RNA–Protein interactions for RNA: ENST00000579230.1

KCTD2-204, Transcript of potassium channel tetramerization domain containing 2, humanhuman

TSL 1 (best)

Gene KCTD2, Length 950 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-204ENST00000579230 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
KCTD2-204ENST00000579230 NISCHQ9Y2I1 1504 aa24.28■■□□□ 1.48
KCTD2-204ENST00000579230 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
KCTD2-204ENST00000579230 ABCC9O60706 1549 aa22.12■■□□□ 1.13
KCTD2-204ENST00000579230 CCDC180Q9P1Z9 1646 aa21.96■■□□□ 1.11
KCTD2-204ENST00000579230 SENP3Q9H4L4 574 aaPredicted RBP21.55■■□□□ 1.04
KCTD2-204ENST00000579230 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
KCTD2-204ENST00000579230 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
KCTD2-204ENST00000579230 RB1CC1Q8TDY2 1594 aa20.97■□□□□ 0.95
KCTD2-204ENST00000579230 NACADO15069 1562 aa20.77■□□□□ 0.92
KCTD2-204ENST00000579230 UNC13AQ9UPW8 1703 aa20.65■□□□□ 0.9
KCTD2-204ENST00000579230 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
KCTD2-204ENST00000579230 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
KCTD2-204ENST00000579230 MYO15BQ96JP2 1530 aa20.43■□□□□ 0.86
KCTD2-204ENST00000579230 DCAF8L2P0C7V8 631 aa20.41■□□□□ 0.86
KCTD2-204ENST00000579230 ZCCHC6Q5VYS8 1495 aaKnown RBP20.08■□□□□ 0.81
KCTD2-204ENST00000579230 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
KCTD2-204ENST00000579230 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
KCTD2-204ENST00000579230 CC2D2AQ9P2K1 1620 aa20.03■□□□□ 0.8
KCTD2-204ENST00000579230 FOXD1Q16676 465 aa19.96■□□□□ 0.79
KCTD2-204ENST00000579230 CECR2Q9BXF3 1484 aa19.95■□□□□ 0.78
KCTD2-204ENST00000579230 SCRIBQ14160 1630 aa19.93■□□□□ 0.78
KCTD2-204ENST00000579230 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
KCTD2-204ENST00000579230 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
KCTD2-204ENST00000579230 DNAJC5Q9H3Z4 198 aa19.46■□□□□ 0.71
KCTD2-204ENST00000579230 CUX2O14529 1486 aa19.19■□□□□ 0.66
KCTD2-204ENST00000579230 NCAPD3P42695 1498 aa19.17■□□□□ 0.66
KCTD2-204ENST00000579230 ATAD2BQ9ULI0 1458 aa19.08■□□□□ 0.64
KCTD2-204ENST00000579230 ERCC6Q03468 1493 aa19.06■□□□□ 0.64
KCTD2-204ENST00000579230 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
KCTD2-204ENST00000579230 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
KCTD2-204ENST00000579230 SMARCA2P51531 1590 aa18.99■□□□□ 0.63
KCTD2-204ENST00000579230 NESP48681 1621 aa18.96■□□□□ 0.63
KCTD2-204ENST00000579230 THOC2Q8NI27 1593 aaKnown RBP18.89■□□□□ 0.62
KCTD2-204ENST00000579230 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
KCTD2-204ENST00000579230 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
KCTD2-204ENST00000579230 BAZ1BQ9UIG0 1483 aaKnown RBP18.84■□□□□ 0.61
KCTD2-204ENST00000579230 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
KCTD2-204ENST00000579230 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
KCTD2-204ENST00000579230 KIF21AQ7Z4S6 1674 aa18.78■□□□□ 0.6
KCTD2-204ENST00000579230 ADRA2BP18089 450 aa18.77■□□□□ 0.6
KCTD2-204ENST00000579230 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
KCTD2-204ENST00000579230 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
KCTD2-204ENST00000579230 MSH5O43196 834 aa18.71■□□□□ 0.59
KCTD2-204ENST00000579230 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
KCTD2-204ENST00000579230 WDR62O43379 1518 aa18.53■□□□□ 0.56
KCTD2-204ENST00000579230 CADPSQ9ULU8 1353 aa18.53■□□□□ 0.56
KCTD2-204ENST00000579230 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.55
KCTD2-204ENST00000579230 WIZO95785 1651 aa18.5■□□□□ 0.55
KCTD2-204ENST00000579230 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
KCTD2-204ENST00000579230 CEP164Q9UPV0 1460 aa18.37■□□□□ 0.53
KCTD2-204ENST00000579230 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.53
KCTD2-204ENST00000579230 CFTRP13569 1480 aa18.31■□□□□ 0.52
KCTD2-204ENST00000579230 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
KCTD2-204ENST00000579230 PRDM2Q13029 1718 aa18.22■□□□□ 0.51
KCTD2-204ENST00000579230 TOP2AP11388 1531 aaKnown RBP18.22■□□□□ 0.51
KCTD2-204ENST00000579230 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
KCTD2-204ENST00000579230 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
KCTD2-204ENST00000579230 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
KCTD2-204ENST00000579230 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
KCTD2-204ENST00000579230 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
KCTD2-204ENST00000579230 ZNF608Q9ULD9 1512 aaPredicted RBP18.06■□□□□ 0.48
KCTD2-204ENST00000579230 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
KCTD2-204ENST00000579230 ARHGEF11O15085 1522 aa17.99■□□□□ 0.47
KCTD2-204ENST00000579230 TOPBP1Q92547 1522 aa17.99■□□□□ 0.47
KCTD2-204ENST00000579230 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
KCTD2-204ENST00000579230 EIF4G3O43432 1585 aaKnown RBP17.97■□□□□ 0.47
KCTD2-204ENST00000579230 CHD1O14646 1710 aa17.92■□□□□ 0.46
KCTD2-204ENST00000579230 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
KCTD2-204ENST00000579230 TARBP1Q13395 1621 aaKnown RBP17.9■□□□□ 0.46
KCTD2-204ENST00000579230 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
KCTD2-204ENST00000579230 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.444e-8■■■■■ 32.3
KCTD2-204ENST00000579230 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
KCTD2-204ENST00000579230 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
KCTD2-204ENST00000579230 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
KCTD2-204ENST00000579230 CYB5RLQ6IPT4 315 aa17.77■□□□□ 0.44
KCTD2-204ENST00000579230 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
KCTD2-204ENST00000579230 CLASP1Q7Z460 1538 aa17.69■□□□□ 0.42
KCTD2-204ENST00000579230 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
KCTD2-204ENST00000579230 SOGA1O94964 1423 aa17.64■□□□□ 0.42
KCTD2-204ENST00000579230 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
KCTD2-204ENST00000579230 TDRD9Q8NDG6 1382 aaKnown RBP17.64■□□□□ 0.41
KCTD2-204ENST00000579230 FBLN2P98095 1184 aa17.63■□□□□ 0.41
KCTD2-204ENST00000579230 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
KCTD2-204ENST00000579230 TRHP20396 242 aaPredicted RBP17.6■□□□□ 0.41
KCTD2-204ENST00000579230 CUX1P39880 1505 aa17.6■□□□□ 0.41
KCTD2-204ENST00000579230 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
KCTD2-204ENST00000579230 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
KCTD2-204ENST00000579230 PBRM1Q86U86 1689 aa17.55■□□□□ 0.4
KCTD2-204ENST00000579230 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
KCTD2-204ENST00000579230 SYNJ2O15056 1496 aa17.53■□□□□ 0.4
KCTD2-204ENST00000579230 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
KCTD2-204ENST00000579230 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
KCTD2-204ENST00000579230 GAPVD1Q14C86 1478 aa17.44■□□□□ 0.38
KCTD2-204ENST00000579230 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
KCTD2-204ENST00000579230 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
KCTD2-204ENST00000579230 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
KCTD2-204ENST00000579230 ADAMTS12P58397 1594 aa17.34■□□□□ 0.37
KCTD2-204ENST00000579230 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
KCTD2-204ENST00000579230 CEP170Q5SW79 1584 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms