RNA–Protein interactions for RNA: ENST00000578882.1

APCDD1-203, Transcript of APC down-regulated 1, humanhuman

TSL 3 BASIC

Gene APCDD1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APCDD1-203ENST00000578882 NISCHQ9Y2I1 1504 aa25.04■■□□□ 1.6
APCDD1-203ENST00000578882 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
APCDD1-203ENST00000578882 ABCC9O60706 1549 aa21.75■■□□□ 1.07
APCDD1-203ENST00000578882 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
APCDD1-203ENST00000578882 RB1CC1Q8TDY2 1594 aa20.88■□□□□ 0.93
APCDD1-203ENST00000578882 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
APCDD1-203ENST00000578882 NACADO15069 1562 aa20.85■□□□□ 0.93
APCDD1-203ENST00000578882 MYO15BQ96JP2 1530 aa20.69■□□□□ 0.9
APCDD1-203ENST00000578882 DCAF1Q9Y4B6 1507 aa20.66■□□□□ 0.9
APCDD1-203ENST00000578882 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
APCDD1-203ENST00000578882 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
APCDD1-203ENST00000578882 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
APCDD1-203ENST00000578882 PABPN1Q86U42 306 aaKnown RBP eCLIP20.33■□□□□ 0.85
APCDD1-203ENST00000578882 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
APCDD1-203ENST00000578882 DNAJC5BQ9UF47 199 aa19.94■□□□□ 0.78
APCDD1-203ENST00000578882 EIF4G1Q04637 1599 aaKnown RBP19.75■□□□□ 0.75
APCDD1-203ENST00000578882 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
APCDD1-203ENST00000578882 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
APCDD1-203ENST00000578882 SMARCA4P51532 1647 aa19.45■□□□□ 0.7
APCDD1-203ENST00000578882 BAZ1AQ9NRL2 1556 aaPredicted RBP19.37■□□□□ 0.69
APCDD1-203ENST00000578882 MROH2BQ7Z745 1585 aa19.35■□□□□ 0.69
APCDD1-203ENST00000578882 ATAD2BQ9ULI0 1458 aa19.29■□□□□ 0.68
APCDD1-203ENST00000578882 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
APCDD1-203ENST00000578882 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
APCDD1-203ENST00000578882 PEG3Q9GZU2 1588 aa19.21■□□□□ 0.67
APCDD1-203ENST00000578882 WIZO95785 1651 aa19.17■□□□□ 0.66
APCDD1-203ENST00000578882 HMGXB3Q12766 1538 aa19.16■□□□□ 0.66
APCDD1-203ENST00000578882 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
APCDD1-203ENST00000578882 RSF1Q96T23 1441 aaPredicted RBP19.1■□□□□ 0.65
APCDD1-203ENST00000578882 TOP2AP11388 1531 aaKnown RBP18.9■□□□□ 0.62
APCDD1-203ENST00000578882 NESP48681 1621 aa18.87■□□□□ 0.61
APCDD1-203ENST00000578882 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
APCDD1-203ENST00000578882 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
APCDD1-203ENST00000578882 ERCC6Q03468 1493 aa18.69■□□□□ 0.58
APCDD1-203ENST00000578882 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
APCDD1-203ENST00000578882 KIF21AQ7Z4S6 1674 aa18.68■□□□□ 0.58
APCDD1-203ENST00000578882 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
APCDD1-203ENST00000578882 CFTRP13569 1480 aa18.59■□□□□ 0.57
APCDD1-203ENST00000578882 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
APCDD1-203ENST00000578882 THOC2Q8NI27 1593 aaKnown RBP18.55■□□□□ 0.56
APCDD1-203ENST00000578882 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
APCDD1-203ENST00000578882 FANCD2Q9BXW9 1451 aa18.5■□□□□ 0.55
APCDD1-203ENST00000578882 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.55
APCDD1-203ENST00000578882 CUX2O14529 1486 aa18.43■□□□□ 0.54
APCDD1-203ENST00000578882 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
APCDD1-203ENST00000578882 WDR62O43379 1518 aa18.38■□□□□ 0.53
APCDD1-203ENST00000578882 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
APCDD1-203ENST00000578882 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
APCDD1-203ENST00000578882 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
APCDD1-203ENST00000578882 CUX1P39880 1505 aa18.14■□□□□ 0.49
APCDD1-203ENST00000578882 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
APCDD1-203ENST00000578882 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
APCDD1-203ENST00000578882 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
APCDD1-203ENST00000578882 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
APCDD1-203ENST00000578882 FGD5Q6ZNL6 1462 aa18.05■□□□□ 0.48
APCDD1-203ENST00000578882 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
APCDD1-203ENST00000578882 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
APCDD1-203ENST00000578882 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
APCDD1-203ENST00000578882 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
APCDD1-203ENST00000578882 WRNQ14191 1432 aaPredicted RBP eCLIP17.98■□□□□ 0.47
APCDD1-203ENST00000578882 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
APCDD1-203ENST00000578882 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
APCDD1-203ENST00000578882 SOGA1O94964 1423 aa17.97■□□□□ 0.47
APCDD1-203ENST00000578882 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
APCDD1-203ENST00000578882 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
APCDD1-203ENST00000578882 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
APCDD1-203ENST00000578882 ABCA10Q8WWZ4 1543 aa17.84■□□□□ 0.45
APCDD1-203ENST00000578882 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
APCDD1-203ENST00000578882 PBRM1Q86U86 1689 aa17.82■□□□□ 0.44
APCDD1-203ENST00000578882 ABCA5Q8WWZ7 1642 aa17.82■□□□□ 0.44
APCDD1-203ENST00000578882 CHD1O14646 1710 aa17.78■□□□□ 0.44
APCDD1-203ENST00000578882 GAPVD1Q14C86 1478 aa17.77■□□□□ 0.44
APCDD1-203ENST00000578882 SNAPC4Q5SXM2 1469 aa17.76■□□□□ 0.43
APCDD1-203ENST00000578882 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
APCDD1-203ENST00000578882 MAGI1Q96QZ7 1491 aaPredicted RBP17.68■□□□□ 0.42
APCDD1-203ENST00000578882 FBLN2P98095 1184 aa17.67■□□□□ 0.42
APCDD1-203ENST00000578882 OSCARQ8IYS5 282 aa17.66■□□□□ 0.42
APCDD1-203ENST00000578882 ADAMTS12P58397 1594 aa17.64■□□□□ 0.41
APCDD1-203ENST00000578882 SYNJ2O15056 1496 aa17.63■□□□□ 0.41
APCDD1-203ENST00000578882 ERICH3Q5RHP9 1530 aa17.62■□□□□ 0.41
APCDD1-203ENST00000578882 CHMP7Q8WUX9 453 aaPredicted RBP17.59■□□□□ 0.41
APCDD1-203ENST00000578882 TRIM41Q8WV44 630 aa17.59■□□□□ 0.41
APCDD1-203ENST00000578882 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
APCDD1-203ENST00000578882 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
APCDD1-203ENST00000578882 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
APCDD1-203ENST00000578882 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
APCDD1-203ENST00000578882 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
APCDD1-203ENST00000578882 IGF1RP08069 1367 aa17.53■□□□□ 0.4
APCDD1-203ENST00000578882 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
APCDD1-203ENST00000578882 CUL7Q14999 1698 aa17.49■□□□□ 0.39
APCDD1-203ENST00000578882 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
APCDD1-203ENST00000578882 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
APCDD1-203ENST00000578882 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
APCDD1-203ENST00000578882 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
APCDD1-203ENST00000578882 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
APCDD1-203ENST00000578882 NUP160Q12769 1436 aa17.45■□□□□ 0.38
APCDD1-203ENST00000578882 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
APCDD1-203ENST00000578882 ERCC6L2Q5T890 1561 aa17.36■□□□□ 0.37
APCDD1-203ENST00000578882 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
APCDD1-203ENST00000578882 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms