79 1584 aa25.69■■□□□ 1.7
CDC42EP4-208ENST00000582303 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
CDC42EP4-208ENST00000582303 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
CDC42EP4-208ENST00000582303 JPH4Q96JJ6 628 aa25.56■■□□□ 1.68
CDC42EP4-208ENST00000582303 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
CDC42EP4-208ENST00000582303 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
CDC42EP4-208ENST00000582303 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms