RNA–Protein interactions for RNA: ENST00000579852.1

CSF3-207, Transcript of colony stimulating factor 3, humanhuman

TSL 5

Gene CSF3, Length 1,288 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3-207ENST00000579852 NISCHQ9Y2I1 1504 aa38.29■■■■□ 3.72
CSF3-207ENST00000579852 CCDC180Q9P1Z9 1646 aa34.21■■■■□ 3.07
CSF3-207ENST00000579852 ABCC9O60706 1549 aa33.22■■■□□ 2.91
CSF3-207ENST00000579852 AEBP2Q6ZN18 517 aaPredicted RBP32.29■■■□□ 2.76
CSF3-207ENST00000579852 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
CSF3-207ENST00000579852 NACADO15069 1562 aa32■■■□□ 2.71
CSF3-207ENST00000579852 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
CSF3-207ENST00000579852 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
CSF3-207ENST00000579852 MYO15BQ96JP2 1530 aa31.77■■■□□ 2.68
CSF3-207ENST00000579852 DCAF1Q9Y4B6 1507 aa31.69■■■□□ 2.66
CSF3-207ENST00000579852 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
CSF3-207ENST00000579852 SCRIBQ14160 1630 aa31.19■■■□□ 2.58
CSF3-207ENST00000579852 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
CSF3-207ENST00000579852 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
CSF3-207ENST00000579852 CHIC1Q5VXU3 224 aa30.88■■■□□ 2.53
CSF3-207ENST00000579852 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
CSF3-207ENST00000579852 EIF4G1Q04637 1599 aaKnown RBP30.24■■■□□ 2.43
CSF3-207ENST00000579852 DNAJC5BQ9UF47 199 aa30.2■■■□□ 2.43
CSF3-207ENST00000579852 CC2D2AQ9P2K1 1620 aa30.12■■■□□ 2.41
CSF3-207ENST00000579852 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
CSF3-207ENST00000579852 SMARCA4P51532 1647 aa29.81■■■□□ 2.36
CSF3-207ENST00000579852 BAZ1AQ9NRL2 1556 aaPredicted RBP29.74■■■□□ 2.35
CSF3-207ENST00000579852 SMARCA2P51531 1590 aa29.55■■■□□ 2.32
CSF3-207ENST00000579852 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
CSF3-207ENST00000579852 ATAD2BQ9ULI0 1458 aa29.48■■■□□ 2.31
CSF3-207ENST00000579852 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
CSF3-207ENST00000579852 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
CSF3-207ENST00000579852 NCAPD3P42695 1498 aa29.41■■■□□ 2.3
CSF3-207ENST00000579852 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
CSF3-207ENST00000579852 WIZO95785 1651 aa29.32■■■□□ 2.28
CSF3-207ENST00000579852 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
CSF3-207ENST00000579852 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
CSF3-207ENST00000579852 LAMC3Q9Y6N6 1575 aa28.78■■■□□ 2.2
CSF3-207ENST00000579852 NESP48681 1621 aa28.76■■■□□ 2.2
CSF3-207ENST00000579852 ERCC6Q03468 1493 aa28.67■■■□□ 2.18
CSF3-207ENST00000579852 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
CSF3-207ENST00000579852 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
CSF3-207ENST00000579852 CADPSQ9ULU8 1353 aa28.54■■■□□ 2.16
CSF3-207ENST00000579852 CCDC88BA6NC98 1476 aa28.53■■■□□ 2.16
CSF3-207ENST00000579852 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
CSF3-207ENST00000579852 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
CSF3-207ENST00000579852 CFTRP13569 1480 aa28.44■■■□□ 2.14
CSF3-207ENST00000579852 THOC2Q8NI27 1593 aaKnown RBP28.43■■■□□ 2.14
CSF3-207ENST00000579852 FANCD2Q9BXW9 1451 aa28.32■■■□□ 2.12
CSF3-207ENST00000579852 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
CSF3-207ENST00000579852 CUX2O14529 1486 aa28.3■■■□□ 2.12
CSF3-207ENST00000579852 MRC2Q9UBG0 1479 aa28.23■■■□□ 2.11
CSF3-207ENST00000579852 WDR62O43379 1518 aa28.17■■■□□ 2.1
CSF3-207ENST00000579852 URB2Q14146 1524 aaKnown RBP28.03■■■□□ 2.08
CSF3-207ENST00000579852 DNMBPQ6XZF7 1577 aa27.93■■■□□ 2.06
CSF3-207ENST00000579852 TOPBP1Q92547 1522 aa27.89■■■□□ 2.06
CSF3-207ENST00000579852 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
CSF3-207ENST00000579852 CUX1P39880 1505 aa27.72■■■□□ 2.03
CSF3-207ENST00000579852 IFT140Q96RY7 1462 aa27.67■■■□□ 2.02
CSF3-207ENST00000579852 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
CSF3-207ENST00000579852 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
CSF3-207ENST00000579852 BIVM-ERCC5R4GMW8 1640 aa27.62■■■□□ 2.01
CSF3-207ENST00000579852 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
CSF3-207ENST00000579852 EIF4G3O43432 1585 aaKnown RBP27.59■■■□□ 2.01
CSF3-207ENST00000579852 SENP3Q9H4L4 574 aaPredicted RBP27.57■■■□□ 2
CSF3-207ENST00000579852 SYNJ1O43426 1573 aa27.56■■■□□ 2
CSF3-207ENST00000579852 TOP2BQ02880 1626 aa27.56■■■□□ 2
CSF3-207ENST00000579852 WDR97A6NE52 1622 aa27.55■■■□□ 2
CSF3-207ENST00000579852 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
CSF3-207ENST00000579852 WRNQ14191 1432 aaPredicted RBP eCLIP27.53■■■□□ 2
CSF3-207ENST00000579852 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
CSF3-207ENST00000579852 SOGA1O94964 1423 aa27.46■■□□□ 1.99
CSF3-207ENST00000579852 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
CSF3-207ENST00000579852 AQRO60306 1485 aaKnown RBP eCLIP27.34■■□□□ 1.97
CSF3-207ENST00000579852 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
CSF3-207ENST00000579852 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
CSF3-207ENST00000579852 CHD1O14646 1710 aa27.3■■□□□ 1.96
CSF3-207ENST00000579852 TDRD9Q8NDG6 1382 aaKnown RBP27.28■■□□□ 1.96
CSF3-207ENST00000579852 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
CSF3-207ENST00000579852 GAPVD1Q14C86 1478 aa27.2■■□□□ 1.95
CSF3-207ENST00000579852 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
CSF3-207ENST00000579852 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
CSF3-207ENST00000579852 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
CSF3-207ENST00000579852 DNAJC5Q9H3Z4 198 aa27.14■■□□□ 1.94
CSF3-207ENST00000579852 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
CSF3-207ENST00000579852 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
CSF3-207ENST00000579852 SYNJ2O15056 1496 aa27.01■■□□□ 1.91
CSF3-207ENST00000579852 FBLN2P98095 1184 aa26.99■■□□□ 1.91
CSF3-207ENST00000579852 OSCARQ8IYS5 282 aa26.99■■□□□ 1.91
CSF3-207ENST00000579852 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
CSF3-207ENST00000579852 CUL7Q14999 1698 aa26.92■■□□□ 1.9
CSF3-207ENST00000579852 CHMP7Q8WUX9 453 aaPredicted RBP26.9■■□□□ 1.9
CSF3-207ENST00000579852 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
CSF3-207ENST00000579852 GRIN2AQ12879 1464 aa26.87■■□□□ 1.89
CSF3-207ENST00000579852 TRIM41Q8WV44 630 aa26.85■■□□□ 1.89
CSF3-207ENST00000579852 CLASP1Q7Z460 1538 aa26.84■■□□□ 1.89
CSF3-207ENST00000579852 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
CSF3-207ENST00000579852 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
CSF3-207ENST00000579852 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
CSF3-207ENST00000579852 CEP170Q5SW79 1584 aa26.79■■□□□ 1.88
CSF3-207ENST00000579852 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
CSF3-207ENST00000579852 IGF1RP08069 1367 aa26.71■■□□□ 1.87
CSF3-207ENST00000579852 RUSC2Q8N2Y8 1516 aa26.7■■□□□ 1.87
CSF3-207ENST00000579852 NUP160Q12769 1436 aa26.69■■□□□ 1.86
CSF3-207ENST00000579852 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms