RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 NISCHQ9Y2I1 1504 aa49.42■■■■■ 5.5
SNX11-209ENST00000581705 CCDC180Q9P1Z9 1646 aa44.18■■■■■ 4.66
SNX11-209ENST00000581705 ABCC9O60706 1549 aa43.87■■■■■ 4.61
SNX11-209ENST00000581705 RB1CC1Q8TDY2 1594 aa41.9■■■■■ 4.3
SNX11-209ENST00000581705 NACADO15069 1562 aa41.71■■■■■ 4.27
SNX11-209ENST00000581705 DCAF8L2P0C7V8 631 aa41.52■■■■■ 4.24
SNX11-209ENST00000581705 MYO15BQ96JP2 1530 aa41.29■■■■■ 4.2
SNX11-209ENST00000581705 ZCCHC6Q5VYS8 1495 aaKnown RBP41.02■■■■■ 4.16
SNX11-209ENST00000581705 UNC13AQ9UPW8 1703 aa40.91■■■■■ 4.14
SNX11-209ENST00000581705 PABPN1Q86U42 306 aaKnown RBP eCLIP40.9■■■■■ 4.14
SNX11-209ENST00000581705 DNAJC5BQ9UF47 199 aa40.9■■■■■ 4.14
SNX11-209ENST00000581705 DCAF1Q9Y4B6 1507 aa40.86■■■■■ 4.13
SNX11-209ENST00000581705 BICRAQ9NZM4 1560 aa40.68■■■■■ 4.1
SNX11-209ENST00000581705 SCRIBQ14160 1630 aa40.25■■■■■ 4.03
SNX11-209ENST00000581705 SHROOM4Q9ULL8 1493 aa40.2■■■■■ 4.03
SNX11-209ENST00000581705 EIF4G1Q04637 1599 aaKnown RBP39.66■■■■□ 3.94
SNX11-209ENST00000581705 CC2D2AQ9P2K1 1620 aa39.64■■■■□ 3.94
SNX11-209ENST00000581705 CECR2Q9BXF3 1484 aa39.5■■■■□ 3.91
SNX11-209ENST00000581705 NCAPD3P42695 1498 aa38.53■■■■□ 3.76
SNX11-209ENST00000581705 SMARCA4P51532 1647 aa38.45■■■■□ 3.75
SNX11-209ENST00000581705 ATAD2BQ9ULI0 1458 aa38.44■■■■□ 3.74
SNX11-209ENST00000581705 SMARCA2P51531 1590 aa38.34■■■■□ 3.73
SNX11-209ENST00000581705 BAZ1AQ9NRL2 1556 aaPredicted RBP38.32■■■■□ 3.73
SNX11-209ENST00000581705 HMGXB3Q12766 1538 aa38.25■■■■□ 3.71
SNX11-209ENST00000581705 PEG3Q9GZU2 1588 aa38.11■■■■□ 3.69
SNX11-209ENST00000581705 BAZ1BQ9UIG0 1483 aaKnown RBP38.07■■■■□ 3.68
SNX11-209ENST00000581705 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
SNX11-209ENST00000581705 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
SNX11-209ENST00000581705 NESP48681 1621 aa37.78■■■■□ 3.64
SNX11-209ENST00000581705 CUX2O14529 1486 aa37.7■■■■□ 3.63
SNX11-209ENST00000581705 WIZO95785 1651 aa37.6■■■■□ 3.61
SNX11-209ENST00000581705 LAMC3Q9Y6N6 1575 aa37.58■■■■□ 3.61
SNX11-209ENST00000581705 RSF1Q96T23 1441 aaPredicted RBP37.42■■■■□ 3.58
SNX11-209ENST00000581705 PDS5BQ9NTI5 1447 aa37.37■■■■□ 3.57
SNX11-209ENST00000581705 CADPSQ9ULU8 1353 aa37.37■■■■□ 3.57
SNX11-209ENST00000581705 DNAJC5Q9H3Z4 198 aa37.35■■■■□ 3.57
SNX11-209ENST00000581705 THOC2Q8NI27 1593 aaKnown RBP37.32■■■■□ 3.57
SNX11-209ENST00000581705 KIF21AQ7Z4S6 1674 aa37.27■■■■□ 3.56
SNX11-209ENST00000581705 TOP2AP11388 1531 aaKnown RBP37.17■■■■□ 3.54
SNX11-209ENST00000581705 MRC2Q9UBG0 1479 aa37.02■■■■□ 3.52
SNX11-209ENST00000581705 CFTRP13569 1480 aa37.01■■■■□ 3.51
SNX11-209ENST00000581705 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
SNX11-209ENST00000581705 WDR62O43379 1518 aa36.92■■■■□ 3.5
SNX11-209ENST00000581705 FANCD2Q9BXW9 1451 aa36.92■■■■□ 3.5
SNX11-209ENST00000581705 CCDC88BA6NC98 1476 aa36.75■■■■□ 3.47
SNX11-209ENST00000581705 URB2Q14146 1524 aaKnown RBP36.6■■■■□ 3.45
SNX11-209ENST00000581705 PRDM2Q13029 1718 aa36.59■■■■□ 3.45
SNX11-209ENST00000581705 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
SNX11-209ENST00000581705 TOPBP1Q92547 1522 aa36.25■■■■□ 3.39
SNX11-209ENST00000581705 ABCC8Q09428 1581 aa36.22■■■■□ 3.39
SNX11-209ENST00000581705 IFT140Q96RY7 1462 aa36.19■■■■□ 3.38
SNX11-209ENST00000581705 DNMBPQ6XZF7 1577 aa36.15■■■■□ 3.38
SNX11-209ENST00000581705 ZNF608Q9ULD9 1512 aaPredicted RBP36.09■■■■□ 3.37
SNX11-209ENST00000581705 OSCARQ8IYS5 282 aa36.05■■■■□ 3.36
SNX11-209ENST00000581705 POLA1P09884 1462 aaPredicted RBP35.91■■■■□ 3.34
SNX11-209ENST00000581705 TARBP1Q13395 1621 aaKnown RBP35.91■■■■□ 3.34
SNX11-209ENST00000581705 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
SNX11-209ENST00000581705 AQRO60306 1485 aaKnown RBP eCLIP35.8■■■■□ 3.32
SNX11-209ENST00000581705 TRIM41Q8WV44 630 aa35.78■■■■□ 3.32
SNX11-209ENST00000581705 RAD54L2Q9Y4B4 1467 aa35.76■■■■□ 3.31
SNX11-209ENST00000581705 SOGA1O94964 1423 aa35.75■■■■□ 3.31
SNX11-209ENST00000581705 CUX1P39880 1505 aa35.75■■■■□ 3.31
SNX11-209ENST00000581705 FGD5Q6ZNL6 1462 aa35.72■■■■□ 3.31
SNX11-209ENST00000581705 TDRD9Q8NDG6 1382 aaKnown RBP35.64■■■■□ 3.3
SNX11-209ENST00000581705 WDR97A6NE52 1622 aa35.58■■■■□ 3.29
SNX11-209ENST00000581705 CHD1O14646 1710 aa35.53■■■■□ 3.28
SNX11-209ENST00000581705 RIMBP3CA6NJZ7 1639 aa35.49■■■■□ 3.27
SNX11-209ENST00000581705 RIMBP3BA6NNM3 1639 aa35.49■■■■□ 3.27
SNX11-209ENST00000581705 RIMBP3Q9UFD9 1639 aa35.49■■■■□ 3.27
SNX11-209ENST00000581705 FBLN2P98095 1184 aa35.49■■■■□ 3.27
SNX11-209ENST00000581705 SNAPC4Q5SXM2 1469 aa35.44■■■■□ 3.26
SNX11-209ENST00000581705 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
SNX11-209ENST00000581705 GRIN2BQ13224 1484 aa35.41■■■■□ 3.26
SNX11-209ENST00000581705 MAGI1Q96QZ7 1491 aaPredicted RBP35.38■■■■□ 3.25
SNX11-209ENST00000581705 ABCA10Q8WWZ4 1543 aa35.35■■■■□ 3.25
SNX11-209ENST00000581705 GAPVD1Q14C86 1478 aa35.32■■■■□ 3.24
SNX11-209ENST00000581705 CHMP7Q8WUX9 453 aaPredicted RBP35.31■■■■□ 3.24
SNX11-209ENST00000581705 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
SNX11-209ENST00000581705 SYNJ2O15056 1496 aa35.26■■■■□ 3.24
SNX11-209ENST00000581705 TOP2BQ02880 1626 aa35.26■■■■□ 3.23
SNX11-209ENST00000581705 ABCA5Q8WWZ7 1642 aa35.25■■■■□ 3.23
SNX11-209ENST00000581705 BIVM-ERCC5R4GMW8 1640 aa35.24■■■■□ 3.23
SNX11-209ENST00000581705 PBRM1Q86U86 1689 aa35.23■■■■□ 3.23
SNX11-209ENST00000581705 SYNJ1O43426 1573 aa35.21■■■■□ 3.23
SNX11-209ENST00000581705 CLASP1Q7Z460 1538 aa35.18■■■■□ 3.22
SNX11-209ENST00000581705 CYB5RLQ6IPT4 315 aa35.16■■■■□ 3.22
SNX11-209ENST00000581705 ARAP1Q96P48 1450 aa35.12■■■■□ 3.21
SNX11-209ENST00000581705 ADAMTS12P58397 1594 aa34.96■■■■□ 3.19
SNX11-209ENST00000581705 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
SNX11-209ENST00000581705 ERICH3Q5RHP9 1530 aa34.91■■■■□ 3.18
SNX11-209ENST00000581705 FHAD1B1AJZ9 1412 aa34.9■■■■□ 3.18
SNX11-209ENST00000581705 NUP160Q12769 1436 aa34.84■■■■□ 3.17
SNX11-209ENST00000581705 CEP170Q5SW79 1584 aa34.8■■■■□ 3.16
SNX11-209ENST00000581705 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
SNX11-209ENST00000581705 TRHP20396 242 aaPredicted RBP34.64■■■■□ 3.14
SNX11-209ENST00000581705 ERCC6L2Q5T890 1561 aa34.64■■■■□ 3.14
SNX11-209ENST00000581705 SHROOM2Q13796 1616 aa34.62■■■■□ 3.13
SNX11-209ENST00000581705 KIF27Q86VH2 1401 aa34.59■■■■□ 3.13
SNX11-209ENST00000581705 IGF1RP08069 1367 aa34.56■■■■□ 3.12
SNX11-209ENST00000581705 JPH4Q96JJ6 628 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms