RNA–Protein interactions for RNA: ENST00000581400.2

SKAP1-204, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 5

Gene SKAP1, Length 783 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-204ENST00000581400 NISCHQ9Y2I1 1504 aa18.75■□□□□ 0.59
SKAP1-204ENST00000581400 ABCC9O60706 1549 aa17.25■□□□□ 0.35
SKAP1-204ENST00000581400 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
SKAP1-204ENST00000581400 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
SKAP1-204ENST00000581400 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
SKAP1-204ENST00000581400 NACADO15069 1562 aa16.13■□□□□ 0.17
SKAP1-204ENST00000581400 AEBP2Q6ZN18 517 aaPredicted RBP15.99■□□□□ 0.15
SKAP1-204ENST00000581400 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
SKAP1-204ENST00000581400 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
SKAP1-204ENST00000581400 UNC13AQ9UPW8 1703 aa15.91■□□□□ 0.14
SKAP1-204ENST00000581400 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
SKAP1-204ENST00000581400 BICRAQ9NZM4 1560 aa15.82■□□□□ 0.12
SKAP1-204ENST00000581400 SHROOM4Q9ULL8 1493 aa15.63■□□□□ 0.09
SKAP1-204ENST00000581400 CECR2Q9BXF3 1484 aa15.59■□□□□ 0.09
SKAP1-204ENST00000581400 CC2D2AQ9P2K1 1620 aa15.57■□□□□ 0.08
SKAP1-204ENST00000581400 DCAF1Q9Y4B6 1507 aa15.49■□□□□ 0.07
SKAP1-204ENST00000581400 ZCCHC6Q5VYS8 1495 aaKnown RBP15.48■□□□□ 0.07
SKAP1-204ENST00000581400 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
SKAP1-204ENST00000581400 SCRIBQ14160 1630 aa15.43■□□□□ 0.06
SKAP1-204ENST00000581400 DNAJC5Q9H3Z4 198 aa15.33■□□□□ 0.04
SKAP1-204ENST00000581400 CHIC1Q5VXU3 224 aa15.08■□□□□ 0
SKAP1-204ENST00000581400 CUX2O14529 1486 aa15.03■□□□□ -0
SKAP1-204ENST00000581400 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
SKAP1-204ENST00000581400 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
SKAP1-204ENST00000581400 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SKAP1-204ENST00000581400 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
SKAP1-204ENST00000581400 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
SKAP1-204ENST00000581400 NESP48681 1621 aa14.72□□□□□ -0.05
SKAP1-204ENST00000581400 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
SKAP1-204ENST00000581400 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
SKAP1-204ENST00000581400 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
SKAP1-204ENST00000581400 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
SKAP1-204ENST00000581400 BAZ1AQ9NRL2 1556 aaPredicted RBP14.6□□□□□ -0.07
SKAP1-204ENST00000581400 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
SKAP1-204ENST00000581400 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
SKAP1-204ENST00000581400 KIF21AQ7Z4S6 1674 aa14.53□□□□□ -0.08
SKAP1-204ENST00000581400 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
SKAP1-204ENST00000581400 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
SKAP1-204ENST00000581400 MRC2Q9UBG0 1479 aa14.42□□□□□ -0.1
SKAP1-204ENST00000581400 CADPSQ9ULU8 1353 aa14.41□□□□□ -0.1
SKAP1-204ENST00000581400 WDR62O43379 1518 aa14.4□□□□□ -0.1
SKAP1-204ENST00000581400 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
SKAP1-204ENST00000581400 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
SKAP1-204ENST00000581400 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
SKAP1-204ENST00000581400 WIZO95785 1651 aa14.24□□□□□ -0.13
SKAP1-204ENST00000581400 CFTRP13569 1480 aa14.18□□□□□ -0.14
SKAP1-204ENST00000581400 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
SKAP1-204ENST00000581400 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
SKAP1-204ENST00000581400 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
SKAP1-204ENST00000581400 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
SKAP1-204ENST00000581400 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
SKAP1-204ENST00000581400 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
SKAP1-204ENST00000581400 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
SKAP1-204ENST00000581400 IFT140Q96RY7 1462 aa14.03□□□□□ -0.16
SKAP1-204ENST00000581400 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
SKAP1-204ENST00000581400 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
SKAP1-204ENST00000581400 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
SKAP1-204ENST00000581400 EIF4G3O43432 1585 aaKnown RBP13.94□□□□□ -0.18
SKAP1-204ENST00000581400 CYB5RLQ6IPT4 315 aa13.94□□□□□ -0.18
SKAP1-204ENST00000581400 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
SKAP1-204ENST00000581400 TRHP20396 242 aaPredicted RBP13.9□□□□□ -0.18
SKAP1-204ENST00000581400 CCDC88BA6NC98 1476 aa13.89□□□□□ -0.19
SKAP1-204ENST00000581400 CHD1O14646 1710 aa13.88□□□□□ -0.19
SKAP1-204ENST00000581400 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
SKAP1-204ENST00000581400 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
SKAP1-204ENST00000581400 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.19
SKAP1-204ENST00000581400 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
SKAP1-204ENST00000581400 FBLN2P98095 1184 aa13.83□□□□□ -0.2
SKAP1-204ENST00000581400 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
SKAP1-204ENST00000581400 POLA1P09884 1462 aaPredicted RBP13.78□□□□□ -0.2
SKAP1-204ENST00000581400 CLASP1Q7Z460 1538 aa13.73□□□□□ -0.21
SKAP1-204ENST00000581400 RAD54L2Q9Y4B4 1467 aa13.72□□□□□ -0.21
SKAP1-204ENST00000581400 SOGA1O94964 1423 aa13.72□□□□□ -0.21
SKAP1-204ENST00000581400 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
SKAP1-204ENST00000581400 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.21
SKAP1-204ENST00000581400 SNAPC4Q5SXM2 1469 aa13.71□□□□□ -0.21
SKAP1-204ENST00000581400 SYNJ1O43426 1573 aa13.71□□□□□ -0.22
SKAP1-204ENST00000581400 MAGI1Q96QZ7 1491 aaPredicted RBP13.68□□□□□ -0.22
SKAP1-204ENST00000581400 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
SKAP1-204ENST00000581400 FGD5Q6ZNL6 1462 aa13.65□□□□□ -0.22
SKAP1-204ENST00000581400 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
SKAP1-204ENST00000581400 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
SKAP1-204ENST00000581400 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
SKAP1-204ENST00000581400 CUX1P39880 1505 aa13.59□□□□□ -0.23
SKAP1-204ENST00000581400 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
SKAP1-204ENST00000581400 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
SKAP1-204ENST00000581400 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
SKAP1-204ENST00000581400 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
SKAP1-204ENST00000581400 GRIN2AQ12879 1464 aa13.47□□□□□ -0.25
SKAP1-204ENST00000581400 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SKAP1-204ENST00000581400 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
SKAP1-204ENST00000581400 NUP160Q12769 1436 aa13.43□□□□□ -0.26
SKAP1-204ENST00000581400 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
SKAP1-204ENST00000581400 SHROOM2Q13796 1616 aa13.4□□□□□ -0.26
SKAP1-204ENST00000581400 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SKAP1-204ENST00000581400 KIF13AQ9H1H9 1805 aa13.38□□□□□ -0.27
SKAP1-204ENST00000581400 FHAD1B1AJZ9 1412 aa13.37□□□□□ -0.27
SKAP1-204ENST00000581400 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
SKAP1-204ENST00000581400 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
SKAP1-204ENST00000581400 TOP2BQ02880 1626 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms