RNA–Protein interactions for RNA: ENST00000580683.1

GREB1L-208, Transcript of GREB1 like retinoic acid receptor coactivator, humanhuman

TSL 3

Gene GREB1L, Length 444 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1L-208ENST00000580683 NISCHQ9Y2I1 1504 aa14.51□□□□□ -0.09
GREB1L-208ENST00000580683 AEBP2Q6ZN18 517 aaPredicted RBP14.41□□□□□ -0.1
GREB1L-208ENST00000580683 CHIC1Q5VXU3 224 aa14.22□□□□□ -0.13
GREB1L-208ENST00000580683 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
GREB1L-208ENST00000580683 ABCC9O60706 1549 aa12.97□□□□□ -0.33
GREB1L-208ENST00000580683 PHF23Q9BUL5 403 aaPredicted RBP12.54□□□□□ -0.4
GREB1L-208ENST00000580683 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
GREB1L-208ENST00000580683 NACADO15069 1562 aa12.28□□□□□ -0.44
GREB1L-208ENST00000580683 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
GREB1L-208ENST00000580683 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
GREB1L-208ENST00000580683 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
GREB1L-208ENST00000580683 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
GREB1L-208ENST00000580683 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
GREB1L-208ENST00000580683 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
GREB1L-208ENST00000580683 UNC13AQ9UPW8 1703 aa12.01□□□□□ -0.49
GREB1L-208ENST00000580683 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
GREB1L-208ENST00000580683 BICRAQ9NZM4 1560 aa11.96□□□□□ -0.5
GREB1L-208ENST00000580683 SCRIBQ14160 1630 aa11.89□□□□□ -0.51
GREB1L-208ENST00000580683 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
GREB1L-208ENST00000580683 EIF4G1Q04637 1599 aaKnown RBP11.71□□□□□ -0.54
GREB1L-208ENST00000580683 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
GREB1L-208ENST00000580683 CECR2Q9BXF3 1484 aa11.69□□□□□ -0.54
GREB1L-208ENST00000580683 PLPPR3Q6T4P5 718 aa11.63□□□□□ -0.55
GREB1L-208ENST00000580683 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
GREB1L-208ENST00000580683 SMARCA4P51532 1647 aa11.32□□□□□ -0.6
GREB1L-208ENST00000580683 FOXD1Q16676 465 aa11.31□□□□□ -0.6
GREB1L-208ENST00000580683 ATAD2BQ9ULI0 1458 aa11.31□□□□□ -0.6
GREB1L-208ENST00000580683 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
GREB1L-208ENST00000580683 BAZ1AQ9NRL2 1556 aaPredicted RBP11.29□□□□□ -0.6
GREB1L-208ENST00000580683 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
GREB1L-208ENST00000580683 ERCC6Q03468 1493 aa11.24□□□□□ -0.61
GREB1L-208ENST00000580683 BAZ1BQ9UIG0 1483 aaKnown RBP11.24□□□□□ -0.61
GREB1L-208ENST00000580683 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
GREB1L-208ENST00000580683 MROH2BQ7Z745 1585 aa11.18□□□□□ -0.62
GREB1L-208ENST00000580683 CUX2O14529 1486 aa11.16□□□□□ -0.62
GREB1L-208ENST00000580683 NESP48681 1621 aa11.14□□□□□ -0.63
GREB1L-208ENST00000580683 LAMC3Q9Y6N6 1575 aa11.08□□□□□ -0.64
GREB1L-208ENST00000580683 WIZO95785 1651 aa11.04□□□□□ -0.64
GREB1L-208ENST00000580683 ADRA2BP18089 450 aa11.04□□□□□ -0.64
GREB1L-208ENST00000580683 PPP6R1Q9UPN7 881 aa11.04□□□□□ -0.64
GREB1L-208ENST00000580683 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
GREB1L-208ENST00000580683 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
GREB1L-208ENST00000580683 THOC2Q8NI27 1593 aaKnown RBP11.03□□□□□ -0.64
GREB1L-208ENST00000580683 CADPSQ9ULU8 1353 aa11□□□□□ -0.65
GREB1L-208ENST00000580683 KIF21AQ7Z4S6 1674 aa10.99□□□□□ -0.65
GREB1L-208ENST00000580683 RSF1Q96T23 1441 aaPredicted RBP10.97□□□□□ -0.65
GREB1L-208ENST00000580683 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
GREB1L-208ENST00000580683 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
GREB1L-208ENST00000580683 CEP164Q9UPV0 1460 aa10.92□□□□□ -0.66
GREB1L-208ENST00000580683 WDR62O43379 1518 aa10.89□□□□□ -0.67
GREB1L-208ENST00000580683 FANCD2Q9BXW9 1451 aa10.89□□□□□ -0.67
GREB1L-208ENST00000580683 CFTRP13569 1480 aa10.88□□□□□ -0.67
GREB1L-208ENST00000580683 CCDC88BA6NC98 1476 aa10.79□□□□□ -0.68
GREB1L-208ENST00000580683 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
GREB1L-208ENST00000580683 PRDM2Q13029 1718 aa10.75□□□□□ -0.69
GREB1L-208ENST00000580683 PIAS4Q8N2W9 510 aaPredicted RBP10.69□□□□□ -0.7
GREB1L-208ENST00000580683 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
GREB1L-208ENST00000580683 IFT140Q96RY7 1462 aa10.68□□□□□ -0.7
GREB1L-208ENST00000580683 ABCC8Q09428 1581 aa10.66□□□□□ -0.7
GREB1L-208ENST00000580683 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.7
GREB1L-208ENST00000580683 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
GREB1L-208ENST00000580683 TRIM41Q8WV44 630 aa10.64□□□□□ -0.71
GREB1L-208ENST00000580683 OSCARQ8IYS5 282 aa10.63□□□□□ -0.71
GREB1L-208ENST00000580683 EIF4G3O43432 1585 aaKnown RBP10.61□□□□□ -0.71
GREB1L-208ENST00000580683 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
GREB1L-208ENST00000580683 TARBP1Q13395 1621 aaKnown RBP10.55□□□□□ -0.72
GREB1L-208ENST00000580683 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
GREB1L-208ENST00000580683 AQRO60306 1485 aaKnown RBP eCLIP10.55□□□□□ -0.72
GREB1L-208ENST00000580683 FGD5Q6ZNL6 1462 aa10.53□□□□□ -0.72
GREB1L-208ENST00000580683 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
GREB1L-208ENST00000580683 SOGA1O94964 1423 aa10.52□□□□□ -0.73
GREB1L-208ENST00000580683 CUX1P39880 1505 aa10.51□□□□□ -0.73
GREB1L-208ENST00000580683 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
GREB1L-208ENST00000580683 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
GREB1L-208ENST00000580683 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
GREB1L-208ENST00000580683 TDRD9Q8NDG6 1382 aaKnown RBP10.5□□□□□ -0.73
GREB1L-208ENST00000580683 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
GREB1L-208ENST00000580683 WDR97A6NE52 1622 aa10.49□□□□□ -0.73
GREB1L-208ENST00000580683 FBLN2P98095 1184 aa10.49□□□□□ -0.73
GREB1L-208ENST00000580683 CHD1O14646 1710 aa10.48□□□□□ -0.73
GREB1L-208ENST00000580683 SNAPC4Q5SXM2 1469 aa10.48□□□□□ -0.73
GREB1L-208ENST00000580683 GRIN2BQ13224 1484 aa10.44□□□□□ -0.74
GREB1L-208ENST00000580683 MAGI1Q96QZ7 1491 aaPredicted RBP10.43□□□□□ -0.74
GREB1L-208ENST00000580683 CHMP7Q8WUX9 453 aaPredicted RBP10.41□□□□□ -0.74
GREB1L-208ENST00000580683 SYNJ2O15056 1496 aa10.41□□□□□ -0.74
GREB1L-208ENST00000580683 GAPVD1Q14C86 1478 aa10.41□□□□□ -0.74
GREB1L-208ENST00000580683 SYNJ1O43426 1573 aa10.4□□□□□ -0.74
GREB1L-208ENST00000580683 ABCA10Q8WWZ4 1543 aa10.39□□□□□ -0.75
GREB1L-208ENST00000580683 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
GREB1L-208ENST00000580683 ARAP1Q96P48 1450 aa10.38□□□□□ -0.75
GREB1L-208ENST00000580683 ABCA5Q8WWZ7 1642 aa10.38□□□□□ -0.75
GREB1L-208ENST00000580683 CYB5RLQ6IPT4 315 aa10.38□□□□□ -0.75
GREB1L-208ENST00000580683 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
GREB1L-208ENST00000580683 CLASP1Q7Z460 1538 aa10.38□□□□□ -0.75
GREB1L-208ENST00000580683 TOP2BQ02880 1626 aa10.36□□□□□ -0.75
GREB1L-208ENST00000580683 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
GREB1L-208ENST00000580683 MSH5O43196 834 aa10.34□□□□□ -0.75
GREB1L-208ENST00000580683 ADAMTS12P58397 1594 aa10.32□□□□□ -0.76
GREB1L-208ENST00000580683 GRIN2AQ12879 1464 aa10.31□□□□□ -0.76
GREB1L-208ENST00000580683 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms