RNA–Protein interactions for RNA: ENST00000579150.1

NDEL1-205, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-205ENST00000579150 NISCHQ9Y2I1 1504 aa26.07■■□□□ 1.76
NDEL1-205ENST00000579150 CCDC180Q9P1Z9 1646 aa23.27■■□□□ 1.32
NDEL1-205ENST00000579150 ABCC9O60706 1549 aa22.9■■□□□ 1.26
NDEL1-205ENST00000579150 RB1CC1Q8TDY2 1594 aa21.99■■□□□ 1.11
NDEL1-205ENST00000579150 NACADO15069 1562 aa21.95■■□□□ 1.11
NDEL1-205ENST00000579150 MYO15BQ96JP2 1530 aa21.82■■□□□ 1.08
NDEL1-205ENST00000579150 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
NDEL1-205ENST00000579150 ZCCHC6Q5VYS8 1495 aaKnown RBP21.65■■□□□ 1.06
NDEL1-205ENST00000579150 DCAF1Q9Y4B6 1507 aa21.62■■□□□ 1.05
NDEL1-205ENST00000579150 UNC13AQ9UPW8 1703 aa21.49■■□□□ 1.03
NDEL1-205ENST00000579150 PABPN1Q86U42 306 aaKnown RBP eCLIP21.38■■□□□ 1.01
NDEL1-205ENST00000579150 BICRAQ9NZM4 1560 aa21.36■■□□□ 1.01
NDEL1-205ENST00000579150 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
NDEL1-205ENST00000579150 SHROOM4Q9ULL8 1493 aa21.16■□□□□ 0.98
NDEL1-205ENST00000579150 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
NDEL1-205ENST00000579150 EIF4G1Q04637 1599 aaKnown RBP20.78■□□□□ 0.92
NDEL1-205ENST00000579150 CC2D2AQ9P2K1 1620 aa20.75■□□□□ 0.91
NDEL1-205ENST00000579150 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
NDEL1-205ENST00000579150 NCAPD3P42695 1498 aa20.29■□□□□ 0.84
NDEL1-205ENST00000579150 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
NDEL1-205ENST00000579150 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
NDEL1-205ENST00000579150 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
NDEL1-205ENST00000579150 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
NDEL1-205ENST00000579150 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
NDEL1-205ENST00000579150 HMGXB3Q12766 1538 aa20.12■□□□□ 0.81
NDEL1-205ENST00000579150 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
NDEL1-205ENST00000579150 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
NDEL1-205ENST00000579150 MROH2BQ7Z745 1585 aa20.06■□□□□ 0.8
NDEL1-205ENST00000579150 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
NDEL1-205ENST00000579150 WIZO95785 1651 aa19.81■□□□□ 0.76
NDEL1-205ENST00000579150 RSF1Q96T23 1441 aaPredicted RBP19.78■□□□□ 0.76
NDEL1-205ENST00000579150 NESP48681 1621 aa19.77■□□□□ 0.76
NDEL1-205ENST00000579150 ERCC6Q03468 1493 aa19.74■□□□□ 0.75
NDEL1-205ENST00000579150 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
NDEL1-205ENST00000579150 CUX2O14529 1486 aa19.7■□□□□ 0.74
NDEL1-205ENST00000579150 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
NDEL1-205ENST00000579150 PDS5BQ9NTI5 1447 aa19.61■□□□□ 0.73
NDEL1-205ENST00000579150 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
NDEL1-205ENST00000579150 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
NDEL1-205ENST00000579150 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
NDEL1-205ENST00000579150 CFTRP13569 1480 aa19.5■□□□□ 0.71
NDEL1-205ENST00000579150 DNAJC5Q9H3Z4 198 aa19.41■□□□□ 0.7
NDEL1-205ENST00000579150 MRC2Q9UBG0 1479 aa19.4■□□□□ 0.7
NDEL1-205ENST00000579150 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
NDEL1-205ENST00000579150 FANCD2Q9BXW9 1451 aa19.38■□□□□ 0.69
NDEL1-205ENST00000579150 WDR62O43379 1518 aa19.36■□□□□ 0.69
NDEL1-205ENST00000579150 CEP164Q9UPV0 1460 aa19.36■□□□□ 0.69
NDEL1-205ENST00000579150 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
NDEL1-205ENST00000579150 URB2Q14146 1524 aaKnown RBP19.21■□□□□ 0.67
NDEL1-205ENST00000579150 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
NDEL1-205ENST00000579150 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
NDEL1-205ENST00000579150 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
NDEL1-205ENST00000579150 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
NDEL1-205ENST00000579150 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
NDEL1-205ENST00000579150 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
NDEL1-205ENST00000579150 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
NDEL1-205ENST00000579150 TARBP1Q13395 1621 aaKnown RBP18.88■□□□□ 0.61
NDEL1-205ENST00000579150 OSCARQ8IYS5 282 aa18.87■□□□□ 0.61
NDEL1-205ENST00000579150 CUX1P39880 1505 aa18.82■□□□□ 0.6
NDEL1-205ENST00000579150 SOGA1O94964 1423 aa18.81■□□□□ 0.6
NDEL1-205ENST00000579150 EIF4G3O43432 1585 aaKnown RBP18.8■□□□□ 0.6
NDEL1-205ENST00000579150 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.6
NDEL1-205ENST00000579150 FGD5Q6ZNL6 1462 aa18.78■□□□□ 0.6
NDEL1-205ENST00000579150 RAD54L2Q9Y4B4 1467 aa18.78■□□□□ 0.6
NDEL1-205ENST00000579150 WDR97A6NE52 1622 aa18.74■□□□□ 0.59
NDEL1-205ENST00000579150 TDRD9Q8NDG6 1382 aaKnown RBP18.71■□□□□ 0.59
NDEL1-205ENST00000579150 ABCA10Q8WWZ4 1543 aa18.64■□□□□ 0.57
NDEL1-205ENST00000579150 WRNQ14191 1432 aaPredicted RBP eCLIP18.63■□□□□ 0.57
NDEL1-205ENST00000579150 TOP2BQ02880 1626 aa18.62■□□□□ 0.57
NDEL1-205ENST00000579150 CHD1O14646 1710 aa18.61■□□□□ 0.57
NDEL1-205ENST00000579150 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
NDEL1-205ENST00000579150 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
NDEL1-205ENST00000579150 MAGI1Q96QZ7 1491 aaPredicted RBP18.59■□□□□ 0.57
NDEL1-205ENST00000579150 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
NDEL1-205ENST00000579150 SNAPC4Q5SXM2 1469 aa18.57■□□□□ 0.56
NDEL1-205ENST00000579150 SYNJ1O43426 1573 aa18.56■□□□□ 0.56
NDEL1-205ENST00000579150 FBLN2P98095 1184 aa18.55■□□□□ 0.56
NDEL1-205ENST00000579150 ABCA5Q8WWZ7 1642 aa18.55■□□□□ 0.56
NDEL1-205ENST00000579150 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
NDEL1-205ENST00000579150 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
NDEL1-205ENST00000579150 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
NDEL1-205ENST00000579150 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
NDEL1-205ENST00000579150 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
NDEL1-205ENST00000579150 SYNJ2O15056 1496 aa18.52■□□□□ 0.55
NDEL1-205ENST00000579150 PBRM1Q86U86 1689 aa18.51■□□□□ 0.55
NDEL1-205ENST00000579150 ARHGEF11O15085 1522 aa18.5■□□□□ 0.55
NDEL1-205ENST00000579150 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
NDEL1-205ENST00000579150 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
NDEL1-205ENST00000579150 FHAD1B1AJZ9 1412 aa18.38■□□□□ 0.53
NDEL1-205ENST00000579150 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
NDEL1-205ENST00000579150 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
NDEL1-205ENST00000579150 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
NDEL1-205ENST00000579150 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
NDEL1-205ENST00000579150 NUP160Q12769 1436 aa18.33■□□□□ 0.53
NDEL1-205ENST00000579150 IGF1RP08069 1367 aa18.27■□□□□ 0.51
NDEL1-205ENST00000579150 CEP170Q5SW79 1584 aa18.26■□□□□ 0.51
NDEL1-205ENST00000579150 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
NDEL1-205ENST00000579150 SHROOM2Q13796 1616 aa18.21■□□□□ 0.51
NDEL1-205ENST00000579150 CUL7Q14999 1698 aa18.16■□□□□ 0.5
NDEL1-205ENST00000579150 JPH4Q96JJ6 628 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms