RNA–Protein interactions for RNA: ENST00000579671.5

NEK8-204, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-204ENST00000579671 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
NEK8-204ENST00000579671 ABCC9O60706 1549 aa15.17■□□□□ 0.02
NEK8-204ENST00000579671 CCDC180Q9P1Z9 1646 aa14.98□□□□□ -0.01
NEK8-204ENST00000579671 RB1CC1Q8TDY2 1594 aa14.37□□□□□ -0.11
NEK8-204ENST00000579671 DNAJC5BQ9UF47 199 aa14.34□□□□□ -0.11
NEK8-204ENST00000579671 NACADO15069 1562 aa14.25□□□□□ -0.13
NEK8-204ENST00000579671 DCAF8L2P0C7V8 631 aa14.18□□□□□ -0.14
NEK8-204ENST00000579671 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
NEK8-204ENST00000579671 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
NEK8-204ENST00000579671 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
NEK8-204ENST00000579671 BICRAQ9NZM4 1560 aa13.9□□□□□ -0.18
NEK8-204ENST00000579671 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
NEK8-204ENST00000579671 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
NEK8-204ENST00000579671 DCAF1Q9Y4B6 1507 aa13.75□□□□□ -0.21
NEK8-204ENST00000579671 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
NEK8-204ENST00000579671 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
NEK8-204ENST00000579671 SCRIBQ14160 1630 aa13.64□□□□□ -0.23
NEK8-204ENST00000579671 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
NEK8-204ENST00000579671 DNAJC5Q9H3Z4 198 aa13.35□□□□□ -0.27
NEK8-204ENST00000579671 CUX2O14529 1486 aa13.16□□□□□ -0.3
NEK8-204ENST00000579671 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
NEK8-204ENST00000579671 ERCC6Q03468 1493 aa13.16□□□□□ -0.3
NEK8-204ENST00000579671 ATAD2BQ9ULI0 1458 aa13.09□□□□□ -0.31
NEK8-204ENST00000579671 SMARCA2P51531 1590 aa13.06□□□□□ -0.32
NEK8-204ENST00000579671 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
NEK8-204ENST00000579671 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
NEK8-204ENST00000579671 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
NEK8-204ENST00000579671 NESP48681 1621 aa12.95□□□□□ -0.34
NEK8-204ENST00000579671 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
NEK8-204ENST00000579671 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
NEK8-204ENST00000579671 LAMC3Q9Y6N6 1575 aa12.87□□□□□ -0.35
NEK8-204ENST00000579671 PDS5BQ9NTI5 1447 aa12.86□□□□□ -0.35
NEK8-204ENST00000579671 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
NEK8-204ENST00000579671 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
NEK8-204ENST00000579671 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
NEK8-204ENST00000579671 KIF21AQ7Z4S6 1674 aa12.74□□□□□ -0.37
NEK8-204ENST00000579671 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
NEK8-204ENST00000579671 TRIM41Q8WV44 630 aa12.7□□□□□ -0.38
NEK8-204ENST00000579671 WDR62O43379 1518 aa12.67□□□□□ -0.38
NEK8-204ENST00000579671 CEP164Q9UPV0 1460 aa12.64□□□□□ -0.39
NEK8-204ENST00000579671 WIZO95785 1651 aa12.61□□□□□ -0.39
NEK8-204ENST00000579671 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
NEK8-204ENST00000579671 OSCARQ8IYS5 282 aa12.57□□□□□ -0.4
NEK8-204ENST00000579671 CFTRP13569 1480 aa12.57□□□□□ -0.4
NEK8-204ENST00000579671 RSF1Q96T23 1441 aaPredicted RBP12.52□□□□□ -0.41
NEK8-204ENST00000579671 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
NEK8-204ENST00000579671 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
NEK8-204ENST00000579671 IFT140Q96RY7 1462 aa12.4□□□□□ -0.43
NEK8-204ENST00000579671 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
NEK8-204ENST00000579671 ZNF608Q9ULD9 1512 aaPredicted RBP12.35□□□□□ -0.43
NEK8-204ENST00000579671 ABCC8Q09428 1581 aa12.35□□□□□ -0.43
NEK8-204ENST00000579671 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
NEK8-204ENST00000579671 TOPBP1Q92547 1522 aa12.33□□□□□ -0.44
NEK8-204ENST00000579671 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
NEK8-204ENST00000579671 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
NEK8-204ENST00000579671 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
NEK8-204ENST00000579671 ARHGEF11O15085 1522 aa12.31□□□□□ -0.44
NEK8-204ENST00000579671 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.44
NEK8-204ENST00000579671 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.45
NEK8-204ENST00000579671 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
NEK8-204ENST00000579671 FBLN2P98095 1184 aa12.25□□□□□ -0.45
NEK8-204ENST00000579671 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
NEK8-204ENST00000579671 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
NEK8-204ENST00000579671 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
NEK8-204ENST00000579671 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
NEK8-204ENST00000579671 ARAP1Q96P48 1450 aa12.18□□□□□ -0.46
NEK8-204ENST00000579671 SOGA1O94964 1423 aa12.17□□□□□ -0.46
NEK8-204ENST00000579671 CHD1O14646 1710 aa12.17□□□□□ -0.46
NEK8-204ENST00000579671 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
NEK8-204ENST00000579671 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
NEK8-204ENST00000579671 CHMP7Q8WUX9 453 aaPredicted RBP12.14□□□□□ -0.47
NEK8-204ENST00000579671 SNAPC4Q5SXM2 1469 aa12.11□□□□□ -0.47
NEK8-204ENST00000579671 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
NEK8-204ENST00000579671 MAGI1Q96QZ7 1491 aaPredicted RBP12.1□□□□□ -0.47
NEK8-204ENST00000579671 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
NEK8-204ENST00000579671 GRIN2BQ13224 1484 aa12.08□□□□□ -0.47
NEK8-204ENST00000579671 SYNJ1O43426 1573 aa12.08□□□□□ -0.48
NEK8-204ENST00000579671 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
NEK8-204ENST00000579671 SYNJ2O15056 1496 aa12.05□□□□□ -0.48
NEK8-204ENST00000579671 CUX1P39880 1505 aa12.05□□□□□ -0.48
NEK8-204ENST00000579671 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.49
NEK8-204ENST00000579671 AEBP2Q6ZN18 517 aaPredicted RBP11.99□□□□□ -0.49
NEK8-204ENST00000579671 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.49
NEK8-204ENST00000579671 PBRM1Q86U86 1689 aa11.94□□□□□ -0.5
NEK8-204ENST00000579671 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
NEK8-204ENST00000579671 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
NEK8-204ENST00000579671 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
NEK8-204ENST00000579671 NUP160Q12769 1436 aa11.88□□□□□ -0.51
NEK8-204ENST00000579671 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
NEK8-204ENST00000579671 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
NEK8-204ENST00000579671 ADAMTS12P58397 1594 aa11.85□□□□□ -0.51
NEK8-204ENST00000579671 CEP170Q5SW79 1584 aa11.84□□□□□ -0.51
NEK8-204ENST00000579671 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
NEK8-204ENST00000579671 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
NEK8-204ENST00000579671 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
NEK8-204ENST00000579671 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
NEK8-204ENST00000579671 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
NEK8-204ENST00000579671 JPH4Q96JJ6 628 aa11.79□□□□□ -0.52
NEK8-204ENST00000579671 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
NEK8-204ENST00000579671 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms