RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 NISCHQ9Y2I1 1504 aa17.81■□□□□ 0.44
SNX11-208ENST00000581298 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
SNX11-208ENST00000581298 CCDC180Q9P1Z9 1646 aa15.85■□□□□ 0.13
SNX11-208ENST00000581298 ABCC9O60706 1549 aa15.58■□□□□ 0.09
SNX11-208ENST00000581298 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
SNX11-208ENST00000581298 DNAJC5BQ9UF47 199 aa15.39■□□□□ 0.05
SNX11-208ENST00000581298 NACADO15069 1562 aa14.98□□□□□ -0.01
SNX11-208ENST00000581298 RB1CC1Q8TDY2 1594 aa14.98□□□□□ -0.01
SNX11-208ENST00000581298 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
SNX11-208ENST00000581298 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
SNX11-208ENST00000581298 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
SNX11-208ENST00000581298 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
SNX11-208ENST00000581298 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
SNX11-208ENST00000581298 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
SNX11-208ENST00000581298 UNC13AQ9UPW8 1703 aa14.56□□□□□ -0.08
SNX11-208ENST00000581298 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
SNX11-208ENST00000581298 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
SNX11-208ENST00000581298 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
SNX11-208ENST00000581298 SENP3Q9H4L4 574 aaPredicted RBP14.19□□□□□ -0.14
SNX11-208ENST00000581298 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
SNX11-208ENST00000581298 CECR2Q9BXF3 1484 aa14.14□□□□□ -0.15
SNX11-208ENST00000581298 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
SNX11-208ENST00000581298 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
SNX11-208ENST00000581298 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
SNX11-208ENST00000581298 CUX2O14529 1486 aa13.84□□□□□ -0.19
SNX11-208ENST00000581298 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
SNX11-208ENST00000581298 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
SNX11-208ENST00000581298 SMARCA4P51532 1647 aa13.79□□□□□ -0.2
SNX11-208ENST00000581298 SMARCA2P51531 1590 aa13.76□□□□□ -0.21
SNX11-208ENST00000581298 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
SNX11-208ENST00000581298 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
SNX11-208ENST00000581298 TRIM41Q8WV44 630 aa13.73□□□□□ -0.21
SNX11-208ENST00000581298 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
SNX11-208ENST00000581298 BAZ1BQ9UIG0 1483 aaKnown RBP13.62□□□□□ -0.23
SNX11-208ENST00000581298 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.25
SNX11-208ENST00000581298 ERCC6Q03468 1493 aa13.51□□□□□ -0.25
SNX11-208ENST00000581298 NESP48681 1621 aa13.46□□□□□ -0.25
SNX11-208ENST00000581298 WIZO95785 1651 aa13.46□□□□□ -0.26
SNX11-208ENST00000581298 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
SNX11-208ENST00000581298 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
SNX11-208ENST00000581298 PDS5BQ9NTI5 1447 aa13.39□□□□□ -0.27
SNX11-208ENST00000581298 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
SNX11-208ENST00000581298 CFTRP13569 1480 aa13.33□□□□□ -0.28
SNX11-208ENST00000581298 THOC2Q8NI27 1593 aaKnown RBP13.31□□□□□ -0.28
SNX11-208ENST00000581298 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
SNX11-208ENST00000581298 CCDC88BA6NC98 1476 aa13.23□□□□□ -0.29
SNX11-208ENST00000581298 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
SNX11-208ENST00000581298 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
SNX11-208ENST00000581298 WDR62O43379 1518 aa13.21□□□□□ -0.29
SNX11-208ENST00000581298 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
SNX11-208ENST00000581298 FOXD1Q16676 465 aa13.17□□□□□ -0.3
SNX11-208ENST00000581298 URB2Q14146 1524 aaKnown RBP13.1□□□□□ -0.31
SNX11-208ENST00000581298 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
SNX11-208ENST00000581298 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
SNX11-208ENST00000581298 ABCC8Q09428 1581 aa13.04□□□□□ -0.32
SNX11-208ENST00000581298 TOPBP1Q92547 1522 aa13□□□□□ -0.33
SNX11-208ENST00000581298 IFT140Q96RY7 1462 aa12.98□□□□□ -0.33
SNX11-208ENST00000581298 RIMBP3CA6NJZ7 1639 aa12.98□□□□□ -0.33
SNX11-208ENST00000581298 RIMBP3BA6NNM3 1639 aa12.98□□□□□ -0.33
SNX11-208ENST00000581298 RIMBP3Q9UFD9 1639 aa12.98□□□□□ -0.33
SNX11-208ENST00000581298 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
SNX11-208ENST00000581298 SUPT5HO00267 1087 aaKnown RBP12.93□□□□□ -0.34
SNX11-208ENST00000581298 TRHP20396 242 aaPredicted RBP12.9□□□□□ -0.34
SNX11-208ENST00000581298 ZNF608Q9ULD9 1512 aaPredicted RBP12.89□□□□□ -0.35
SNX11-208ENST00000581298 POLA1P09884 1462 aaPredicted RBP12.89□□□□□ -0.35
SNX11-208ENST00000581298 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
SNX11-208ENST00000581298 CUX1P39880 1505 aa12.83□□□□□ -0.35
SNX11-208ENST00000581298 SOGA1O94964 1423 aa12.83□□□□□ -0.36
SNX11-208ENST00000581298 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
SNX11-208ENST00000581298 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
SNX11-208ENST00000581298 AQRO60306 1485 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNX11-208ENST00000581298 FGD5Q6ZNL6 1462 aa12.8□□□□□ -0.36
SNX11-208ENST00000581298 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
SNX11-208ENST00000581298 ILDR1Q86SU0 546 aaPredicted RBP12.79□□□□□ -0.36
SNX11-208ENST00000581298 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
SNX11-208ENST00000581298 CYB5RLQ6IPT4 315 aa12.77□□□□□ -0.37
SNX11-208ENST00000581298 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
SNX11-208ENST00000581298 TDRD9Q8NDG6 1382 aaKnown RBP12.75□□□□□ -0.37
SNX11-208ENST00000581298 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
SNX11-208ENST00000581298 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.37
SNX11-208ENST00000581298 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
SNX11-208ENST00000581298 MAGI1Q96QZ7 1491 aaPredicted RBP12.7□□□□□ -0.38
SNX11-208ENST00000581298 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
SNX11-208ENST00000581298 BIVM-ERCC5R4GMW8 1640 aa12.67□□□□□ -0.38
SNX11-208ENST00000581298 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
SNX11-208ENST00000581298 SNAPC4Q5SXM2 1469 aa12.66□□□□□ -0.38
SNX11-208ENST00000581298 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
SNX11-208ENST00000581298 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
SNX11-208ENST00000581298 SYNJ1O43426 1573 aa12.64□□□□□ -0.39
SNX11-208ENST00000581298 ARAP1Q96P48 1450 aa12.62□□□□□ -0.39
SNX11-208ENST00000581298 CHMP7Q8WUX9 453 aaPredicted RBP12.61□□□□□ -0.39
SNX11-208ENST00000581298 CHD1O14646 1710 aa12.61□□□□□ -0.39
SNX11-208ENST00000581298 CLASP1Q7Z460 1538 aa12.59□□□□□ -0.39
SNX11-208ENST00000581298 FBLN2P98095 1184 aa12.59□□□□□ -0.39
SNX11-208ENST00000581298 MSH5O43196 834 aa12.58□□□□□ -0.4
SNX11-208ENST00000581298 ERICH3Q5RHP9 1530 aa12.57□□□□□ -0.4
SNX11-208ENST00000581298 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
SNX11-208ENST00000581298 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
SNX11-208ENST00000581298 NUP160Q12769 1436 aa12.54□□□□□ -0.4
SNX11-208ENST00000581298 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms