RNA–Protein interactions for RNA: ENST00000580928.1

RFNG-206, Transcript of RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

TSL 5

Gene RFNG, Length 302 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFNG-206ENST00000580928 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
RFNG-206ENST00000580928 ABCC9O60706 1549 aa23.18■■□□□ 1.3
RFNG-206ENST00000580928 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
RFNG-206ENST00000580928 RB1CC1Q8TDY2 1594 aa21.95■■□□□ 1.11
RFNG-206ENST00000580928 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
RFNG-206ENST00000580928 NACADO15069 1562 aa21.73■■□□□ 1.07
RFNG-206ENST00000580928 DCAF8L2P0C7V8 631 aa21.72■■□□□ 1.07
RFNG-206ENST00000580928 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
RFNG-206ENST00000580928 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
RFNG-206ENST00000580928 MYO15BQ96JP2 1530 aa21.29■■□□□ 1
RFNG-206ENST00000580928 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
RFNG-206ENST00000580928 ZCCHC6Q5VYS8 1495 aaKnown RBP21.02■□□□□ 0.96
RFNG-206ENST00000580928 SHROOM4Q9ULL8 1493 aa20.98■□□□□ 0.95
RFNG-206ENST00000580928 DCAF1Q9Y4B6 1507 aa20.94■□□□□ 0.94
RFNG-206ENST00000580928 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
RFNG-206ENST00000580928 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
RFNG-206ENST00000580928 CC2D2AQ9P2K1 1620 aa20.89■□□□□ 0.93
RFNG-206ENST00000580928 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
RFNG-206ENST00000580928 DNAJC5Q9H3Z4 198 aa20.32■□□□□ 0.84
RFNG-206ENST00000580928 ERCC6Q03468 1493 aa20.1■□□□□ 0.81
RFNG-206ENST00000580928 CUX2O14529 1486 aa20.06■□□□□ 0.8
RFNG-206ENST00000580928 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
RFNG-206ENST00000580928 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
RFNG-206ENST00000580928 SMARCA2P51531 1590 aa19.92■□□□□ 0.78
RFNG-206ENST00000580928 HMGXB3Q12766 1538 aa19.87■□□□□ 0.77
RFNG-206ENST00000580928 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
RFNG-206ENST00000580928 NESP48681 1621 aa19.8■□□□□ 0.76
RFNG-206ENST00000580928 BAZ1BQ9UIG0 1483 aaKnown RBP19.8■□□□□ 0.76
RFNG-206ENST00000580928 BAZ1AQ9NRL2 1556 aaPredicted RBP19.77■□□□□ 0.76
RFNG-206ENST00000580928 LAMC3Q9Y6N6 1575 aa19.65■□□□□ 0.74
RFNG-206ENST00000580928 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
RFNG-206ENST00000580928 THOC2Q8NI27 1593 aaKnown RBP19.61■□□□□ 0.73
RFNG-206ENST00000580928 PDS5BQ9NTI5 1447 aa19.59■□□□□ 0.73
RFNG-206ENST00000580928 MROH2BQ7Z745 1585 aa19.56■□□□□ 0.72
RFNG-206ENST00000580928 KIF21AQ7Z4S6 1674 aa19.54■□□□□ 0.72
RFNG-206ENST00000580928 CADPSQ9ULU8 1353 aa19.45■□□□□ 0.7
RFNG-206ENST00000580928 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
RFNG-206ENST00000580928 MRC2Q9UBG0 1479 aa19.41■□□□□ 0.7
RFNG-206ENST00000580928 WIZO95785 1651 aa19.33■□□□□ 0.68
RFNG-206ENST00000580928 WDR62O43379 1518 aa19.32■□□□□ 0.68
RFNG-206ENST00000580928 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
RFNG-206ENST00000580928 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
RFNG-206ENST00000580928 RSF1Q96T23 1441 aaPredicted RBP19.2■□□□□ 0.66
RFNG-206ENST00000580928 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
RFNG-206ENST00000580928 CFTRP13569 1480 aa19.15■□□□□ 0.66
RFNG-206ENST00000580928 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
RFNG-206ENST00000580928 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
RFNG-206ENST00000580928 PRDM2Q13029 1718 aa18.94■□□□□ 0.62
RFNG-206ENST00000580928 IFT140Q96RY7 1462 aa18.91■□□□□ 0.62
RFNG-206ENST00000580928 RIMBP3CA6NJZ7 1639 aa18.87■□□□□ 0.61
RFNG-206ENST00000580928 RIMBP3BA6NNM3 1639 aa18.87■□□□□ 0.61
RFNG-206ENST00000580928 RIMBP3Q9UFD9 1639 aa18.87■□□□□ 0.61
RFNG-206ENST00000580928 ZNF608Q9ULD9 1512 aaPredicted RBP18.86■□□□□ 0.61
RFNG-206ENST00000580928 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
RFNG-206ENST00000580928 TOPBP1Q92547 1522 aa18.83■□□□□ 0.6
RFNG-206ENST00000580928 ABCC8Q09428 1581 aa18.82■□□□□ 0.6
RFNG-206ENST00000580928 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
RFNG-206ENST00000580928 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
RFNG-206ENST00000580928 DNMBPQ6XZF7 1577 aa18.74■□□□□ 0.59
RFNG-206ENST00000580928 FBLN2P98095 1184 aa18.74■□□□□ 0.59
RFNG-206ENST00000580928 CYB5RLQ6IPT4 315 aa18.74■□□□□ 0.59
RFNG-206ENST00000580928 AQRO60306 1485 aaKnown RBP eCLIP18.69■□□□□ 0.582e-15■■■□□ 17.9
RFNG-206ENST00000580928 TRHP20396 242 aaPredicted RBP18.68■□□□□ 0.58
RFNG-206ENST00000580928 CHD1O14646 1710 aa18.67■□□□□ 0.58
RFNG-206ENST00000580928 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
RFNG-206ENST00000580928 POLA1P09884 1462 aaPredicted RBP18.61■□□□□ 0.57
RFNG-206ENST00000580928 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
RFNG-206ENST00000580928 SOGA1O94964 1423 aa18.57■□□□□ 0.56
RFNG-206ENST00000580928 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
RFNG-206ENST00000580928 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
RFNG-206ENST00000580928 RAD54L2Q9Y4B4 1467 aa18.56■□□□□ 0.56
RFNG-206ENST00000580928 CHMP7Q8WUX9 453 aaPredicted RBP18.53■□□□□ 0.56
RFNG-206ENST00000580928 SNAPC4Q5SXM2 1469 aa18.5■□□□□ 0.55
RFNG-206ENST00000580928 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
RFNG-206ENST00000580928 WDR97A6NE52 1622 aa18.47■□□□□ 0.55
RFNG-206ENST00000580928 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
RFNG-206ENST00000580928 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
RFNG-206ENST00000580928 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
RFNG-206ENST00000580928 CLASP1Q7Z460 1538 aa18.41■□□□□ 0.54
RFNG-206ENST00000580928 CUX1P39880 1505 aa18.39■□□□□ 0.54
RFNG-206ENST00000580928 SYNJ2O15056 1496 aa18.39■□□□□ 0.53
RFNG-206ENST00000580928 AEBP2Q6ZN18 517 aaPredicted RBP18.35■□□□□ 0.53
RFNG-206ENST00000580928 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.53
RFNG-206ENST00000580928 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
RFNG-206ENST00000580928 ABCA10Q8WWZ4 1543 aa18.24■□□□□ 0.51
RFNG-206ENST00000580928 ABCA5Q8WWZ7 1642 aa18.21■□□□□ 0.51
RFNG-206ENST00000580928 WRNQ14191 1432 aaPredicted RBP eCLIP18.19■□□□□ 0.5
RFNG-206ENST00000580928 GRIN2AQ12879 1464 aa18.18■□□□□ 0.5
RFNG-206ENST00000580928 ADAMTS12P58397 1594 aa18.12■□□□□ 0.49
RFNG-206ENST00000580928 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
RFNG-206ENST00000580928 ERCC6L2Q5T890 1561 aa18.1■□□□□ 0.49
RFNG-206ENST00000580928 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
RFNG-206ENST00000580928 NUP160Q12769 1436 aa18.09■□□□□ 0.49
RFNG-206ENST00000580928 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
RFNG-206ENST00000580928 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
RFNG-206ENST00000580928 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
RFNG-206ENST00000580928 SHROOM2Q13796 1616 aa18.01■□□□□ 0.47
RFNG-206ENST00000580928 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
RFNG-206ENST00000580928 NPM1P06748 294 aaKnown RBP eCLIP17.98■□□□□ 0.47
RFNG-206ENST00000580928 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms