RNA–Protein interactions for RNA: ENST00000581140.5

GDPD1-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene GDPD1, Length 1,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD1-205ENST00000581140 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
GDPD1-205ENST00000581140 AEBP2Q6ZN18 517 aaPredicted RBP28.97■■■□□ 2.23
GDPD1-205ENST00000581140 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
GDPD1-205ENST00000581140 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
GDPD1-205ENST00000581140 ABCC9O60706 1549 aa26.48■■□□□ 1.83
GDPD1-205ENST00000581140 RB1CC1Q8TDY2 1594 aa25.29■■□□□ 1.64
GDPD1-205ENST00000581140 NACADO15069 1562 aa25.14■■□□□ 1.62
GDPD1-205ENST00000581140 DCAF8L2P0C7V8 631 aa25.03■■□□□ 1.6
GDPD1-205ENST00000581140 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
GDPD1-205ENST00000581140 DNAJC5BQ9UF47 199 aa24.7■■□□□ 1.54
GDPD1-205ENST00000581140 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
GDPD1-205ENST00000581140 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
GDPD1-205ENST00000581140 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
GDPD1-205ENST00000581140 ZCCHC6Q5VYS8 1495 aaKnown RBP24.6■■□□□ 1.53
GDPD1-205ENST00000581140 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
GDPD1-205ENST00000581140 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
GDPD1-205ENST00000581140 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
GDPD1-205ENST00000581140 SHROOM4Q9ULL8 1493 aa24.24■■□□□ 1.47
GDPD1-205ENST00000581140 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
GDPD1-205ENST00000581140 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
GDPD1-205ENST00000581140 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
GDPD1-205ENST00000581140 CECR2Q9BXF3 1484 aa23.86■■□□□ 1.41
GDPD1-205ENST00000581140 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
GDPD1-205ENST00000581140 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
GDPD1-205ENST00000581140 ATAD2BQ9ULI0 1458 aa23.11■■□□□ 1.29
GDPD1-205ENST00000581140 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
GDPD1-205ENST00000581140 BAZ1AQ9NRL2 1556 aaPredicted RBP23.05■■□□□ 1.28
GDPD1-205ENST00000581140 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
GDPD1-205ENST00000581140 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
GDPD1-205ENST00000581140 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
GDPD1-205ENST00000581140 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
GDPD1-205ENST00000581140 FOXD1Q16676 465 aa22.86■■□□□ 1.25
GDPD1-205ENST00000581140 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
GDPD1-205ENST00000581140 CUX2O14529 1486 aa22.81■■□□□ 1.24
GDPD1-205ENST00000581140 NESP48681 1621 aa22.75■■□□□ 1.23
GDPD1-205ENST00000581140 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
GDPD1-205ENST00000581140 LAMC3Q9Y6N6 1575 aa22.67■■□□□ 1.22
GDPD1-205ENST00000581140 WIZO95785 1651 aa22.58■■□□□ 1.21
GDPD1-205ENST00000581140 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
GDPD1-205ENST00000581140 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
GDPD1-205ENST00000581140 THOC2Q8NI27 1593 aaKnown RBP22.51■■□□□ 1.19
GDPD1-205ENST00000581140 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
GDPD1-205ENST00000581140 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
GDPD1-205ENST00000581140 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
GDPD1-205ENST00000581140 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
GDPD1-205ENST00000581140 TOP2AP11388 1531 aaKnown RBP22.32■■□□□ 1.16
GDPD1-205ENST00000581140 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
GDPD1-205ENST00000581140 WDR62O43379 1518 aa22.25■■□□□ 1.15
GDPD1-205ENST00000581140 CFTRP13569 1480 aa22.24■■□□□ 1.15
GDPD1-205ENST00000581140 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
GDPD1-205ENST00000581140 PRDM2Q13029 1718 aa22.07■■□□□ 1.12
GDPD1-205ENST00000581140 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
GDPD1-205ENST00000581140 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
GDPD1-205ENST00000581140 ABCC8Q09428 1581 aa21.83■■□□□ 1.09
GDPD1-205ENST00000581140 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
GDPD1-205ENST00000581140 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
GDPD1-205ENST00000581140 IFT140Q96RY7 1462 aa21.82■■□□□ 1.08
GDPD1-205ENST00000581140 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
GDPD1-205ENST00000581140 ADRA2BP18089 450 aa21.78■■□□□ 1.08
GDPD1-205ENST00000581140 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
GDPD1-205ENST00000581140 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
GDPD1-205ENST00000581140 TRIM41Q8WV44 630 aa21.72■■□□□ 1.07
GDPD1-205ENST00000581140 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
GDPD1-205ENST00000581140 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
GDPD1-205ENST00000581140 POLA1P09884 1462 aaPredicted RBP21.59■■□□□ 1.05
GDPD1-205ENST00000581140 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
GDPD1-205ENST00000581140 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
GDPD1-205ENST00000581140 SOGA1O94964 1423 aa21.52■■□□□ 1.04
GDPD1-205ENST00000581140 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
GDPD1-205ENST00000581140 FGD5Q6ZNL6 1462 aa21.48■■□□□ 1.03
GDPD1-205ENST00000581140 RIMBP3CA6NJZ7 1639 aa21.47■■□□□ 1.03
GDPD1-205ENST00000581140 RIMBP3BA6NNM3 1639 aa21.47■■□□□ 1.03
GDPD1-205ENST00000581140 RIMBP3Q9UFD9 1639 aa21.47■■□□□ 1.03
GDPD1-205ENST00000581140 CHD1O14646 1710 aa21.46■■□□□ 1.03
GDPD1-205ENST00000581140 CUX1P39880 1505 aa21.46■■□□□ 1.03
GDPD1-205ENST00000581140 PIAS4Q8N2W9 510 aaPredicted RBP21.46■■□□□ 1.03
GDPD1-205ENST00000581140 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
GDPD1-205ENST00000581140 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
GDPD1-205ENST00000581140 FBLN2P98095 1184 aa21.44■■□□□ 1.02
GDPD1-205ENST00000581140 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
GDPD1-205ENST00000581140 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
GDPD1-205ENST00000581140 GRIN2BQ13224 1484 aa21.32■■□□□ 1
GDPD1-205ENST00000581140 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
GDPD1-205ENST00000581140 CHMP7Q8WUX9 453 aaPredicted RBP21.3■■□□□ 1
GDPD1-205ENST00000581140 CYB5RLQ6IPT4 315 aa21.27■■□□□ 1
GDPD1-205ENST00000581140 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
GDPD1-205ENST00000581140 ABCA10Q8WWZ4 1543 aa21.25■□□□□ 0.99
GDPD1-205ENST00000581140 PBRM1Q86U86 1689 aa21.24■□□□□ 0.99
GDPD1-205ENST00000581140 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
GDPD1-205ENST00000581140 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
GDPD1-205ENST00000581140 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
GDPD1-205ENST00000581140 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
GDPD1-205ENST00000581140 ABCA5Q8WWZ7 1642 aa21.2■□□□□ 0.98
GDPD1-205ENST00000581140 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
GDPD1-205ENST00000581140 TOP2BQ02880 1626 aa21.17■□□□□ 0.98
GDPD1-205ENST00000581140 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
GDPD1-205ENST00000581140 MSH5O43196 834 aa21.1■□□□□ 0.97
GDPD1-205ENST00000581140 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
GDPD1-205ENST00000581140 ADAMTS12P58397 1594 aa21.04■□□□□ 0.96
GDPD1-205ENST00000581140 TRHP20396 242 aaPredicted RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms