RNA–Protein interactions for RNA: ENST00000581967.1

CTC1-210, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-210ENST00000581967 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.24
CTC1-210ENST00000581967 ABCC9O60706 1549 aa15.07■□□□□ 0
CTC1-210ENST00000581967 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
CTC1-210ENST00000581967 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
CTC1-210ENST00000581967 RB1CC1Q8TDY2 1594 aa14.26□□□□□ -0.13
CTC1-210ENST00000581967 NACADO15069 1562 aa14.15□□□□□ -0.14
CTC1-210ENST00000581967 DCAF8L2P0C7V8 631 aa14.07□□□□□ -0.16
CTC1-210ENST00000581967 PABPN1Q86U42 306 aaKnown RBP eCLIP14.04□□□□□ -0.16
CTC1-210ENST00000581967 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
CTC1-210ENST00000581967 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
CTC1-210ENST00000581967 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
CTC1-210ENST00000581967 DCAF1Q9Y4B6 1507 aa13.69□□□□□ -0.22
CTC1-210ENST00000581967 ZCCHC6Q5VYS8 1495 aaKnown RBP13.69□□□□□ -0.22
CTC1-210ENST00000581967 SHROOM4Q9ULL8 1493 aa13.69□□□□□ -0.22
CTC1-210ENST00000581967 CECR2Q9BXF3 1484 aa13.6□□□□□ -0.23
CTC1-210ENST00000581967 CC2D2AQ9P2K1 1620 aa13.57□□□□□ -0.24
CTC1-210ENST00000581967 SCRIBQ14160 1630 aa13.55□□□□□ -0.24
CTC1-210ENST00000581967 EIF4G1Q04637 1599 aaKnown RBP13.53□□□□□ -0.24
CTC1-210ENST00000581967 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
CTC1-210ENST00000581967 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
CTC1-210ENST00000581967 CUX2O14529 1486 aa13.06□□□□□ -0.32
CTC1-210ENST00000581967 ERCC6Q03468 1493 aa13.02□□□□□ -0.33
CTC1-210ENST00000581967 ATAD2BQ9ULI0 1458 aa13.02□□□□□ -0.33
CTC1-210ENST00000581967 SMARCA2P51531 1590 aa12.96□□□□□ -0.33
CTC1-210ENST00000581967 HMGXB3Q12766 1538 aa12.95□□□□□ -0.34
CTC1-210ENST00000581967 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
CTC1-210ENST00000581967 NESP48681 1621 aa12.89□□□□□ -0.35
CTC1-210ENST00000581967 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
CTC1-210ENST00000581967 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
CTC1-210ENST00000581967 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
CTC1-210ENST00000581967 LAMC3Q9Y6N6 1575 aa12.77□□□□□ -0.36
CTC1-210ENST00000581967 MROH2BQ7Z745 1585 aa12.76□□□□□ -0.37
CTC1-210ENST00000581967 THOC2Q8NI27 1593 aaKnown RBP12.76□□□□□ -0.37
CTC1-210ENST00000581967 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
CTC1-210ENST00000581967 CADPSQ9ULU8 1353 aa12.69□□□□□ -0.38
CTC1-210ENST00000581967 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
CTC1-210ENST00000581967 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
CTC1-210ENST00000581967 WDR62O43379 1518 aa12.58□□□□□ -0.4
CTC1-210ENST00000581967 TRIM41Q8WV44 630 aa12.58□□□□□ -0.4
CTC1-210ENST00000581967 WIZO95785 1651 aa12.54□□□□□ -0.4
CTC1-210ENST00000581967 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
CTC1-210ENST00000581967 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
CTC1-210ENST00000581967 CFTRP13569 1480 aa12.51□□□□□ -0.41
CTC1-210ENST00000581967 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
CTC1-210ENST00000581967 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
CTC1-210ENST00000581967 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
CTC1-210ENST00000581967 URB2Q14146 1524 aaKnown RBP12.42□□□□□ -0.42
CTC1-210ENST00000581967 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
CTC1-210ENST00000581967 CCDC88BA6NC98 1476 aa12.31□□□□□ -0.44
CTC1-210ENST00000581967 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
CTC1-210ENST00000581967 TOPBP1Q92547 1522 aa12.26□□□□□ -0.45
CTC1-210ENST00000581967 ABCC8Q09428 1581 aa12.25□□□□□ -0.45
CTC1-210ENST00000581967 RIMBP3CA6NJZ7 1639 aa12.24□□□□□ -0.45
CTC1-210ENST00000581967 RIMBP3BA6NNM3 1639 aa12.24□□□□□ -0.45
CTC1-210ENST00000581967 RIMBP3Q9UFD9 1639 aa12.24□□□□□ -0.45
CTC1-210ENST00000581967 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
CTC1-210ENST00000581967 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
CTC1-210ENST00000581967 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
CTC1-210ENST00000581967 CYB5RLQ6IPT4 315 aa12.18□□□□□ -0.46
CTC1-210ENST00000581967 AQRO60306 1485 aaKnown RBP eCLIP12.18□□□□□ -0.46
CTC1-210ENST00000581967 EIF4G3O43432 1585 aaKnown RBP12.17□□□□□ -0.46
CTC1-210ENST00000581967 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.47
CTC1-210ENST00000581967 FBLN2P98095 1184 aa12.13□□□□□ -0.47
CTC1-210ENST00000581967 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
CTC1-210ENST00000581967 SOGA1O94964 1423 aa12.1□□□□□ -0.47
CTC1-210ENST00000581967 ARAP1Q96P48 1450 aa12.09□□□□□ -0.47
CTC1-210ENST00000581967 TDRD9Q8NDG6 1382 aaKnown RBP12.09□□□□□ -0.47
CTC1-210ENST00000581967 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.47
CTC1-210ENST00000581967 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
CTC1-210ENST00000581967 CHD1O14646 1710 aa12.07□□□□□ -0.48
CTC1-210ENST00000581967 CHMP7Q8WUX9 453 aaPredicted RBP12.04□□□□□ -0.48
CTC1-210ENST00000581967 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.48
CTC1-210ENST00000581967 FGD5Q6ZNL6 1462 aa12.02□□□□□ -0.48
CTC1-210ENST00000581967 WDR97A6NE52 1622 aa12.01□□□□□ -0.49
CTC1-210ENST00000581967 MAGI1Q96QZ7 1491 aaPredicted RBP12.01□□□□□ -0.49
CTC1-210ENST00000581967 CLASP1Q7Z460 1538 aa12.01□□□□□ -0.49
CTC1-210ENST00000581967 GRIN2BQ13224 1484 aa12□□□□□ -0.49
CTC1-210ENST00000581967 CUX1P39880 1505 aa12□□□□□ -0.49
CTC1-210ENST00000581967 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
CTC1-210ENST00000581967 SYNJ2O15056 1496 aa11.97□□□□□ -0.49
CTC1-210ENST00000581967 GAPVD1Q14C86 1478 aa11.94□□□□□ -0.5
CTC1-210ENST00000581967 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.5
CTC1-210ENST00000581967 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
CTC1-210ENST00000581967 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
CTC1-210ENST00000581967 AEBP2Q6ZN18 517 aaPredicted RBP11.84□□□□□ -0.51
CTC1-210ENST00000581967 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
CTC1-210ENST00000581967 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
CTC1-210ENST00000581967 NUP160Q12769 1436 aa11.82□□□□□ -0.52
CTC1-210ENST00000581967 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
CTC1-210ENST00000581967 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
CTC1-210ENST00000581967 FHAD1B1AJZ9 1412 aa11.79□□□□□ -0.52
CTC1-210ENST00000581967 CEP170Q5SW79 1584 aa11.78□□□□□ -0.52
CTC1-210ENST00000581967 ADAMTS12P58397 1594 aa11.77□□□□□ -0.53
CTC1-210ENST00000581967 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
CTC1-210ENST00000581967 ERICH3Q5RHP9 1530 aa11.74□□□□□ -0.53
CTC1-210ENST00000581967 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
CTC1-210ENST00000581967 BIVM-ERCC5R4GMW8 1640 aa11.72□□□□□ -0.53
CTC1-210ENST00000581967 JPH4Q96JJ6 628 aa11.72□□□□□ -0.53
CTC1-210ENST00000581967 PRG4Q92954 1404 aaPredicted RBP11.71□□□□□ -0.53
CTC1-210ENST00000581967 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms