RNA–Protein interactions for RNA: ENST00000579205.5

MSI2-207, Transcript of musashi RNA binding protein 2, humanhuman

TSL 4

Gene MSI2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-207ENST00000579205 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
MSI2-207ENST00000579205 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
MSI2-207ENST00000579205 ABCC9O60706 1549 aa28.79■■■□□ 2.2
MSI2-207ENST00000579205 ZCCHC6Q5VYS8 1495 aaKnown RBP28.7■■■□□ 2.18
MSI2-207ENST00000579205 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.14
MSI2-207ENST00000579205 DCAF1Q9Y4B6 1507 aa28.38■■■□□ 2.13
MSI2-207ENST00000579205 MYO15BQ96JP2 1530 aa28.23■■■□□ 2.11
MSI2-207ENST00000579205 NACADO15069 1562 aa28.2■■■□□ 2.1
MSI2-207ENST00000579205 RB1CC1Q8TDY2 1594 aa28.08■■■□□ 2.09
MSI2-207ENST00000579205 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
MSI2-207ENST00000579205 SHROOM4Q9ULL8 1493 aa27.59■■■□□ 2.01
MSI2-207ENST00000579205 UNC13AQ9UPW8 1703 aa27.34■■□□□ 1.97
MSI2-207ENST00000579205 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
MSI2-207ENST00000579205 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
MSI2-207ENST00000579205 BAZ1AQ9NRL2 1556 aaPredicted RBP26.57■■□□□ 1.84
MSI2-207ENST00000579205 CECR2Q9BXF3 1484 aa26.54■■□□□ 1.84
MSI2-207ENST00000579205 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
MSI2-207ENST00000579205 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
MSI2-207ENST00000579205 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
MSI2-207ENST00000579205 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
MSI2-207ENST00000579205 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
MSI2-207ENST00000579205 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
MSI2-207ENST00000579205 WIZO95785 1651 aa26.16■■□□□ 1.78
MSI2-207ENST00000579205 PEG3Q9GZU2 1588 aa26.13■■□□□ 1.77
MSI2-207ENST00000579205 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
MSI2-207ENST00000579205 CC2D2AQ9P2K1 1620 aa26.06■■□□□ 1.76
MSI2-207ENST00000579205 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
MSI2-207ENST00000579205 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
MSI2-207ENST00000579205 NCAPD3P42695 1498 aa25.95■■□□□ 1.74
MSI2-207ENST00000579205 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
MSI2-207ENST00000579205 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
MSI2-207ENST00000579205 DNAJC5BQ9UF47 199 aa25.57■■□□□ 1.68
MSI2-207ENST00000579205 CADPSQ9ULU8 1353 aa25.27■■□□□ 1.64
MSI2-207ENST00000579205 CFTRP13569 1480 aa25.25■■□□□ 1.63
MSI2-207ENST00000579205 LAMC3Q9Y6N6 1575 aa25.22■■□□□ 1.63
MSI2-207ENST00000579205 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
MSI2-207ENST00000579205 NESP48681 1621 aa25.08■■□□□ 1.6
MSI2-207ENST00000579205 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
MSI2-207ENST00000579205 FANCD2Q9BXW9 1451 aa25■■□□□ 1.59
MSI2-207ENST00000579205 CHIC1Q5VXU3 224 aa24.97■■□□□ 1.59
MSI2-207ENST00000579205 CEP164Q9UPV0 1460 aa24.95■■□□□ 1.58
MSI2-207ENST00000579205 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
MSI2-207ENST00000579205 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
MSI2-207ENST00000579205 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
MSI2-207ENST00000579205 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
MSI2-207ENST00000579205 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
MSI2-207ENST00000579205 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
MSI2-207ENST00000579205 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
MSI2-207ENST00000579205 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
MSI2-207ENST00000579205 BIVM-ERCC5R4GMW8 1640 aa24.74■■□□□ 1.55
MSI2-207ENST00000579205 CUX1P39880 1505 aa24.73■■□□□ 1.55
MSI2-207ENST00000579205 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
MSI2-207ENST00000579205 TOPBP1Q92547 1522 aa24.66■■□□□ 1.54
MSI2-207ENST00000579205 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
MSI2-207ENST00000579205 WDR62O43379 1518 aa24.58■■□□□ 1.53
MSI2-207ENST00000579205 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
MSI2-207ENST00000579205 THOC2Q8NI27 1593 aaKnown RBP24.56■■□□□ 1.52
MSI2-207ENST00000579205 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
MSI2-207ENST00000579205 SOGA1O94964 1423 aa24.44■■□□□ 1.5
MSI2-207ENST00000579205 EEA1Q15075 1411 aa24.44■■□□□ 1.5
MSI2-207ENST00000579205 KIF27Q86VH2 1401 aa24.38■■□□□ 1.49
MSI2-207ENST00000579205 IFT140Q96RY7 1462 aa24.37■■□□□ 1.49
MSI2-207ENST00000579205 CUX2O14529 1486 aa24.36■■□□□ 1.49
MSI2-207ENST00000579205 RAD54L2Q9Y4B4 1467 aa24.36■■□□□ 1.49
MSI2-207ENST00000579205 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
MSI2-207ENST00000579205 FAM9AQ8IZU1 332 aaPredicted RBP24.35■■□□□ 1.49
MSI2-207ENST00000579205 TARBP1Q13395 1621 aaKnown RBP24.3■■□□□ 1.48
MSI2-207ENST00000579205 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
MSI2-207ENST00000579205 CSRNP3Q8WYN3 585 aa24.23■■□□□ 1.47
MSI2-207ENST00000579205 RUSC2Q8N2Y8 1516 aa24.23■■□□□ 1.47
MSI2-207ENST00000579205 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
MSI2-207ENST00000579205 ABCA5Q8WWZ7 1642 aa24.19■■□□□ 1.46
MSI2-207ENST00000579205 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
MSI2-207ENST00000579205 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
MSI2-207ENST00000579205 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
MSI2-207ENST00000579205 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
MSI2-207ENST00000579205 PBRM1Q86U86 1689 aa24.09■■□□□ 1.45
MSI2-207ENST00000579205 AQRO60306 1485 aaKnown RBP eCLIP24.09■■□□□ 1.452e-6■■■■■ 26.9
MSI2-207ENST00000579205 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
MSI2-207ENST00000579205 CUL7Q14999 1698 aa24.08■■□□□ 1.45
MSI2-207ENST00000579205 KIF21BO75037 1637 aa24.07■■□□□ 1.44
MSI2-207ENST00000579205 IGF1RP08069 1367 aa24.06■■□□□ 1.44
MSI2-207ENST00000579205 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
MSI2-207ENST00000579205 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
MSI2-207ENST00000579205 PRXQ9BXM0 1461 aa24■■□□□ 1.43
MSI2-207ENST00000579205 EHMT2Q96KQ7 1210 aa23.99■■□□□ 1.43
MSI2-207ENST00000579205 RAPGEF2Q9Y4G8 1499 aa23.97■■□□□ 1.43
MSI2-207ENST00000579205 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
MSI2-207ENST00000579205 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.42
MSI2-207ENST00000579205 LOC105371045A0A1W2PR82 267 aa23.94■■□□□ 1.42
MSI2-207ENST00000579205 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
MSI2-207ENST00000579205 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
MSI2-207ENST00000579205 ADAMTS12P58397 1594 aa23.93■■□□□ 1.42
MSI2-207ENST00000579205 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
MSI2-207ENST00000579205 TNIKQ9UKE5 1360 aa23.82■■□□□ 1.4
MSI2-207ENST00000579205 CHMP7Q8WUX9 453 aaPredicted RBP23.82■■□□□ 1.4
MSI2-207ENST00000579205 FBLN2P98095 1184 aa23.79■■□□□ 1.4
MSI2-207ENST00000579205 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
MSI2-207ENST00000579205 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
MSI2-207ENST00000579205 CHD1O14646 1710 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms