RNA–Protein interactions for RNA: ENST00000582037.2

NLK-203, Transcript of nemo like kinase, humanhuman

TSL 2 BASIC

Gene NLK, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-203ENST00000582037 NISCHQ9Y2I1 1504 aa29.31■■■□□ 2.28
NLK-203ENST00000582037 ABCC9O60706 1549 aa26.76■■□□□ 1.87
NLK-203ENST00000582037 CCDC180Q9P1Z9 1646 aa26.36■■□□□ 1.81
NLK-203ENST00000582037 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
NLK-203ENST00000582037 RB1CC1Q8TDY2 1594 aa25.24■■□□□ 1.63
NLK-203ENST00000582037 NACADO15069 1562 aa25.02■■□□□ 1.6
NLK-203ENST00000582037 PABPN1Q86U42 306 aaKnown RBP eCLIP24.91■■□□□ 1.58
NLK-203ENST00000582037 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
NLK-203ENST00000582037 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
NLK-203ENST00000582037 BICRAQ9NZM4 1560 aa24.69■■□□□ 1.54
NLK-203ENST00000582037 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
NLK-203ENST00000582037 ZCCHC6Q5VYS8 1495 aaKnown RBP24.21■■□□□ 1.47
NLK-203ENST00000582037 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
NLK-203ENST00000582037 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
NLK-203ENST00000582037 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.45
NLK-203ENST00000582037 CECR2Q9BXF3 1484 aa24.12■■□□□ 1.45
NLK-203ENST00000582037 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
NLK-203ENST00000582037 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
NLK-203ENST00000582037 DNAJC5Q9H3Z4 198 aa23.63■■□□□ 1.37
NLK-203ENST00000582037 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
NLK-203ENST00000582037 CUX2O14529 1486 aa23.14■■□□□ 1.3
NLK-203ENST00000582037 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
NLK-203ENST00000582037 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
NLK-203ENST00000582037 NESP48681 1621 aa22.95■■□□□ 1.26
NLK-203ENST00000582037 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
NLK-203ENST00000582037 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
NLK-203ENST00000582037 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
NLK-203ENST00000582037 THOC2Q8NI27 1593 aaKnown RBP22.73■■□□□ 1.23
NLK-203ENST00000582037 BAZ1BQ9UIG0 1483 aaKnown RBP22.72■■□□□ 1.23
NLK-203ENST00000582037 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
NLK-203ENST00000582037 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
NLK-203ENST00000582037 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
NLK-203ENST00000582037 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
NLK-203ENST00000582037 KIF21AQ7Z4S6 1674 aa22.57■■□□□ 1.2
NLK-203ENST00000582037 PDS5BQ9NTI5 1447 aa22.48■■□□□ 1.19
NLK-203ENST00000582037 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
NLK-203ENST00000582037 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
NLK-203ENST00000582037 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
NLK-203ENST00000582037 WDR62O43379 1518 aa22.33■■□□□ 1.17
NLK-203ENST00000582037 AEBP2Q6ZN18 517 aaPredicted RBP22.32■■□□□ 1.16
NLK-203ENST00000582037 WIZO95785 1651 aa22.3■■□□□ 1.16
NLK-203ENST00000582037 CEP164Q9UPV0 1460 aa22.16■■□□□ 1.14
NLK-203ENST00000582037 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
NLK-203ENST00000582037 CFTRP13569 1480 aa22.11■■□□□ 1.13
NLK-203ENST00000582037 OSCARQ8IYS5 282 aa22.05■■□□□ 1.12
NLK-203ENST00000582037 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
NLK-203ENST00000582037 RSF1Q96T23 1441 aaPredicted RBP22.02■■□□□ 1.12
NLK-203ENST00000582037 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
NLK-203ENST00000582037 ZNF608Q9ULD9 1512 aaPredicted RBP21.85■■□□□ 1.09
NLK-203ENST00000582037 RIMBP3CA6NJZ7 1639 aa21.82■■□□□ 1.08
NLK-203ENST00000582037 RIMBP3BA6NNM3 1639 aa21.82■■□□□ 1.08
NLK-203ENST00000582037 RIMBP3Q9UFD9 1639 aa21.82■■□□□ 1.08
NLK-203ENST00000582037 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
NLK-203ENST00000582037 CCDC88BA6NC98 1476 aa21.76■■□□□ 1.07
NLK-203ENST00000582037 IFT140Q96RY7 1462 aa21.74■■□□□ 1.07
NLK-203ENST00000582037 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
NLK-203ENST00000582037 TOPBP1Q92547 1522 aa21.71■■□□□ 1.07
NLK-203ENST00000582037 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
NLK-203ENST00000582037 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
NLK-203ENST00000582037 CYB5RLQ6IPT4 315 aa21.59■■□□□ 1.05
NLK-203ENST00000582037 AQRO60306 1485 aaKnown RBP eCLIP21.59■■□□□ 1.05
NLK-203ENST00000582037 DNMBPQ6XZF7 1577 aa21.56■■□□□ 1.04
NLK-203ENST00000582037 ABCC8Q09428 1581 aa21.55■■□□□ 1.04
NLK-203ENST00000582037 CHD1O14646 1710 aa21.53■■□□□ 1.04
NLK-203ENST00000582037 ARAP1Q96P48 1450 aa21.52■■□□□ 1.04
NLK-203ENST00000582037 POLA1P09884 1462 aaPredicted RBP21.48■■□□□ 1.03
NLK-203ENST00000582037 RAD54L2Q9Y4B4 1467 aa21.43■■□□□ 1.02
NLK-203ENST00000582037 FBLN2P98095 1184 aa21.39■■□□□ 1.02
NLK-203ENST00000582037 TDRD9Q8NDG6 1382 aaKnown RBP21.39■■□□□ 1.01
NLK-203ENST00000582037 TRHP20396 242 aaPredicted RBP21.35■■□□□ 1.01
NLK-203ENST00000582037 SOGA1O94964 1423 aa21.35■■□□□ 1.01
NLK-203ENST00000582037 CLASP1Q7Z460 1538 aa21.33■■□□□ 1
NLK-203ENST00000582037 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
NLK-203ENST00000582037 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
NLK-203ENST00000582037 CUX1P39880 1505 aa21.25■□□□□ 0.99
NLK-203ENST00000582037 WDR97A6NE52 1622 aa21.21■□□□□ 0.99
NLK-203ENST00000582037 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
NLK-203ENST00000582037 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
NLK-203ENST00000582037 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
NLK-203ENST00000582037 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
NLK-203ENST00000582037 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
NLK-203ENST00000582037 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
NLK-203ENST00000582037 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
NLK-203ENST00000582037 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
NLK-203ENST00000582037 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
NLK-203ENST00000582037 ABCA10Q8WWZ4 1543 aa21.02■□□□□ 0.96
NLK-203ENST00000582037 GRIN2AQ12879 1464 aa20.93■□□□□ 0.94
NLK-203ENST00000582037 NUP160Q12769 1436 aa20.91■□□□□ 0.94
NLK-203ENST00000582037 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
NLK-203ENST00000582037 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
NLK-203ENST00000582037 ADAMTS12P58397 1594 aa20.86■□□□□ 0.93
NLK-203ENST00000582037 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
NLK-203ENST00000582037 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
NLK-203ENST00000582037 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.92
NLK-203ENST00000582037 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.92
NLK-203ENST00000582037 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
NLK-203ENST00000582037 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
NLK-203ENST00000582037 KIF13AQ9H1H9 1805 aa20.76■□□□□ 0.91
NLK-203ENST00000582037 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
NLK-203ENST00000582037 PRG4Q92954 1404 aaPredicted RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms