RNA–Protein interactions for RNA: ENST00000580835.2

RN7SL230P-201, Transcript of RNA, 7SL, cytoplasmic 230, pseudogene, humanhuman

BASIC

Gene RN7SL230P, Length 303 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL230P-201ENST00000580835 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
RN7SL230P-201ENST00000580835 ABCC9O60706 1549 aa14.65□□□□□ -0.06
RN7SL230P-201ENST00000580835 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
RN7SL230P-201ENST00000580835 RB1CC1Q8TDY2 1594 aa13.99□□□□□ -0.17
RN7SL230P-201ENST00000580835 NACADO15069 1562 aa13.86□□□□□ -0.19
RN7SL230P-201ENST00000580835 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
RN7SL230P-201ENST00000580835 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
RN7SL230P-201ENST00000580835 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
RN7SL230P-201ENST00000580835 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
RN7SL230P-201ENST00000580835 UNC13AQ9UPW8 1703 aa13.5□□□□□ -0.25
RN7SL230P-201ENST00000580835 SHROOM4Q9ULL8 1493 aa13.46□□□□□ -0.25
RN7SL230P-201ENST00000580835 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
RN7SL230P-201ENST00000580835 DCAF1Q9Y4B6 1507 aa13.37□□□□□ -0.27
RN7SL230P-201ENST00000580835 ZCCHC6Q5VYS8 1495 aaKnown RBP13.3□□□□□ -0.28
RN7SL230P-201ENST00000580835 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
RN7SL230P-201ENST00000580835 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
RN7SL230P-201ENST00000580835 EIF4G1Q04637 1599 aaKnown RBP13.19□□□□□ -0.3
RN7SL230P-201ENST00000580835 SCRIBQ14160 1630 aa13.18□□□□□ -0.3
RN7SL230P-201ENST00000580835 DNAJC5Q9H3Z4 198 aa12.94□□□□□ -0.34
RN7SL230P-201ENST00000580835 CUX2O14529 1486 aa12.8□□□□□ -0.36
RN7SL230P-201ENST00000580835 ERCC6Q03468 1493 aa12.77□□□□□ -0.37
RN7SL230P-201ENST00000580835 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
RN7SL230P-201ENST00000580835 SMARCA2P51531 1590 aa12.69□□□□□ -0.38
RN7SL230P-201ENST00000580835 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
RN7SL230P-201ENST00000580835 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.38
RN7SL230P-201ENST00000580835 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
RN7SL230P-201ENST00000580835 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
RN7SL230P-201ENST00000580835 BAZ1BQ9UIG0 1483 aaKnown RBP12.57□□□□□ -0.4
RN7SL230P-201ENST00000580835 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.4
RN7SL230P-201ENST00000580835 PEG3Q9GZU2 1588 aa12.51□□□□□ -0.41
RN7SL230P-201ENST00000580835 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
RN7SL230P-201ENST00000580835 NESP48681 1621 aa12.48□□□□□ -0.41
RN7SL230P-201ENST00000580835 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
RN7SL230P-201ENST00000580835 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
RN7SL230P-201ENST00000580835 KIF21AQ7Z4S6 1674 aa12.35□□□□□ -0.43
RN7SL230P-201ENST00000580835 MROH2BQ7Z745 1585 aa12.35□□□□□ -0.43
RN7SL230P-201ENST00000580835 MRC2Q9UBG0 1479 aa12.33□□□□□ -0.44
RN7SL230P-201ENST00000580835 WDR62O43379 1518 aa12.28□□□□□ -0.44
RN7SL230P-201ENST00000580835 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
RN7SL230P-201ENST00000580835 CEP164Q9UPV0 1460 aa12.27□□□□□ -0.45
RN7SL230P-201ENST00000580835 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
RN7SL230P-201ENST00000580835 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.46
RN7SL230P-201ENST00000580835 WIZO95785 1651 aa12.19□□□□□ -0.46
RN7SL230P-201ENST00000580835 CFTRP13569 1480 aa12.18□□□□□ -0.46
RN7SL230P-201ENST00000580835 TOP2AP11388 1531 aaKnown RBP12.1□□□□□ -0.47
RN7SL230P-201ENST00000580835 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
RN7SL230P-201ENST00000580835 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
RN7SL230P-201ENST00000580835 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
RN7SL230P-201ENST00000580835 IFT140Q96RY7 1462 aa12.03□□□□□ -0.48
RN7SL230P-201ENST00000580835 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
RN7SL230P-201ENST00000580835 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
RN7SL230P-201ENST00000580835 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
RN7SL230P-201ENST00000580835 TOPBP1Q92547 1522 aa11.93□□□□□ -0.5
RN7SL230P-201ENST00000580835 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
RN7SL230P-201ENST00000580835 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
RN7SL230P-201ENST00000580835 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
RN7SL230P-201ENST00000580835 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
RN7SL230P-201ENST00000580835 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
RN7SL230P-201ENST00000580835 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
RN7SL230P-201ENST00000580835 FBLN2P98095 1184 aa11.85□□□□□ -0.51
RN7SL230P-201ENST00000580835 WDR97A6NE52 1622 aa11.82□□□□□ -0.52
RN7SL230P-201ENST00000580835 TARBP1Q13395 1621 aaKnown RBP11.81□□□□□ -0.52
RN7SL230P-201ENST00000580835 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
RN7SL230P-201ENST00000580835 CHD1O14646 1710 aa11.8□□□□□ -0.52
RN7SL230P-201ENST00000580835 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
RN7SL230P-201ENST00000580835 SOGA1O94964 1423 aa11.78□□□□□ -0.52
RN7SL230P-201ENST00000580835 CHMP7Q8WUX9 453 aaPredicted RBP11.77□□□□□ -0.53
RN7SL230P-201ENST00000580835 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
RN7SL230P-201ENST00000580835 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
RN7SL230P-201ENST00000580835 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
RN7SL230P-201ENST00000580835 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
RN7SL230P-201ENST00000580835 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
RN7SL230P-201ENST00000580835 SNAPC4Q5SXM2 1469 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
RN7SL230P-201ENST00000580835 CLASP1Q7Z460 1538 aa11.67□□□□□ -0.54
RN7SL230P-201ENST00000580835 GAPVD1Q14C86 1478 aa11.63□□□□□ -0.55
RN7SL230P-201ENST00000580835 CUX1P39880 1505 aa11.62□□□□□ -0.55
RN7SL230P-201ENST00000580835 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
RN7SL230P-201ENST00000580835 ABCA10Q8WWZ4 1543 aa11.59□□□□□ -0.55
RN7SL230P-201ENST00000580835 WRNQ14191 1432 aaPredicted RBP eCLIP11.57□□□□□ -0.56
RN7SL230P-201ENST00000580835 ABCA5Q8WWZ7 1642 aa11.54□□□□□ -0.56
RN7SL230P-201ENST00000580835 GRIN2AQ12879 1464 aa11.54□□□□□ -0.56
RN7SL230P-201ENST00000580835 FHAD1B1AJZ9 1412 aa11.51□□□□□ -0.57
RN7SL230P-201ENST00000580835 NUP160Q12769 1436 aa11.5□□□□□ -0.57
RN7SL230P-201ENST00000580835 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
RN7SL230P-201ENST00000580835 ERICH3Q5RHP9 1530 aa11.48□□□□□ -0.57
RN7SL230P-201ENST00000580835 ADAMTS12P58397 1594 aa11.47□□□□□ -0.57
RN7SL230P-201ENST00000580835 CEP170Q5SW79 1584 aa11.47□□□□□ -0.57
RN7SL230P-201ENST00000580835 TOP2BQ02880 1626 aa11.45□□□□□ -0.58
RN7SL230P-201ENST00000580835 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
RN7SL230P-201ENST00000580835 BIVM-ERCC5R4GMW8 1640 aa11.44□□□□□ -0.58
RN7SL230P-201ENST00000580835 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
RN7SL230P-201ENST00000580835 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
RN7SL230P-201ENST00000580835 PRG4Q92954 1404 aaPredicted RBP11.41□□□□□ -0.58
RN7SL230P-201ENST00000580835 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms