RNA–Protein interactions for RNA: ENST00000580444.2

RNF135-206, Transcript of ring finger protein 135, humanhuman

TSL 5

Gene RNF135, Length 475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-206ENST00000580444 NISCHQ9Y2I1 1504 aa40.25■■■■■ 4.03
RNF135-206ENST00000580444 CCDC180Q9P1Z9 1646 aa35.78■■■■□ 3.32
RNF135-206ENST00000580444 ABCC9O60706 1549 aa34.96■■■■□ 3.19
RNF135-206ENST00000580444 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
RNF135-206ENST00000580444 NACADO15069 1562 aa33.63■■■□□ 2.97
RNF135-206ENST00000580444 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
RNF135-206ENST00000580444 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
RNF135-206ENST00000580444 MYO15BQ96JP2 1530 aa33.43■■■□□ 2.94
RNF135-206ENST00000580444 DCAF1Q9Y4B6 1507 aa33.31■■■□□ 2.92
RNF135-206ENST00000580444 UNC13AQ9UPW8 1703 aa32.86■■■□□ 2.85
RNF135-206ENST00000580444 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
RNF135-206ENST00000580444 SCRIBQ14160 1630 aa32.65■■■□□ 2.82
RNF135-206ENST00000580444 BICRAQ9NZM4 1560 aa32.61■■■□□ 2.81
RNF135-206ENST00000580444 SHROOM4Q9ULL8 1493 aa32.31■■■□□ 2.76
RNF135-206ENST00000580444 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
RNF135-206ENST00000580444 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
RNF135-206ENST00000580444 CC2D2AQ9P2K1 1620 aa31.61■■■□□ 2.65
RNF135-206ENST00000580444 CECR2Q9BXF3 1484 aa31.41■■■□□ 2.62
RNF135-206ENST00000580444 SMARCA4P51532 1647 aa31.23■■■□□ 2.59
RNF135-206ENST00000580444 BAZ1AQ9NRL2 1556 aaPredicted RBP31.21■■■□□ 2.59
RNF135-206ENST00000580444 ATAD2BQ9ULI0 1458 aa31.04■■■□□ 2.56
RNF135-206ENST00000580444 SMARCA2P51531 1590 aa31.03■■■□□ 2.56
RNF135-206ENST00000580444 NCAPD3P42695 1498 aa31.01■■■□□ 2.56
RNF135-206ENST00000580444 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
RNF135-206ENST00000580444 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
RNF135-206ENST00000580444 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
RNF135-206ENST00000580444 BAZ1BQ9UIG0 1483 aaKnown RBP30.81■■■□□ 2.52
RNF135-206ENST00000580444 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
RNF135-206ENST00000580444 WIZO95785 1651 aa30.67■■■□□ 2.5
RNF135-206ENST00000580444 TOP2AP11388 1531 aaKnown RBP30.38■■■□□ 2.45
RNF135-206ENST00000580444 NESP48681 1621 aa30.25■■■□□ 2.43
RNF135-206ENST00000580444 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.43
RNF135-206ENST00000580444 ERCC6Q03468 1493 aa30.16■■■□□ 2.42
RNF135-206ENST00000580444 CADPSQ9ULU8 1353 aa30.12■■■□□ 2.41
RNF135-206ENST00000580444 PDS5BQ9NTI5 1447 aa30.01■■■□□ 2.39
RNF135-206ENST00000580444 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
RNF135-206ENST00000580444 CFTRP13569 1480 aa29.94■■■□□ 2.38
RNF135-206ENST00000580444 SUPT5HO00267 1087 aaKnown RBP29.94■■■□□ 2.38
RNF135-206ENST00000580444 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
RNF135-206ENST00000580444 CUX2O14529 1486 aa29.8■■■□□ 2.36
RNF135-206ENST00000580444 THOC2Q8NI27 1593 aaKnown RBP29.79■■■□□ 2.36
RNF135-206ENST00000580444 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
RNF135-206ENST00000580444 CEP164Q9UPV0 1460 aa29.75■■■□□ 2.35
RNF135-206ENST00000580444 PRDM2Q13029 1718 aa29.74■■■□□ 2.35
RNF135-206ENST00000580444 MRC2Q9UBG0 1479 aa29.7■■■□□ 2.35
RNF135-206ENST00000580444 WDR62O43379 1518 aa29.58■■■□□ 2.33
RNF135-206ENST00000580444 URB2Q14146 1524 aaKnown RBP29.46■■■□□ 2.31
RNF135-206ENST00000580444 ABCC8Q09428 1581 aa29.32■■■□□ 2.28
RNF135-206ENST00000580444 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
RNF135-206ENST00000580444 DNMBPQ6XZF7 1577 aa29.29■■■□□ 2.28
RNF135-206ENST00000580444 IFT140Q96RY7 1462 aa29.12■■■□□ 2.25
RNF135-206ENST00000580444 CUX1P39880 1505 aa29.1■■■□□ 2.25
RNF135-206ENST00000580444 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
RNF135-206ENST00000580444 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
RNF135-206ENST00000580444 TARBP1Q13395 1621 aaKnown RBP28.98■■■□□ 2.23
RNF135-206ENST00000580444 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
RNF135-206ENST00000580444 SOGA1O94964 1423 aa28.94■■■□□ 2.22
RNF135-206ENST00000580444 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
RNF135-206ENST00000580444 RAD54L2Q9Y4B4 1467 aa28.92■■■□□ 2.22
RNF135-206ENST00000580444 EIF4G3O43432 1585 aaKnown RBP28.87■■■□□ 2.21
RNF135-206ENST00000580444 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
RNF135-206ENST00000580444 BIVM-ERCC5R4GMW8 1640 aa28.86■■■□□ 2.21
RNF135-206ENST00000580444 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
RNF135-206ENST00000580444 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.2
RNF135-206ENST00000580444 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
RNF135-206ENST00000580444 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
RNF135-206ENST00000580444 TDRD9Q8NDG6 1382 aaKnown RBP28.76■■■□□ 2.2
RNF135-206ENST00000580444 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
RNF135-206ENST00000580444 GRIN2BQ13224 1484 aa28.61■■■□□ 2.17
RNF135-206ENST00000580444 GAPVD1Q14C86 1478 aa28.61■■■□□ 2.17
RNF135-206ENST00000580444 ABCA5Q8WWZ7 1642 aa28.6■■■□□ 2.17
RNF135-206ENST00000580444 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
RNF135-206ENST00000580444 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
RNF135-206ENST00000580444 PBRM1Q86U86 1689 aa28.54■■■□□ 2.16
RNF135-206ENST00000580444 MAGI1Q96QZ7 1491 aaPredicted RBP28.54■■■□□ 2.16
RNF135-206ENST00000580444 CHD1O14646 1710 aa28.49■■■□□ 2.15
RNF135-206ENST00000580444 FBLN2P98095 1184 aa28.48■■■□□ 2.15
RNF135-206ENST00000580444 SYNJ2O15056 1496 aa28.41■■■□□ 2.14
RNF135-206ENST00000580444 CHMP7Q8WUX9 453 aaPredicted RBP28.41■■■□□ 2.14
RNF135-206ENST00000580444 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
RNF135-206ENST00000580444 KIF27Q86VH2 1401 aa28.35■■■□□ 2.13
RNF135-206ENST00000580444 ADAMTS12P58397 1594 aa28.33■■■□□ 2.13
RNF135-206ENST00000580444 FHAD1B1AJZ9 1412 aa28.29■■■□□ 2.12
RNF135-206ENST00000580444 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
RNF135-206ENST00000580444 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
RNF135-206ENST00000580444 IGF1RP08069 1367 aa28.19■■■□□ 2.1
RNF135-206ENST00000580444 CLASP1Q7Z460 1538 aa28.18■■■□□ 2.1
RNF135-206ENST00000580444 CUL7Q14999 1698 aa28.14■■■□□ 2.1
RNF135-206ENST00000580444 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
RNF135-206ENST00000580444 NUP160Q12769 1436 aa28.1■■■□□ 2.09
RNF135-206ENST00000580444 RIMBP3CA6NJZ7 1639 aa28.1■■■□□ 2.09
RNF135-206ENST00000580444 RIMBP3BA6NNM3 1639 aa28.1■■■□□ 2.09
RNF135-206ENST00000580444 RIMBP3Q9UFD9 1639 aa28.1■■■□□ 2.09
RNF135-206ENST00000580444 CEP170Q5SW79 1584 aa28.08■■■□□ 2.09
RNF135-206ENST00000580444 RUSC2Q8N2Y8 1516 aa28.05■■■□□ 2.08
RNF135-206ENST00000580444 CARMIL1Q5VZK9 1371 aa28.04■■■□□ 2.08
RNF135-206ENST00000580444 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
RNF135-206ENST00000580444 ARAP1Q96P48 1450 aa27.89■■■□□ 2.05
RNF135-206ENST00000580444 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.05
RNF135-206ENST00000580444 SHROOM2Q13796 1616 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 229.6 ms