RNA–Protein interactions for RNA: ENST00000581956.1

KRT18P55-203, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 3

Gene KRT18P55, Length 662 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-203ENST00000581956 NISCHQ9Y2I1 1504 aa55.92■■■■■ 6.54
KRT18P55-203ENST00000581956 CCDC180Q9P1Z9 1646 aa49.72■■■■■ 5.55
KRT18P55-203ENST00000581956 ABCC9O60706 1549 aa48.71■■■■■ 5.39
KRT18P55-203ENST00000581956 DCAF8L2P0C7V8 631 aa46.78■■■■■ 5.08
KRT18P55-203ENST00000581956 RB1CC1Q8TDY2 1594 aa46.76■■■■■ 5.08
KRT18P55-203ENST00000581956 NACADO15069 1562 aa46.68■■■■■ 5.06
KRT18P55-203ENST00000581956 ZCCHC6Q5VYS8 1495 aaKnown RBP46.6■■■■■ 5.05
KRT18P55-203ENST00000581956 MYO15BQ96JP2 1530 aa46.32■■■■■ 5.01
KRT18P55-203ENST00000581956 DCAF1Q9Y4B6 1507 aa46.18■■■■■ 4.98
KRT18P55-203ENST00000581956 UNC13AQ9UPW8 1703 aa45.94■■■■■ 4.94
KRT18P55-203ENST00000581956 PABPN1Q86U42 306 aaKnown RBP eCLIP45.53■■■■■ 4.88
KRT18P55-203ENST00000581956 SCRIBQ14160 1630 aa45.49■■■■■ 4.87
KRT18P55-203ENST00000581956 BICRAQ9NZM4 1560 aa45.45■■■■■ 4.87
KRT18P55-203ENST00000581956 SHROOM4Q9ULL8 1493 aa44.72■■■■■ 4.75
KRT18P55-203ENST00000581956 DNAJC5BQ9UF47 199 aa44.71■■■■■ 4.75
KRT18P55-203ENST00000581956 EIF4G1Q04637 1599 aaKnown RBP44.21■■■■■ 4.67
KRT18P55-203ENST00000581956 CC2D2AQ9P2K1 1620 aa44.06■■■■■ 4.64
KRT18P55-203ENST00000581956 CECR2Q9BXF3 1484 aa43.7■■■■■ 4.59
KRT18P55-203ENST00000581956 SMARCA4P51532 1647 aa43.45■■■■■ 4.55
KRT18P55-203ENST00000581956 BAZ1AQ9NRL2 1556 aaPredicted RBP43.32■■■■■ 4.52
KRT18P55-203ENST00000581956 MROH2BQ7Z745 1585 aa43.17■■■■■ 4.5
KRT18P55-203ENST00000581956 ATAD2BQ9ULI0 1458 aa43.15■■■■■ 4.5
KRT18P55-203ENST00000581956 NCAPD3P42695 1498 aa43.06■■■■■ 4.48
KRT18P55-203ENST00000581956 SMARCA2P51531 1590 aa43.05■■■■■ 4.48
KRT18P55-203ENST00000581956 PEG3Q9GZU2 1588 aa42.94■■■■■ 4.46
KRT18P55-203ENST00000581956 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
KRT18P55-203ENST00000581956 BAZ1BQ9UIG0 1483 aaKnown RBP42.8■■■■■ 4.44
KRT18P55-203ENST00000581956 WIZO95785 1651 aa42.78■■■■■ 4.44
KRT18P55-203ENST00000581956 RSF1Q96T23 1441 aaPredicted RBP42.63■■■■■ 4.41
KRT18P55-203ENST00000581956 TOP2AP11388 1531 aaKnown RBP42.2■■■■■ 4.35
KRT18P55-203ENST00000581956 NESP48681 1621 aa42.2■■■■■ 4.35
KRT18P55-203ENST00000581956 LAMC3Q9Y6N6 1575 aa41.96■■■■■ 4.31
KRT18P55-203ENST00000581956 ERCC6Q03468 1493 aa41.91■■■■■ 4.3
KRT18P55-203ENST00000581956 CADPSQ9ULU8 1353 aa41.82■■■■■ 4.29
KRT18P55-203ENST00000581956 KIF21AQ7Z4S6 1674 aa41.74■■■■■ 4.27
KRT18P55-203ENST00000581956 CCDC88BA6NC98 1476 aa41.72■■■■■ 4.27
KRT18P55-203ENST00000581956 SUPT5HO00267 1087 aaKnown RBP41.63■■■■■ 4.25
KRT18P55-203ENST00000581956 PDS5BQ9NTI5 1447 aa41.62■■■■■ 4.25
KRT18P55-203ENST00000581956 CFTRP13569 1480 aa41.59■■■■■ 4.25
KRT18P55-203ENST00000581956 THOC2Q8NI27 1593 aaKnown RBP41.53■■■■■ 4.24
KRT18P55-203ENST00000581956 PRDM2Q13029 1718 aa41.43■■■■■ 4.22
KRT18P55-203ENST00000581956 CUX2O14529 1486 aa41.39■■■■■ 4.22
KRT18P55-203ENST00000581956 FANCD2Q9BXW9 1451 aa41.39■■■■■ 4.22
KRT18P55-203ENST00000581956 CEP164Q9UPV0 1460 aa41.33■■■■■ 4.21
KRT18P55-203ENST00000581956 MRC2Q9UBG0 1479 aa41.27■■■■■ 4.2
KRT18P55-203ENST00000581956 WDR62O43379 1518 aa41.14■■■■■ 4.18
KRT18P55-203ENST00000581956 URB2Q14146 1524 aaKnown RBP41.03■■■■■ 4.16
KRT18P55-203ENST00000581956 TOPBP1Q92547 1522 aa40.76■■■■■ 4.12
KRT18P55-203ENST00000581956 DNMBPQ6XZF7 1577 aa40.7■■■■■ 4.11
KRT18P55-203ENST00000581956 ABCC8Q09428 1581 aa40.61■■■■■ 4.09
KRT18P55-203ENST00000581956 CUX1P39880 1505 aa40.5■■■■■ 4.07
KRT18P55-203ENST00000581956 IFT140Q96RY7 1462 aa40.43■■■■■ 4.06
KRT18P55-203ENST00000581956 POLA1P09884 1462 aaPredicted RBP40.41■■■■■ 4.06
KRT18P55-203ENST00000581956 ZNF608Q9ULD9 1512 aaPredicted RBP40.37■■■■■ 4.05
KRT18P55-203ENST00000581956 TARBP1Q13395 1621 aaKnown RBP40.34■■■■■ 4.05
KRT18P55-203ENST00000581956 FGD5Q6ZNL6 1462 aa40.33■■■■■ 4.05
KRT18P55-203ENST00000581956 RAD54L2Q9Y4B4 1467 aa40.29■■■■■ 4.04
KRT18P55-203ENST00000581956 SOGA1O94964 1423 aa40.21■■■■■ 4.03
KRT18P55-203ENST00000581956 EIF4G3O43432 1585 aaKnown RBP40.21■■■■■ 4.03
KRT18P55-203ENST00000581956 SYNJ1O43426 1573 aa40.18■■■■■ 4.02
KRT18P55-203ENST00000581956 WRNQ14191 1432 aaPredicted RBP eCLIP40.17■■■■■ 4.02
KRT18P55-203ENST00000581956 BIVM-ERCC5R4GMW8 1640 aa40.15■■■■■ 4.02
KRT18P55-203ENST00000581956 TOP2BQ02880 1626 aa40.12■■■■■ 4.01
KRT18P55-203ENST00000581956 DNAJC5Q9H3Z4 198 aa40.11■■■■■ 4.01
KRT18P55-203ENST00000581956 AQRO60306 1485 aaKnown RBP eCLIP40.11■■■■■ 4.01
KRT18P55-203ENST00000581956 WDR97A6NE52 1622 aa40.06■■■■■ 4
KRT18P55-203ENST00000581956 TDRD9Q8NDG6 1382 aaKnown RBP40.02■■■■■ 4
KRT18P55-203ENST00000581956 ABCA10Q8WWZ4 1543 aa39.88■■■■□ 3.97
KRT18P55-203ENST00000581956 PBRM1Q86U86 1689 aa39.8■■■■□ 3.96
KRT18P55-203ENST00000581956 ABCA5Q8WWZ7 1642 aa39.8■■■■□ 3.96
KRT18P55-203ENST00000581956 CHD1O14646 1710 aa39.78■■■■□ 3.96
KRT18P55-203ENST00000581956 GAPVD1Q14C86 1478 aa39.75■■■■□ 3.95
KRT18P55-203ENST00000581956 SNAPC4Q5SXM2 1469 aa39.74■■■■□ 3.95
KRT18P55-203ENST00000581956 GRIN2BQ13224 1484 aa39.72■■■■□ 3.95
KRT18P55-203ENST00000581956 OSCARQ8IYS5 282 aa39.68■■■■□ 3.94
KRT18P55-203ENST00000581956 FBLN2P98095 1184 aa39.6■■■■□ 3.93
KRT18P55-203ENST00000581956 MAGI1Q96QZ7 1491 aaPredicted RBP39.59■■■■□ 3.93
KRT18P55-203ENST00000581956 SYNJ2O15056 1496 aa39.46■■■■□ 3.91
KRT18P55-203ENST00000581956 CHMP7Q8WUX9 453 aaPredicted RBP39.43■■■■□ 3.9
KRT18P55-203ENST00000581956 ADAMTS12P58397 1594 aa39.42■■■■□ 3.9
KRT18P55-203ENST00000581956 ERICH3Q5RHP9 1530 aa39.39■■■■□ 3.9
KRT18P55-203ENST00000581956 KIF27Q86VH2 1401 aa39.29■■■■□ 3.88
KRT18P55-203ENST00000581956 FHAD1B1AJZ9 1412 aa39.25■■■■□ 3.87
KRT18P55-203ENST00000581956 GRIN2AQ12879 1464 aa39.24■■■■□ 3.87
KRT18P55-203ENST00000581956 CLASP1Q7Z460 1538 aa39.23■■■■□ 3.87
KRT18P55-203ENST00000581956 TRIM41Q8WV44 630 aa39.22■■■■□ 3.87
KRT18P55-203ENST00000581956 RIMBP3CA6NJZ7 1639 aa39.2■■■■□ 3.87
KRT18P55-203ENST00000581956 RIMBP3BA6NNM3 1639 aa39.2■■■■□ 3.87
KRT18P55-203ENST00000581956 RIMBP3Q9UFD9 1639 aa39.2■■■■□ 3.87
KRT18P55-203ENST00000581956 IGF1RP08069 1367 aa39.15■■■■□ 3.86
KRT18P55-203ENST00000581956 ARHGEF11O15085 1522 aa39.13■■■■□ 3.85
KRT18P55-203ENST00000581956 RUSC2Q8N2Y8 1516 aa39.13■■■■□ 3.85
KRT18P55-203ENST00000581956 CEP170Q5SW79 1584 aa39.12■■■■□ 3.85
KRT18P55-203ENST00000581956 CUL7Q14999 1698 aa39.09■■■■□ 3.85
KRT18P55-203ENST00000581956 NUP160Q12769 1436 aa39.04■■■■□ 3.84
KRT18P55-203ENST00000581956 CARMIL1Q5VZK9 1371 aa38.93■■■■□ 3.82
KRT18P55-203ENST00000581956 ARAP1Q96P48 1450 aa38.85■■■■□ 3.81
KRT18P55-203ENST00000581956 CHIC1Q5VXU3 224 aa38.82■■■■□ 3.8
KRT18P55-203ENST00000581956 ERCC6L2Q5T890 1561 aa38.81■■■■□ 3.8
KRT18P55-203ENST00000581956 SHROOM2Q13796 1616 aa38.8■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms