RNA–Protein interactions for RNA: ENST00000581898.5

CUEDC1-210, Transcript of CUE domain containing 1, humanhuman

TSL 5

Gene CUEDC1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-210ENST00000581898 NISCHQ9Y2I1 1504 aa25.14■■□□□ 1.62
CUEDC1-210ENST00000581898 ABCC9O60706 1549 aa22.91■■□□□ 1.26
CUEDC1-210ENST00000581898 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
CUEDC1-210ENST00000581898 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
CUEDC1-210ENST00000581898 RB1CC1Q8TDY2 1594 aa21.68■■□□□ 1.06
CUEDC1-210ENST00000581898 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
CUEDC1-210ENST00000581898 NACADO15069 1562 aa21.48■■□□□ 1.03
CUEDC1-210ENST00000581898 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
CUEDC1-210ENST00000581898 MYO15BQ96JP2 1530 aa21.11■□□□□ 0.97
CUEDC1-210ENST00000581898 UNC13AQ9UPW8 1703 aa21.04■□□□□ 0.96
CUEDC1-210ENST00000581898 BICRAQ9NZM4 1560 aa21■□□□□ 0.95
CUEDC1-210ENST00000581898 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
CUEDC1-210ENST00000581898 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
CUEDC1-210ENST00000581898 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
CUEDC1-210ENST00000581898 CECR2Q9BXF3 1484 aa20.68■□□□□ 0.9
CUEDC1-210ENST00000581898 CC2D2AQ9P2K1 1620 aa20.64■□□□□ 0.89
CUEDC1-210ENST00000581898 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
CUEDC1-210ENST00000581898 EIF4G1Q04637 1599 aaKnown RBP20.54■□□□□ 0.88
CUEDC1-210ENST00000581898 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
CUEDC1-210ENST00000581898 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
CUEDC1-210ENST00000581898 CUX2O14529 1486 aa19.86■□□□□ 0.77
CUEDC1-210ENST00000581898 ERCC6Q03468 1493 aa19.83■□□□□ 0.76
CUEDC1-210ENST00000581898 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
CUEDC1-210ENST00000581898 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
CUEDC1-210ENST00000581898 HMGXB3Q12766 1538 aa19.63■□□□□ 0.73
CUEDC1-210ENST00000581898 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
CUEDC1-210ENST00000581898 NESP48681 1621 aa19.58■□□□□ 0.73
CUEDC1-210ENST00000581898 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
CUEDC1-210ENST00000581898 BAZ1AQ9NRL2 1556 aaPredicted RBP19.53■□□□□ 0.72
CUEDC1-210ENST00000581898 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
CUEDC1-210ENST00000581898 LAMC3Q9Y6N6 1575 aa19.41■□□□□ 0.7
CUEDC1-210ENST00000581898 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
CUEDC1-210ENST00000581898 THOC2Q8NI27 1593 aaKnown RBP19.36■□□□□ 0.69
CUEDC1-210ENST00000581898 MROH2BQ7Z745 1585 aa19.35■□□□□ 0.69
CUEDC1-210ENST00000581898 CADPSQ9ULU8 1353 aa19.3■□□□□ 0.68
CUEDC1-210ENST00000581898 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
CUEDC1-210ENST00000581898 TRIM41Q8WV44 630 aa19.22■□□□□ 0.67
CUEDC1-210ENST00000581898 MRC2Q9UBG0 1479 aa19.17■□□□□ 0.66
CUEDC1-210ENST00000581898 WDR62O43379 1518 aa19.1■□□□□ 0.65
CUEDC1-210ENST00000581898 WIZO95785 1651 aa19.06■□□□□ 0.64
CUEDC1-210ENST00000581898 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
CUEDC1-210ENST00000581898 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
CUEDC1-210ENST00000581898 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CUEDC1-210ENST00000581898 CFTRP13569 1480 aa18.97■□□□□ 0.63
CUEDC1-210ENST00000581898 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
CUEDC1-210ENST00000581898 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
CUEDC1-210ENST00000581898 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
CUEDC1-210ENST00000581898 IFT140Q96RY7 1462 aa18.71■□□□□ 0.59
CUEDC1-210ENST00000581898 CCDC88BA6NC98 1476 aa18.68■□□□□ 0.58
CUEDC1-210ENST00000581898 ZNF608Q9ULD9 1512 aaPredicted RBP18.66■□□□□ 0.58
CUEDC1-210ENST00000581898 ABCC8Q09428 1581 aa18.63■□□□□ 0.57
CUEDC1-210ENST00000581898 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
CUEDC1-210ENST00000581898 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
CUEDC1-210ENST00000581898 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
CUEDC1-210ENST00000581898 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
CUEDC1-210ENST00000581898 CYB5RLQ6IPT4 315 aa18.6■□□□□ 0.57
CUEDC1-210ENST00000581898 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
CUEDC1-210ENST00000581898 ARHGEF11O15085 1522 aa18.58■□□□□ 0.56
CUEDC1-210ENST00000581898 FBLN2P98095 1184 aa18.54■□□□□ 0.56
CUEDC1-210ENST00000581898 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.55
CUEDC1-210ENST00000581898 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
CUEDC1-210ENST00000581898 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
CUEDC1-210ENST00000581898 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
CUEDC1-210ENST00000581898 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
CUEDC1-210ENST00000581898 POLA1P09884 1462 aaPredicted RBP18.41■□□□□ 0.54
CUEDC1-210ENST00000581898 SOGA1O94964 1423 aa18.4■□□□□ 0.54
CUEDC1-210ENST00000581898 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
CUEDC1-210ENST00000581898 CHD1O14646 1710 aa18.36■□□□□ 0.53
CUEDC1-210ENST00000581898 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
CUEDC1-210ENST00000581898 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
CUEDC1-210ENST00000581898 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
CUEDC1-210ENST00000581898 SNAPC4Q5SXM2 1469 aa18.26■□□□□ 0.51
CUEDC1-210ENST00000581898 FGD5Q6ZNL6 1462 aa18.25■□□□□ 0.51
CUEDC1-210ENST00000581898 WDR97A6NE52 1622 aa18.23■□□□□ 0.51
CUEDC1-210ENST00000581898 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
CUEDC1-210ENST00000581898 MAGI1Q96QZ7 1491 aaPredicted RBP18.23■□□□□ 0.51
CUEDC1-210ENST00000581898 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
CUEDC1-210ENST00000581898 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
CUEDC1-210ENST00000581898 SYNJ2O15056 1496 aa18.19■□□□□ 0.5
CUEDC1-210ENST00000581898 CUX1P39880 1505 aa18.18■□□□□ 0.5
CUEDC1-210ENST00000581898 AEBP2Q6ZN18 517 aaPredicted RBP18.14■□□□□ 0.49
CUEDC1-210ENST00000581898 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
CUEDC1-210ENST00000581898 ABCA10Q8WWZ4 1543 aa18.05■□□□□ 0.48
CUEDC1-210ENST00000581898 PBRM1Q86U86 1689 aa17.99■□□□□ 0.47
CUEDC1-210ENST00000581898 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
CUEDC1-210ENST00000581898 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
CUEDC1-210ENST00000581898 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
CUEDC1-210ENST00000581898 GRIN2AQ12879 1464 aa17.96■□□□□ 0.47
CUEDC1-210ENST00000581898 NUP160Q12769 1436 aa17.91■□□□□ 0.46
CUEDC1-210ENST00000581898 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
CUEDC1-210ENST00000581898 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
CUEDC1-210ENST00000581898 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
CUEDC1-210ENST00000581898 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
CUEDC1-210ENST00000581898 ADAMTS12P58397 1594 aa17.84■□□□□ 0.45
CUEDC1-210ENST00000581898 TOP2BQ02880 1626 aa17.83■□□□□ 0.44
CUEDC1-210ENST00000581898 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
CUEDC1-210ENST00000581898 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
CUEDC1-210ENST00000581898 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
CUEDC1-210ENST00000581898 SHROOM2Q13796 1616 aa17.8■□□□□ 0.44
CUEDC1-210ENST00000581898 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms