RNA–Protein interactions for RNA: ENST00000577596.5

DHX40-205, Transcript of DEAH-box helicase 40, humanhuman

TSL 5

Gene DHX40, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-205ENST00000577596 NISCHQ9Y2I1 1504 aa33.85■■■■□ 3.01
DHX40-205ENST00000577596 AEBP2Q6ZN18 517 aaPredicted RBP33.07■■■□□ 2.88
DHX40-205ENST00000577596 CHIC1Q5VXU3 224 aa31.79■■■□□ 2.68
DHX40-205ENST00000577596 ABCC9O60706 1549 aa31.16■■■□□ 2.58
DHX40-205ENST00000577596 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
DHX40-205ENST00000577596 DNAJC5BQ9UF47 199 aa29.72■■■□□ 2.35
DHX40-205ENST00000577596 RB1CC1Q8TDY2 1594 aa29.39■■■□□ 2.29
DHX40-205ENST00000577596 NACADO15069 1562 aa29.05■■■□□ 2.24
DHX40-205ENST00000577596 PABPN1Q86U42 306 aaKnown RBP eCLIP28.95■■■□□ 2.22
DHX40-205ENST00000577596 DCAF8L2P0C7V8 631 aa28.88■■■□□ 2.21
DHX40-205ENST00000577596 UNC13AQ9UPW8 1703 aa28.71■■■□□ 2.19
DHX40-205ENST00000577596 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
DHX40-205ENST00000577596 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
DHX40-205ENST00000577596 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
DHX40-205ENST00000577596 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
DHX40-205ENST00000577596 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
DHX40-205ENST00000577596 PHF23Q9BUL5 403 aaPredicted RBP28.04■■■□□ 2.08
DHX40-205ENST00000577596 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
DHX40-205ENST00000577596 SENP3Q9H4L4 574 aaPredicted RBP27.91■■■□□ 2.06
DHX40-205ENST00000577596 EIF4G1Q04637 1599 aaKnown RBP27.9■■■□□ 2.06
DHX40-205ENST00000577596 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
DHX40-205ENST00000577596 SCRIBQ14160 1630 aa27.88■■■□□ 2.05
DHX40-205ENST00000577596 DNAJC5Q9H3Z4 198 aa27.65■■■□□ 2.02
DHX40-205ENST00000577596 CUX2O14529 1486 aa27.04■■□□□ 1.92
DHX40-205ENST00000577596 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
DHX40-205ENST00000577596 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
DHX40-205ENST00000577596 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
DHX40-205ENST00000577596 NESP48681 1621 aa26.61■■□□□ 1.85
DHX40-205ENST00000577596 HMGXB3Q12766 1538 aa26.57■■□□□ 1.84
DHX40-205ENST00000577596 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
DHX40-205ENST00000577596 SMARCA4P51532 1647 aa26.52■■□□□ 1.84
DHX40-205ENST00000577596 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
DHX40-205ENST00000577596 BAZ1BQ9UIG0 1483 aaKnown RBP26.41■■□□□ 1.82
DHX40-205ENST00000577596 LAMC3Q9Y6N6 1575 aa26.31■■□□□ 1.8
DHX40-205ENST00000577596 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
DHX40-205ENST00000577596 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
DHX40-205ENST00000577596 PEG3Q9GZU2 1588 aa26.24■■□□□ 1.79
DHX40-205ENST00000577596 KIF21AQ7Z4S6 1674 aa26.23■■□□□ 1.79
DHX40-205ENST00000577596 PDS5BQ9NTI5 1447 aa26.19■■□□□ 1.78
DHX40-205ENST00000577596 FOXD1Q16676 465 aa26.1■■□□□ 1.77
DHX40-205ENST00000577596 MROH2BQ7Z745 1585 aa26.09■■□□□ 1.77
DHX40-205ENST00000577596 CADPSQ9ULU8 1353 aa26.01■■□□□ 1.75
DHX40-205ENST00000577596 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
DHX40-205ENST00000577596 WDR62O43379 1518 aa25.93■■□□□ 1.74
DHX40-205ENST00000577596 CEP164Q9UPV0 1460 aa25.79■■□□□ 1.72
DHX40-205ENST00000577596 WIZO95785 1651 aa25.75■■□□□ 1.71
DHX40-205ENST00000577596 OSCARQ8IYS5 282 aa25.75■■□□□ 1.71
DHX40-205ENST00000577596 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
DHX40-205ENST00000577596 CFTRP13569 1480 aa25.59■■□□□ 1.69
DHX40-205ENST00000577596 PLPPR3Q6T4P5 718 aa25.56■■□□□ 1.68
DHX40-205ENST00000577596 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
DHX40-205ENST00000577596 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
DHX40-205ENST00000577596 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
DHX40-205ENST00000577596 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
DHX40-205ENST00000577596 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
DHX40-205ENST00000577596 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
DHX40-205ENST00000577596 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
DHX40-205ENST00000577596 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
DHX40-205ENST00000577596 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
DHX40-205ENST00000577596 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
DHX40-205ENST00000577596 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
DHX40-205ENST00000577596 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
DHX40-205ENST00000577596 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
DHX40-205ENST00000577596 TRHP20396 242 aaPredicted RBP25.12■■□□□ 1.61
DHX40-205ENST00000577596 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
DHX40-205ENST00000577596 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
DHX40-205ENST00000577596 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
DHX40-205ENST00000577596 CHD1O14646 1710 aa25.04■■□□□ 1.6
DHX40-205ENST00000577596 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
DHX40-205ENST00000577596 DNMBPQ6XZF7 1577 aa25.01■■□□□ 1.59
DHX40-205ENST00000577596 FBLN2P98095 1184 aa25■■□□□ 1.59
DHX40-205ENST00000577596 TARBP1Q13395 1621 aaKnown RBP24.97■■□□□ 1.59
DHX40-205ENST00000577596 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
DHX40-205ENST00000577596 POLA1P09884 1462 aaPredicted RBP24.88■■□□□ 1.57
DHX40-205ENST00000577596 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
DHX40-205ENST00000577596 ADRA2BP18089 450 aa24.8■■□□□ 1.56
DHX40-205ENST00000577596 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
DHX40-205ENST00000577596 SOGA1O94964 1423 aa24.77■■□□□ 1.56
DHX40-205ENST00000577596 SNAPC4Q5SXM2 1469 aa24.76■■□□□ 1.55
DHX40-205ENST00000577596 CLASP1Q7Z460 1538 aa24.75■■□□□ 1.55
DHX40-205ENST00000577596 CHMP7Q8WUX9 453 aaPredicted RBP24.71■■□□□ 1.55
DHX40-205ENST00000577596 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
DHX40-205ENST00000577596 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
DHX40-205ENST00000577596 WDR97A6NE52 1622 aa24.65■■□□□ 1.54
DHX40-205ENST00000577596 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.54
DHX40-205ENST00000577596 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
DHX40-205ENST00000577596 SYNJ2O15056 1496 aa24.58■■□□□ 1.52
DHX40-205ENST00000577596 CUX1P39880 1505 aa24.55■■□□□ 1.52
DHX40-205ENST00000577596 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
DHX40-205ENST00000577596 PIAS4Q8N2W9 510 aaPredicted RBP24.45■■□□□ 1.5
DHX40-205ENST00000577596 PBRM1Q86U86 1689 aa24.45■■□□□ 1.5
DHX40-205ENST00000577596 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
DHX40-205ENST00000577596 ABCA5Q8WWZ7 1642 aa24.33■■□□□ 1.49
DHX40-205ENST00000577596 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
DHX40-205ENST00000577596 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
DHX40-205ENST00000577596 CEP170Q5SW79 1584 aa24.25■■□□□ 1.47
DHX40-205ENST00000577596 NUP160Q12769 1436 aa24.21■■□□□ 1.47
DHX40-205ENST00000577596 ADAMTS12P58397 1594 aa24.19■■□□□ 1.46
DHX40-205ENST00000577596 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
DHX40-205ENST00000577596 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms